RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
VAMP1-207ENST00000539047 EVC2Q86UK5 1308 aa21.32■■□□□ 1
VAMP1-207ENST00000539047 C11orf95C9JLR9 678 aaPredicted RBP21.32■■□□□ 1
VAMP1-207ENST00000539047 NWD1Q149M9 1564 aa21.3■■□□□ 1
VAMP1-207ENST00000539047 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
VAMP1-207ENST00000539047 TULP4Q9NRJ4 1543 aa21.29■■□□□ 1
VAMP1-207ENST00000539047 PTPRUQ92729 1446 aa21.29■■□□□ 1
VAMP1-207ENST00000539047 MYOM1P52179 1685 aa21.28■■□□□ 1
VAMP1-207ENST00000539047 ADGRB2O60241 1585 aa21.28■■□□□ 1
VAMP1-207ENST00000539047 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
VAMP1-207ENST00000539047 MINK1Q8N4C8 1332 aaPredicted RBP21.27■□□□□ 0.99
VAMP1-207ENST00000539047 ROBO2Q9HCK4 1378 aa21.25■□□□□ 0.99
VAMP1-207ENST00000539047 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
VAMP1-207ENST00000539047 NKTRP30414 1462 aaKnown RBP21.24■□□□□ 0.99
VAMP1-207ENST00000539047 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
VAMP1-207ENST00000539047 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
VAMP1-207ENST00000539047 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
VAMP1-207ENST00000539047 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
VAMP1-207ENST00000539047 NINLQ9Y2I6 1382 aa21.22■□□□□ 0.99
VAMP1-207ENST00000539047 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.21■□□□□ 0.99
VAMP1-207ENST00000539047 ITSN1Q15811 1721 aa21.21■□□□□ 0.99
VAMP1-207ENST00000539047 KCNA6P17658 529 aa21.19■□□□□ 0.98
VAMP1-207ENST00000539047 NALCNQ8IZF0 1738 aa21.18■□□□□ 0.98
VAMP1-207ENST00000539047 ANP32CO43423 234 aa21.18■□□□□ 0.98
VAMP1-207ENST00000539047 LTBP4Q8N2S1 1624 aa21.18■□□□□ 0.98
VAMP1-207ENST00000539047 ZNF335Q9H4Z2 1342 aaPredicted RBP21.16■□□□□ 0.98
VAMP1-207ENST00000539047 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
VAMP1-207ENST00000539047 CDK19Q9BWU1 502 aa21.15■□□□□ 0.98
VAMP1-207ENST00000539047 WASLO00401 505 aaPredicted RBP21.14■□□□□ 0.97
VAMP1-207ENST00000539047 TMC1Q8TDI8 760 aa21.14■□□□□ 0.97
VAMP1-207ENST00000539047 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
VAMP1-207ENST00000539047 FMN2Q9NZ56 1722 aa21.14■□□□□ 0.97
VAMP1-207ENST00000539047 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
VAMP1-207ENST00000539047 C14orf37Q86TY3 774 aa21.12■□□□□ 0.97
VAMP1-207ENST00000539047 STRCP1A6NGW2 1772 aa21.12■□□□□ 0.97
VAMP1-207ENST00000539047 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
VAMP1-207ENST00000539047 PANK3Q9H999 370 aa21.1■□□□□ 0.97
VAMP1-207ENST00000539047 ATP7BP35670 1465 aa21.09■□□□□ 0.97
VAMP1-207ENST00000539047 PROSER2Q86WR7 435 aaPredicted RBP21.09■□□□□ 0.97
VAMP1-207ENST00000539047 USP32Q8NFA0 1604 aa21.08■□□□□ 0.97
VAMP1-207ENST00000539047 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
VAMP1-207ENST00000539047 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.97
VAMP1-207ENST00000539047 ANKRD36BQ8N2N9 1353 aa21.08■□□□□ 0.96
VAMP1-207ENST00000539047 ANKARQ7Z5J8 1434 aa21.07■□□□□ 0.96
VAMP1-207ENST00000539047 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
VAMP1-207ENST00000539047 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
VAMP1-207ENST00000539047 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
VAMP1-207ENST00000539047 AKAP12Q02952 1782 aa21.06■□□□□ 0.96
VAMP1-207ENST00000539047 HDGFL2Q7Z4V5 671 aaPredicted RBP21.06■□□□□ 0.96
VAMP1-207ENST00000539047 ILDR2Q71H61 639 aa21.05■□□□□ 0.96
VAMP1-207ENST00000539047 MIER1Q8N108 512 aa21.05■□□□□ 0.96
VAMP1-207ENST00000539047 NUDT16Q96DE0 195 aaKnown RBP21.04■□□□□ 0.96
VAMP1-207ENST00000539047 RGPD8O14715 1765 aaPredicted RBP21.04■□□□□ 0.96
VAMP1-207ENST00000539047 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
VAMP1-207ENST00000539047 SLC12A5Q9H2X9 1139 aa21.03■□□□□ 0.96
VAMP1-207ENST00000539047 CCDC61Q9Y6R9 512 aa21.03■□□□□ 0.96
VAMP1-207ENST00000539047 KIF20BQ96Q89 1820 aa21.03■□□□□ 0.96
VAMP1-207ENST00000539047 IQSEC2Q5JU85 1478 aa21.02■□□□□ 0.96
VAMP1-207ENST00000539047 UBAP1LF5GYI3 381 aa21.02■□□□□ 0.96
VAMP1-207ENST00000539047 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
VAMP1-207ENST00000539047 DCCP43146 1447 aa21.01■□□□□ 0.95
VAMP1-207ENST00000539047 A0A1W2PP64 1363 aa21■□□□□ 0.95
VAMP1-207ENST00000539047 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
VAMP1-207ENST00000539047 ANKRD26Q9UPS8 1709 aa21■□□□□ 0.95
VAMP1-207ENST00000539047 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
VAMP1-207ENST00000539047 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
VAMP1-207ENST00000539047 MSH6P52701 1360 aa20.98■□□□□ 0.95
VAMP1-207ENST00000539047 NPC1L1Q9UHC9 1359 aa20.98■□□□□ 0.95
VAMP1-207ENST00000539047 RALBP1Q15311 655 aa20.98■□□□□ 0.95
VAMP1-207ENST00000539047 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
VAMP1-207ENST00000539047 CGNL1Q0VF96 1302 aa20.98■□□□□ 0.95
VAMP1-207ENST00000539047 KIF1AQ12756 1690 aa20.97■□□□□ 0.95
VAMP1-207ENST00000539047 PER1O15534 1290 aaPredicted RBP20.97■□□□□ 0.95
VAMP1-207ENST00000539047 NSD2O96028 1365 aa20.97■□□□□ 0.95
VAMP1-207ENST00000539047 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
VAMP1-207ENST00000539047 SOCS7O14512 581 aa20.96■□□□□ 0.95
VAMP1-207ENST00000539047 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
VAMP1-207ENST00000539047 C19orf44Q9H6X5 657 aa20.96■□□□□ 0.95
VAMP1-207ENST00000539047 PRR36Q9H6K5 1346 aa20.96■□□□□ 0.95
VAMP1-207ENST00000539047 LRRC7Q96NW7 1537 aa20.95■□□□□ 0.94
VAMP1-207ENST00000539047 NUTM2FA1L443 756 aa20.95■□□□□ 0.94
VAMP1-207ENST00000539047 CCER2I3L3R5 266 aa20.95■□□□□ 0.94
VAMP1-207ENST00000539047 ATF3P18847 181 aa20.95■□□□□ 0.94
VAMP1-207ENST00000539047 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
VAMP1-207ENST00000539047 EDC4Q6P2E9 1401 aaKnown RBP20.95■□□□□ 0.94
VAMP1-207ENST00000539047 CC2D1BQ5T0F9 858 aaKnown RBP20.94■□□□□ 0.94
VAMP1-207ENST00000539047 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
VAMP1-207ENST00000539047 NRKQ7Z2Y5 1582 aa20.93■□□□□ 0.94
VAMP1-207ENST00000539047 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
VAMP1-207ENST00000539047 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
VAMP1-207ENST00000539047 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
VAMP1-207ENST00000539047 AMER1Q5JTC6 1135 aaPredicted RBP20.91■□□□□ 0.94
VAMP1-207ENST00000539047 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
VAMP1-207ENST00000539047 MYBBP1AQ9BQG0 1328 aaKnown RBP20.91■□□□□ 0.94
VAMP1-207ENST00000539047 CARD14Q9BXL6 1004 aa20.91■□□□□ 0.94
VAMP1-207ENST00000539047 NGDNQ8NEJ9 315 aaKnown RBP20.9■□□□□ 0.94
VAMP1-207ENST00000539047 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
VAMP1-207ENST00000539047 ACEP12821 1306 aa20.88■□□□□ 0.93
VAMP1-207ENST00000539047 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
VAMP1-207ENST00000539047 USP6P35125 1406 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms