RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PTPRMP28827 1452 aa15.08■□□□□ 0
SLC28A1-204ENST00000538177 SPATA31D1Q6ZQQ2 1576 aa15.07■□□□□ 0
SLC28A1-204ENST00000538177 YTHDC2Q9H6S0 1430 aaKnown RBP15.07■□□□□ 0
SLC28A1-204ENST00000538177 NINLQ9Y2I6 1382 aa15.07■□□□□ 0
SLC28A1-204ENST00000538177 STK26Q9P289 416 aa15.07■□□□□ 0
SLC28A1-204ENST00000538177 NSD2O96028 1365 aa15.06■□□□□ 0
SLC28A1-204ENST00000538177 SLFN5Q08AF3 891 aa15.06■□□□□ 0
SLC28A1-204ENST00000538177 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
SLC28A1-204ENST00000538177 CABP2Q9NPB3 220 aa15.06■□□□□ 0
SLC28A1-204ENST00000538177 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
SLC28A1-204ENST00000538177 ALKQ9UM73 1620 aa15.05■□□□□ 0
SLC28A1-204ENST00000538177 APAF1O14727 1248 aa15.05■□□□□ 0
SLC28A1-204ENST00000538177 CCDC146Q8IYE0 955 aa15.05■□□□□ 0
SLC28A1-204ENST00000538177 STAG3Q9UJ98 1225 aa15.05■□□□□ 0
SLC28A1-204ENST00000538177 ARHGEF40Q8TER5 1519 aa15.05■□□□□ -0
SLC28A1-204ENST00000538177 A2ML1A8K2U0 1454 aa15.04■□□□□ -0
SLC28A1-204ENST00000538177 SAFB2Q14151 953 aaKnown RBP eCLIP15.04■□□□□ -0
SLC28A1-204ENST00000538177 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
SLC28A1-204ENST00000538177 PRAM1Q96QH2 718 aa15.03■□□□□ -0
SLC28A1-204ENST00000538177 KIF13AQ9H1H9 1805 aa15.03■□□□□ -0
SLC28A1-204ENST00000538177 ATAD2Q6PL18 1390 aa15.02■□□□□ -0
SLC28A1-204ENST00000538177 POGKQ9P215 609 aa15.02□□□□□ -0.01
SLC28A1-204ENST00000538177 PLIN1O60240 522 aa15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 MTHFSP49914 203 aa15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 MLECQ14165 292 aa15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 RIMS2Q9UQ26 1411 aa15.01□□□□□ -0.01
SLC28A1-204ENST00000538177 ABCC11Q96J66 1382 aa15□□□□□ -0.01
SLC28A1-204ENST00000538177 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
SLC28A1-204ENST00000538177 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
SLC28A1-204ENST00000538177 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
SLC28A1-204ENST00000538177 A0A1W2PP64 1363 aa15□□□□□ -0.01
SLC28A1-204ENST00000538177 E9PSI1 815 aa15□□□□□ -0.01
SLC28A1-204ENST00000538177 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
SLC28A1-204ENST00000538177 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
SLC28A1-204ENST00000538177 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
SLC28A1-204ENST00000538177 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
SLC28A1-204ENST00000538177 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
SLC28A1-204ENST00000538177 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
SLC28A1-204ENST00000538177 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
SLC28A1-204ENST00000538177 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
SLC28A1-204ENST00000538177 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
SLC28A1-204ENST00000538177 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
SLC28A1-204ENST00000538177 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.01
SLC28A1-204ENST00000538177 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
SLC28A1-204ENST00000538177 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 MED14O60244 1454 aa14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 C20orf194Q5TEA3 1177 aa14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
SLC28A1-204ENST00000538177 IQSEC2Q5JU85 1478 aa14.94□□□□□ -0.02
SLC28A1-204ENST00000538177 FYB1O15117 783 aa14.94□□□□□ -0.02
SLC28A1-204ENST00000538177 NLRP1Q9C000 1473 aa14.93□□□□□ -0.02
SLC28A1-204ENST00000538177 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
SLC28A1-204ENST00000538177 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
SLC28A1-204ENST00000538177 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
SLC28A1-204ENST00000538177 GGNBP2Q9H3C7 697 aa14.92□□□□□ -0.02
SLC28A1-204ENST00000538177 MSH5O43196 834 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 MYT1Q01538 1121 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 WDR63Q8IWG1 891 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 NRXN3Q9Y4C0 1643 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 TNRQ92752 1358 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 TCERG1O14776 1098 aaKnown RBP14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
SLC28A1-204ENST00000538177 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
SLC28A1-204ENST00000538177 ANKRD26Q9UPS8 1709 aa14.9□□□□□ -0.02
SLC28A1-204ENST00000538177 METP08581 1390 aa14.89□□□□□ -0.03
SLC28A1-204ENST00000538177 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
SLC28A1-204ENST00000538177 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
SLC28A1-204ENST00000538177 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
SLC28A1-204ENST00000538177 ATP7BP35670 1465 aa14.88□□□□□ -0.03
SLC28A1-204ENST00000538177 RRP7AQ9Y3A4 280 aaKnown RBP14.88□□□□□ -0.03
SLC28A1-204ENST00000538177 BCAR3O75815 825 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 TECPR2O15040 1411 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 FAM135BQ49AJ0 1406 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 PNPLA6Q8IY17 1366 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 MS4A1P11836 297 aa14.87□□□□□ -0.03
SLC28A1-204ENST00000538177 KDM2BQ8NHM5 1336 aa14.86□□□□□ -0.03
SLC28A1-204ENST00000538177 ADGRB2O60241 1585 aa14.86□□□□□ -0.03
SLC28A1-204ENST00000538177 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
SLC28A1-204ENST00000538177 WASLO00401 505 aaPredicted RBP14.86□□□□□ -0.03
SLC28A1-204ENST00000538177 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
SLC28A1-204ENST00000538177 PDE3AQ14432 1141 aa14.84□□□□□ -0.03
SLC28A1-204ENST00000538177 KNDC1Q76NI1 1749 aa14.84□□□□□ -0.03
SLC28A1-204ENST00000538177 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
SLC28A1-204ENST00000538177 CENPQQ7L2Z9 268 aaPredicted RBP14.84□□□□□ -0.03
SLC28A1-204ENST00000538177 TXNDC2Q86VQ3 553 aa14.84□□□□□ -0.03
SLC28A1-204ENST00000538177 KIF20BQ96Q89 1820 aa14.83□□□□□ -0.03
SLC28A1-204ENST00000538177 UBR1Q8IWV7 1749 aa14.83□□□□□ -0.04
SLC28A1-204ENST00000538177 CPS1P31327 1500 aa14.82□□□□□ -0.04
SLC28A1-204ENST00000538177 U2SURPO15042 1029 aaKnown RBP14.82□□□□□ -0.04
SLC28A1-204ENST00000538177 DIAPH1O60610 1272 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms