RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SLC24A1O60721 1099 aa18.95■□□□□ 0.62
ACTN1-205ENST00000538545 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
ACTN1-205ENST00000538545 CCDC146Q8IYE0 955 aa18.94■□□□□ 0.62
ACTN1-205ENST00000538545 CDK19Q9BWU1 502 aa18.94■□□□□ 0.62
ACTN1-205ENST00000538545 CDCA7LQ96GN5 454 aa18.94■□□□□ 0.62
ACTN1-205ENST00000538545 NCKAP5LQ9HCH0 1330 aa18.94■□□□□ 0.62
ACTN1-205ENST00000538545 NRXN3Q9Y4C0 1643 aa18.93■□□□□ 0.62
ACTN1-205ENST00000538545 TMEM2Q9UHN6 1383 aa18.92■□□□□ 0.62
ACTN1-205ENST00000538545 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
ACTN1-205ENST00000538545 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
ACTN1-205ENST00000538545 C3P01024 1663 aa18.91■□□□□ 0.62
ACTN1-205ENST00000538545 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
ACTN1-205ENST00000538545 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
ACTN1-205ENST00000538545 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
ACTN1-205ENST00000538545 GGNBP2Q9H3C7 697 aa18.9■□□□□ 0.62
ACTN1-205ENST00000538545 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
ACTN1-205ENST00000538545 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
ACTN1-205ENST00000538545 FER1L4A9Z1Z3 1794 aa18.89■□□□□ 0.61
ACTN1-205ENST00000538545 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
ACTN1-205ENST00000538545 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
ACTN1-205ENST00000538545 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.88■□□□□ 0.61
ACTN1-205ENST00000538545 FBLN1P23142 703 aa18.87■□□□□ 0.61
ACTN1-205ENST00000538545 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
ACTN1-205ENST00000538545 ANKRD36BQ8N2N9 1353 aa18.86■□□□□ 0.61
ACTN1-205ENST00000538545 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
ACTN1-205ENST00000538545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.85■□□□□ 0.612e-7■■■■□ 20.7
ACTN1-205ENST00000538545 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
ACTN1-205ENST00000538545 MTHFSP49914 203 aa18.84■□□□□ 0.61
ACTN1-205ENST00000538545 ABCC11Q96J66 1382 aa18.83■□□□□ 0.6
ACTN1-205ENST00000538545 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.6
ACTN1-205ENST00000538545 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
ACTN1-205ENST00000538545 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
ACTN1-205ENST00000538545 CD163L1Q9NR16 1453 aa18.82■□□□□ 0.6
ACTN1-205ENST00000538545 ROBO2Q9HCK4 1378 aa18.82■□□□□ 0.6
ACTN1-205ENST00000538545 APAF1O14727 1248 aa18.8■□□□□ 0.6
ACTN1-205ENST00000538545 FYB1O15117 783 aa18.8■□□□□ 0.6
ACTN1-205ENST00000538545 ATAD2Q6PL18 1390 aa18.8■□□□□ 0.6
ACTN1-205ENST00000538545 WASLO00401 505 aaPredicted RBP18.79■□□□□ 0.6
ACTN1-205ENST00000538545 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
ACTN1-205ENST00000538545 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
ACTN1-205ENST00000538545 NLRP1Q9C000 1473 aa18.78■□□□□ 0.6
ACTN1-205ENST00000538545 NEUROD2Q15784 382 aa18.78■□□□□ 0.6
ACTN1-205ENST00000538545 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
ACTN1-205ENST00000538545 TERF2IPQ9NYB0 399 aa18.78■□□□□ 0.6
ACTN1-205ENST00000538545 RBM33Q96EV2 1170 aaKnown RBP18.78■□□□□ 0.6
ACTN1-205ENST00000538545 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
ACTN1-205ENST00000538545 PTPRUQ92729 1446 aa18.77■□□□□ 0.6
ACTN1-205ENST00000538545 RRP7AQ9Y3A4 280 aaKnown RBP18.77■□□□□ 0.59
ACTN1-205ENST00000538545 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
ACTN1-205ENST00000538545 PRR36Q9H6K5 1346 aa18.75■□□□□ 0.59
ACTN1-205ENST00000538545 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
ACTN1-205ENST00000538545 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
ACTN1-205ENST00000538545 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
ACTN1-205ENST00000538545 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
ACTN1-205ENST00000538545 DLC1Q96QB1 1528 aa18.75■□□□□ 0.59
ACTN1-205ENST00000538545 PLEKHG1Q9ULL1 1385 aa18.74■□□□□ 0.59
ACTN1-205ENST00000538545 THEMISQ8N1K5 641 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-205ENST00000538545 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-205ENST00000538545 PPM1GO15355 546 aaPredicted RBP18.73■□□□□ 0.59
ACTN1-205ENST00000538545 PPIP5K1Q6PFW1 1433 aa18.73■□□□□ 0.59
ACTN1-205ENST00000538545 PLIN1O60240 522 aa18.72■□□□□ 0.59
ACTN1-205ENST00000538545 NME9Q86XW9 330 aa18.72■□□□□ 0.59
ACTN1-205ENST00000538545 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
ACTN1-205ENST00000538545 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
ACTN1-205ENST00000538545 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.7■□□□□ 0.58
ACTN1-205ENST00000538545 SHPRHQ149N8 1683 aa18.7■□□□□ 0.58
ACTN1-205ENST00000538545 USP32Q8NFA0 1604 aa18.69■□□□□ 0.58
ACTN1-205ENST00000538545 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
ACTN1-205ENST00000538545 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
ACTN1-205ENST00000538545 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.58
ACTN1-205ENST00000538545 NINLQ9Y2I6 1382 aa18.69■□□□□ 0.58
ACTN1-205ENST00000538545 TECPR2O15040 1411 aa18.68■□□□□ 0.58
ACTN1-205ENST00000538545 CCDC61Q9Y6R9 512 aa18.68■□□□□ 0.58
ACTN1-205ENST00000538545 KCNA6P17658 529 aa18.68■□□□□ 0.58
ACTN1-205ENST00000538545 PMFBP1Q8TBY8 1022 aa18.68■□□□□ 0.58
ACTN1-205ENST00000538545 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
ACTN1-205ENST00000538545 SLIT1O75093 1534 aa18.67■□□□□ 0.58
ACTN1-205ENST00000538545 MED14O60244 1454 aa18.67■□□□□ 0.58
ACTN1-205ENST00000538545 CPS1P31327 1500 aa18.67■□□□□ 0.58
ACTN1-205ENST00000538545 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
ACTN1-205ENST00000538545 PDE3BQ13370 1112 aa18.66■□□□□ 0.58
ACTN1-205ENST00000538545 ZNF521Q96K83 1311 aa18.66■□□□□ 0.58
ACTN1-205ENST00000538545 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
ACTN1-205ENST00000538545 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
ACTN1-205ENST00000538545 KNDC1Q76NI1 1749 aa18.65■□□□□ 0.58
ACTN1-205ENST00000538545 SOX12O15370 315 aa18.65■□□□□ 0.58
ACTN1-205ENST00000538545 CFAP53Q96M91 514 aa18.65■□□□□ 0.58
ACTN1-205ENST00000538545 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
ACTN1-205ENST00000538545 NSD2O96028 1365 aa18.64■□□□□ 0.58
ACTN1-205ENST00000538545 GOLGA2Q08379 1002 aa18.64■□□□□ 0.58
ACTN1-205ENST00000538545 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.58
ACTN1-205ENST00000538545 TBX22Q9Y458 520 aa18.64■□□□□ 0.58
ACTN1-205ENST00000538545 ATP7BP35670 1465 aa18.64■□□□□ 0.57
ACTN1-205ENST00000538545 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
ACTN1-205ENST00000538545 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
ACTN1-205ENST00000538545 INSRP06213 1382 aa18.63■□□□□ 0.57
ACTN1-205ENST00000538545 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
ACTN1-205ENST00000538545 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
ACTN1-205ENST00000538545 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
ACTN1-205ENST00000538545 ACEP12821 1306 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms