RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
SFSWAP-207ENST00000538548 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
SFSWAP-207ENST00000538548 C22orf23Q9BZE7 217 aa23.55■■□□□ 1.36
SFSWAP-207ENST00000538548 ESPNB1AK53 854 aa23.54■■□□□ 1.36
SFSWAP-207ENST00000538548 RLBP1P12271 317 aa23.54■■□□□ 1.36
SFSWAP-207ENST00000538548 ZMYND15Q9H091 742 aa23.54■■□□□ 1.36
SFSWAP-207ENST00000538548 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
SFSWAP-207ENST00000538548 POLR3AO14802 1390 aaPredicted RBP23.53■■□□□ 1.36
SFSWAP-207ENST00000538548 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
SFSWAP-207ENST00000538548 EFCAB2Q5VUJ9 269 aa23.53■■□□□ 1.36
SFSWAP-207ENST00000538548 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
SFSWAP-207ENST00000538548 NPM1P06748 294 aaKnown RBP eCLIP23.51■■□□□ 1.35
SFSWAP-207ENST00000538548 ASXL2Q76L83 1435 aa23.5■■□□□ 1.35
SFSWAP-207ENST00000538548 CEP152O94986 1710 aa23.5■■□□□ 1.35
SFSWAP-207ENST00000538548 PLCH2O75038 1416 aa23.49■■□□□ 1.35
SFSWAP-207ENST00000538548 ZNF692Q9BU19 519 aaPredicted RBP23.48■■□□□ 1.35
SFSWAP-207ENST00000538548 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
SFSWAP-207ENST00000538548 SLC24A1O60721 1099 aa23.48■■□□□ 1.35
SFSWAP-207ENST00000538548 HSCBQ8IWL3 235 aa23.47■■□□□ 1.35
SFSWAP-207ENST00000538548 TNNQ9UQP3 1299 aa23.47■■□□□ 1.35
SFSWAP-207ENST00000538548 MFAP1P55081 439 aaKnown RBP23.47■■□□□ 1.35
SFSWAP-207ENST00000538548 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
SFSWAP-207ENST00000538548 ERBB4Q15303 1308 aa23.47■■□□□ 1.35
SFSWAP-207ENST00000538548 PHF23Q9BUL5 403 aaPredicted RBP23.46■■□□□ 1.35
SFSWAP-207ENST00000538548 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
SFSWAP-207ENST00000538548 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
SFSWAP-207ENST00000538548 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
SFSWAP-207ENST00000538548 CARD14Q9BXL6 1004 aa23.45■■□□□ 1.34
SFSWAP-207ENST00000538548 IQSEC2Q5JU85 1478 aa23.44■■□□□ 1.34
SFSWAP-207ENST00000538548 MVPQ14764 893 aaKnown RBP23.44■■□□□ 1.34
SFSWAP-207ENST00000538548 DDIT3P35638 169 aa23.44■■□□□ 1.34
SFSWAP-207ENST00000538548 TRPM2O94759 1503 aa23.43■■□□□ 1.34
SFSWAP-207ENST00000538548 SHPRHQ149N8 1683 aa23.43■■□□□ 1.34
SFSWAP-207ENST00000538548 KIAA1210Q9ULL0 1709 aa23.43■■□□□ 1.34
SFSWAP-207ENST00000538548 KANK1Q14678 1352 aa23.42■■□□□ 1.34
SFSWAP-207ENST00000538548 ERVK-7P63135 1459 aa23.42■■□□□ 1.34
SFSWAP-207ENST00000538548 NEUROD2Q15784 382 aa23.42■■□□□ 1.34
SFSWAP-207ENST00000538548 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
SFSWAP-207ENST00000538548 TPM2P07951 284 aa23.41■■□□□ 1.34
SFSWAP-207ENST00000538548 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
SFSWAP-207ENST00000538548 RRP7AQ9Y3A4 280 aaKnown RBP23.4■■□□□ 1.34
SFSWAP-207ENST00000538548 CCDC27Q2M243 656 aa23.39■■□□□ 1.34
SFSWAP-207ENST00000538548 CIZ1Q9ULV3 898 aaPredicted RBP23.39■■□□□ 1.34
SFSWAP-207ENST00000538548 SNX21Q969T3 373 aa23.38■■□□□ 1.33
SFSWAP-207ENST00000538548 SKOR2Q2VWA4 1001 aaPredicted RBP23.38■■□□□ 1.33
SFSWAP-207ENST00000538548 HDAC1Q13547 482 aaPredicted RBP23.37■■□□□ 1.33
SFSWAP-207ENST00000538548 ZKSCAN2Q63HK3 967 aa23.37■■□□□ 1.33
SFSWAP-207ENST00000538548 GBP4Q96PP9 640 aa23.37■■□□□ 1.33
SFSWAP-207ENST00000538548 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
SFSWAP-207ENST00000538548 PTMSP20962 102 aa23.37■■□□□ 1.33
SFSWAP-207ENST00000538548 SMC5Q8IY18 1101 aa23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 FTSJ3Q8IY81 847 aaKnown RBP23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 TNPO1Q92973 898 aaKnown RBP23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 FANCAO15360 1455 aa23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 RBM25P49756 843 aaKnown RBP23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 GAS2L3Q86XJ1 694 aa23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 DZIP1LQ8IYY4 767 aaKnown RBP23.36■■□□□ 1.33
SFSWAP-207ENST00000538548 PTPRTO14522 1441 aa23.35■■□□□ 1.33
SFSWAP-207ENST00000538548 CLTCL1P53675 1640 aa23.35■■□□□ 1.33
SFSWAP-207ENST00000538548 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
SFSWAP-207ENST00000538548 RAB3GAP1Q15042 981 aa23.32■■□□□ 1.32
SFSWAP-207ENST00000538548 PDCL3Q9H2J4 239 aa23.32■■□□□ 1.32
SFSWAP-207ENST00000538548 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
SFSWAP-207ENST00000538548 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
SFSWAP-207ENST00000538548 ABCC1P33527 1531 aa23.31■■□□□ 1.32
SFSWAP-207ENST00000538548 CCDC173Q0VFZ6 552 aa23.3■■□□□ 1.32
SFSWAP-207ENST00000538548 DDX19BQ9UMR2 479 aa23.29■■□□□ 1.32
SFSWAP-207ENST00000538548 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
SFSWAP-207ENST00000538548 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
SFSWAP-207ENST00000538548 PPP1R9BQ96SB3 815 aa23.28■■□□□ 1.32
SFSWAP-207ENST00000538548 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
SFSWAP-207ENST00000538548 NSD3Q9BZ95 1437 aa23.27■■□□□ 1.32
SFSWAP-207ENST00000538548 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
SFSWAP-207ENST00000538548 ZNF518AQ6AHZ1 1483 aa23.26■■□□□ 1.31
SFSWAP-207ENST00000538548 KIAA1211Q6ZU35 1233 aa23.26■■□□□ 1.31
SFSWAP-207ENST00000538548 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 MYO3AQ8NEV4 1616 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 MYOM2P54296 1465 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 MAP3K4Q9Y6R4 1608 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 TRIM27P14373 513 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 ZSCAN30Q86W11 494 aa23.25■■□□□ 1.31
SFSWAP-207ENST00000538548 CD109Q6YHK3 1445 aa23.24■■□□□ 1.31
SFSWAP-207ENST00000538548 TNNT2P45379 298 aaPredicted RBP23.24■■□□□ 1.31
SFSWAP-207ENST00000538548 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
SFSWAP-207ENST00000538548 IBTKQ9P2D0 1353 aaPredicted RBP23.24■■□□□ 1.31
SFSWAP-207ENST00000538548 KIF3BO15066 747 aa23.23■■□□□ 1.31
SFSWAP-207ENST00000538548 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
SFSWAP-207ENST00000538548 NASPP49321 788 aaPredicted RBP23.23■■□□□ 1.31
SFSWAP-207ENST00000538548 ITPRIPQ8IWB1 547 aa23.23■■□□□ 1.31
SFSWAP-207ENST00000538548 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
SFSWAP-207ENST00000538548 ANP32BQ92688 251 aaKnown RBP23.22■■□□□ 1.31
SFSWAP-207ENST00000538548 OFD1O75665 1012 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 TET3O43151 1660 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 MTHFSP49914 203 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 TERF1P54274 439 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 ADGRB2O60241 1585 aa23.21■■□□□ 1.31
SFSWAP-207ENST00000538548 NUCB1Q02818 461 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms