RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 UPF1Q92900 1129 aaKnown RBP eCLIP19.73■□□□□ 0.75
CD4-208ENST00000538827 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
CD4-208ENST00000538827 TECPR2O15040 1411 aa19.72■□□□□ 0.75
CD4-208ENST00000538827 SAFB2Q14151 953 aaKnown RBP eCLIP19.72■□□□□ 0.75
CD4-208ENST00000538827 POGKQ9P215 609 aa19.72■□□□□ 0.75
CD4-208ENST00000538827 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
CD4-208ENST00000538827 PRAM1Q96QH2 718 aa19.71■□□□□ 0.75
CD4-208ENST00000538827 PIK3R4Q99570 1358 aa19.7■□□□□ 0.74
CD4-208ENST00000538827 TESK2Q96S53 571 aa19.7■□□□□ 0.74
CD4-208ENST00000538827 KIF7Q2M1P5 1343 aa19.7■□□□□ 0.74
CD4-208ENST00000538827 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
CD4-208ENST00000538827 TMF1P82094 1093 aa19.69■□□□□ 0.74
CD4-208ENST00000538827 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
CD4-208ENST00000538827 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
CD4-208ENST00000538827 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
CD4-208ENST00000538827 TULP4Q9NRJ4 1543 aa19.68■□□□□ 0.74
CD4-208ENST00000538827 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
CD4-208ENST00000538827 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
CD4-208ENST00000538827 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
CD4-208ENST00000538827 AMOTL2Q9Y2J4 779 aa19.67■□□□□ 0.74
CD4-208ENST00000538827 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
CD4-208ENST00000538827 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
CD4-208ENST00000538827 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
CD4-208ENST00000538827 JCADQ9P266 1359 aa19.64■□□□□ 0.73
CD4-208ENST00000538827 MYOM1P52179 1685 aa19.64■□□□□ 0.73
CD4-208ENST00000538827 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.63■□□□□ 0.73
CD4-208ENST00000538827 TMEM94Q12767 1356 aa19.63■□□□□ 0.73
CD4-208ENST00000538827 ZNF772Q68DY9 489 aaPredicted RBP19.63■□□□□ 0.73
CD4-208ENST00000538827 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
CD4-208ENST00000538827 KCNA6P17658 529 aa19.62■□□□□ 0.73
CD4-208ENST00000538827 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
CD4-208ENST00000538827 ROBO1Q9Y6N7 1651 aa19.62■□□□□ 0.73
CD4-208ENST00000538827 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
CD4-208ENST00000538827 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
CD4-208ENST00000538827 NALCNQ8IZF0 1738 aa19.61■□□□□ 0.73
CD4-208ENST00000538827 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
CD4-208ENST00000538827 DIEXFQ68CQ4 756 aaKnown RBP19.6■□□□□ 0.73
CD4-208ENST00000538827 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
CD4-208ENST00000538827 SIRT1Q96EB6 747 aa19.59■□□□□ 0.73
CD4-208ENST00000538827 PROSER2Q86WR7 435 aaPredicted RBP19.58■□□□□ 0.72
CD4-208ENST00000538827 SPATA31A6Q5VVP1 1343 aa19.56■□□□□ 0.72
CD4-208ENST00000538827 SRPK2P78362 688 aaKnown RBP19.56■□□□□ 0.72
CD4-208ENST00000538827 SRCAPQ6ZRS2 3230 aa19.55■□□□□ 0.72
CD4-208ENST00000538827 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
CD4-208ENST00000538827 RXRBP28702 533 aa19.54■□□□□ 0.72
CD4-208ENST00000538827 MEX3CQ5U5Q3 659 aaKnown RBP19.54■□□□□ 0.72
CD4-208ENST00000538827 CABP2Q9NPB3 220 aa19.53■□□□□ 0.72
CD4-208ENST00000538827 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
CD4-208ENST00000538827 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
CD4-208ENST00000538827 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
CD4-208ENST00000538827 MSH6P52701 1360 aa19.52■□□□□ 0.72
CD4-208ENST00000538827 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
CD4-208ENST00000538827 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
CD4-208ENST00000538827 RBM33Q96EV2 1170 aaKnown RBP19.51■□□□□ 0.71
CD4-208ENST00000538827 ATAD2Q6PL18 1390 aa19.51■□□□□ 0.71
CD4-208ENST00000538827 ITSN1Q15811 1721 aa19.51■□□□□ 0.71
CD4-208ENST00000538827 ADGRL3Q9HAR2 1447 aa19.51■□□□□ 0.71
CD4-208ENST00000538827 TOPAZ1Q8N9V7 1692 aa19.5■□□□□ 0.71
CD4-208ENST00000538827 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
CD4-208ENST00000538827 WASLO00401 505 aaPredicted RBP19.49■□□□□ 0.71
CD4-208ENST00000538827 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
CD4-208ENST00000538827 ATP7BP35670 1465 aa19.48■□□□□ 0.71
CD4-208ENST00000538827 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
CD4-208ENST00000538827 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
CD4-208ENST00000538827 LRP6O75581 1613 aa19.45■□□□□ 0.7
CD4-208ENST00000538827 PUS7Q96PZ0 661 aaKnown RBP19.45■□□□□ 0.7
CD4-208ENST00000538827 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
CD4-208ENST00000538827 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
CD4-208ENST00000538827 PPIP5K1Q6PFW1 1433 aa19.43■□□□□ 0.7
CD4-208ENST00000538827 PANK3Q9H999 370 aa19.43■□□□□ 0.7
CD4-208ENST00000538827 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
CD4-208ENST00000538827 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
CD4-208ENST00000538827 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
CD4-208ENST00000538827 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
CD4-208ENST00000538827 NUDT16Q96DE0 195 aaKnown RBP19.41■□□□□ 0.7
CD4-208ENST00000538827 SLC12A5Q9H2X9 1139 aa19.41■□□□□ 0.7
CD4-208ENST00000538827 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
CD4-208ENST00000538827 ANKRD36BQ8N2N9 1353 aa19.4■□□□□ 0.7
CD4-208ENST00000538827 NCOA3Q9Y6Q9 1424 aa19.39■□□□□ 0.69
CD4-208ENST00000538827 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.69
CD4-208ENST00000538827 A0A1W2PP64 1363 aa19.38■□□□□ 0.69
CD4-208ENST00000538827 ANP32CO43423 234 aa19.38■□□□□ 0.69
CD4-208ENST00000538827 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
CD4-208ENST00000538827 KIF20BQ96Q89 1820 aa19.37■□□□□ 0.69
CD4-208ENST00000538827 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
CD4-208ENST00000538827 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
CD4-208ENST00000538827 DCCP43146 1447 aa19.36■□□□□ 0.69
CD4-208ENST00000538827 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
CD4-208ENST00000538827 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
CD4-208ENST00000538827 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
CD4-208ENST00000538827 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
CD4-208ENST00000538827 CADPS2Q86UW7 1296 aa19.34■□□□□ 0.69
CD4-208ENST00000538827 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
CD4-208ENST00000538827 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
CD4-208ENST00000538827 KIF1AQ12756 1690 aa19.33■□□□□ 0.69
CD4-208ENST00000538827 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.69
CD4-208ENST00000538827 AFF2P51816 1311 aa19.33■□□□□ 0.69
CD4-208ENST00000538827 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.69
CD4-208ENST00000538827 ATF3P18847 181 aa19.33■□□□□ 0.68
CD4-208ENST00000538827 RBM6P78332 1123 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms