RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 PTCH1Q13635 1447 aa12.49□□□□□ -0.41
NPIPB4-210ENST00000539191 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
NPIPB4-210ENST00000539191 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
NPIPB4-210ENST00000539191 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
NPIPB4-210ENST00000539191 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
NPIPB4-210ENST00000539191 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
NPIPB4-210ENST00000539191 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
NPIPB4-210ENST00000539191 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
NPIPB4-210ENST00000539191 USP21Q9UK80 565 aa12.48□□□□□ -0.41
NPIPB4-210ENST00000539191 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
NPIPB4-210ENST00000539191 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
NPIPB4-210ENST00000539191 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
NPIPB4-210ENST00000539191 PXDNQ92626 1479 aa12.46□□□□□ -0.41
NPIPB4-210ENST00000539191 FOXO3O43524 673 aa12.46□□□□□ -0.41
NPIPB4-210ENST00000539191 HFM1A2PYH4 1435 aa12.45□□□□□ -0.42
NPIPB4-210ENST00000539191 CDC42BPGQ6DT37 1551 aa12.45□□□□□ -0.42
NPIPB4-210ENST00000539191 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
NPIPB4-210ENST00000539191 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
NPIPB4-210ENST00000539191 MYOM2P54296 1465 aa12.44□□□□□ -0.42
NPIPB4-210ENST00000539191 BCL9LQ86UU0 1499 aa12.43□□□□□ -0.42
NPIPB4-210ENST00000539191 ATRNO75882 1429 aa12.43□□□□□ -0.42
NPIPB4-210ENST00000539191 CABLES1Q8TDN4 633 aa12.42□□□□□ -0.42
NPIPB4-210ENST00000539191 GLI3P10071 1580 aa12.42□□□□□ -0.42
NPIPB4-210ENST00000539191 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
NPIPB4-210ENST00000539191 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPIPB4-210ENST00000539191 SPATA31E1Q6ZUB1 1445 aa12.41□□□□□ -0.42
NPIPB4-210ENST00000539191 ABCA3Q99758 1704 aa12.41□□□□□ -0.42
NPIPB4-210ENST00000539191 FNBP4Q8N3X1 1017 aaPredicted RBP12.4□□□□□ -0.42
NPIPB4-210ENST00000539191 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
NPIPB4-210ENST00000539191 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
NPIPB4-210ENST00000539191 PLCH1Q4KWH8 1693 aa12.39□□□□□ -0.43
NPIPB4-210ENST00000539191 CCDC144AA2RUR9 1427 aa12.39□□□□□ -0.43
NPIPB4-210ENST00000539191 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
NPIPB4-210ENST00000539191 RPGRIP1LQ68CZ1 1315 aa12.38□□□□□ -0.43
NPIPB4-210ENST00000539191 USP32Q8NFA0 1604 aa12.38□□□□□ -0.43
NPIPB4-210ENST00000539191 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 MPHOSPH9Q99550 1183 aa12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
NPIPB4-210ENST00000539191 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
NPIPB4-210ENST00000539191 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
NPIPB4-210ENST00000539191 TECPR2O15040 1411 aa12.36□□□□□ -0.43
NPIPB4-210ENST00000539191 CFAP70Q5T0N1 1121 aa12.35□□□□□ -0.43
NPIPB4-210ENST00000539191 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
NPIPB4-210ENST00000539191 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
NPIPB4-210ENST00000539191 KRT28Q7Z3Y7 464 aa12.34□□□□□ -0.43
NPIPB4-210ENST00000539191 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
NPIPB4-210ENST00000539191 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
NPIPB4-210ENST00000539191 SLIT2O94813 1529 aa12.33□□□□□ -0.44
NPIPB4-210ENST00000539191 HIRIP3Q9BW71 556 aaPredicted RBP12.33□□□□□ -0.44
NPIPB4-210ENST00000539191 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
NPIPB4-210ENST00000539191 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
NPIPB4-210ENST00000539191 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 PRAM1Q96QH2 718 aa12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 CCDC9Q9Y3X0 531 aaKnown RBP12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
NPIPB4-210ENST00000539191 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
NPIPB4-210ENST00000539191 TNS3Q68CZ2 1445 aa12.3□□□□□ -0.44
NPIPB4-210ENST00000539191 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
NPIPB4-210ENST00000539191 SEPT12Q8IYM1 358 aa12.29□□□□□ -0.44
NPIPB4-210ENST00000539191 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
NPIPB4-210ENST00000539191 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 A0A0G2JS52 829 aa12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 MYT1Q01538 1121 aa12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
NPIPB4-210ENST00000539191 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.44
NPIPB4-210ENST00000539191 ALS2Q96Q42 1657 aa12.27□□□□□ -0.45
NPIPB4-210ENST00000539191 FAM83GA6ND36 823 aa12.27□□□□□ -0.45
NPIPB4-210ENST00000539191 TRAK1Q9UPV9 953 aa12.27□□□□□ -0.45
NPIPB4-210ENST00000539191 PRR36Q9H6K5 1346 aa12.27□□□□□ -0.45
NPIPB4-210ENST00000539191 ADGRB1O14514 1584 aa12.26□□□□□ -0.45
NPIPB4-210ENST00000539191 PSME1Q06323 249 aa12.26□□□□□ -0.45
NPIPB4-210ENST00000539191 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
NPIPB4-210ENST00000539191 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
NPIPB4-210ENST00000539191 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
NPIPB4-210ENST00000539191 POGKQ9P215 609 aa12.25□□□□□ -0.45
NPIPB4-210ENST00000539191 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
NPIPB4-210ENST00000539191 ARHGEF28Q8N1W1 1705 aaKnown RBP12.24□□□□□ -0.45
NPIPB4-210ENST00000539191 RAB3GAP2Q9H2M9 1393 aa12.24□□□□□ -0.45
NPIPB4-210ENST00000539191 BTG4Q9NY30 223 aa12.24□□□□□ -0.45
NPIPB4-210ENST00000539191 ADGRB2O60241 1585 aa12.23□□□□□ -0.45
NPIPB4-210ENST00000539191 VPS72Q15906 364 aa12.23□□□□□ -0.45
NPIPB4-210ENST00000539191 NUTM2GQ5VZR2 741 aa12.23□□□□□ -0.45
NPIPB4-210ENST00000539191 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
NPIPB4-210ENST00000539191 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
NPIPB4-210ENST00000539191 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
NPIPB4-210ENST00000539191 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
NPIPB4-210ENST00000539191 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
NPIPB4-210ENST00000539191 CHRNA2Q15822 529 aa12.21□□□□□ -0.45
NPIPB4-210ENST00000539191 PHRF1Q9P1Y6 1649 aaKnown RBP12.21□□□□□ -0.46
NPIPB4-210ENST00000539191 DLC1Q96QB1 1528 aa12.21□□□□□ -0.46
NPIPB4-210ENST00000539191 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms