RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 MLLT3P42568 568 aaPredicted RBP9.15□□□□□ -0.94
DDB1-210ENST00000538129 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDB1-210ENST00000538129 C6orf132Q5T0Z8 1188 aa9.15□□□□□ -0.94
DDB1-210ENST00000538129 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
DDB1-210ENST00000538129 ADAM33Q9BZ11 813 aa9.15□□□□□ -0.94
DDB1-210ENST00000538129 MAGI2Q86UL8 1455 aa9.15□□□□□ -0.95
DDB1-210ENST00000538129 MIA2Q96PC5 1412 aa9.14□□□□□ -0.95
DDB1-210ENST00000538129 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
DDB1-210ENST00000538129 ZNF644Q9H582 1327 aaPredicted RBP9.14□□□□□ -0.95
DDB1-210ENST00000538129 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
DDB1-210ENST00000538129 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
DDB1-210ENST00000538129 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
DDB1-210ENST00000538129 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
DDB1-210ENST00000538129 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
DDB1-210ENST00000538129 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
DDB1-210ENST00000538129 FRMPD1Q5SYB0 1578 aa9.12□□□□□ -0.95
DDB1-210ENST00000538129 SAMD9LQ8IVG5 1584 aa9.12□□□□□ -0.95
DDB1-210ENST00000538129 ABCC1P33527 1531 aa9.12□□□□□ -0.95
DDB1-210ENST00000538129 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
DDB1-210ENST00000538129 TRAPPC8Q9Y2L5 1435 aa9.12□□□□□ -0.95
DDB1-210ENST00000538129 ZMYM4Q5VZL5 1548 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 TK2O00142 265 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-210ENST00000538129 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 MYT1LQ9UL68 1186 aa9.11□□□□□ -0.95
DDB1-210ENST00000538129 SPAG9O60271 1321 aaKnown RBP9.1□□□□□ -0.95
DDB1-210ENST00000538129 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
DDB1-210ENST00000538129 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
DDB1-210ENST00000538129 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
DDB1-210ENST00000538129 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
DDB1-210ENST00000538129 KDM5CP41229 1560 aa9.1□□□□□ -0.95
DDB1-210ENST00000538129 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
DDB1-210ENST00000538129 SLC4A5Q9BY07 1137 aa9.09□□□□□ -0.95
DDB1-210ENST00000538129 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
DDB1-210ENST00000538129 SYCP2Q9BX26 1530 aa9.09□□□□□ -0.95
DDB1-210ENST00000538129 ATP10AO60312 1499 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 CAMSAP2Q08AD1 1489 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 FGD6Q6ZV73 1430 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
DDB1-210ENST00000538129 FCHSD2O94868 740 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 PSEN2P49810 448 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 ZFYVE16Q7Z3T8 1539 aa9.08□□□□□ -0.96
DDB1-210ENST00000538129 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
DDB1-210ENST00000538129 YEATS2Q9ULM3 1422 aa9.07□□□□□ -0.96
DDB1-210ENST00000538129 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
DDB1-210ENST00000538129 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
DDB1-210ENST00000538129 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
DDB1-210ENST00000538129 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
DDB1-210ENST00000538129 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
DDB1-210ENST00000538129 NBPF3Q9H094 633 aa9.06□□□□□ -0.96
DDB1-210ENST00000538129 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
DDB1-210ENST00000538129 TCOF1Q13428 1488 aaKnown RBP9.06□□□□□ -0.96
DDB1-210ENST00000538129 CCDC141Q6ZP82 1450 aa9.06□□□□□ -0.96
DDB1-210ENST00000538129 HECW2Q9P2P5 1572 aa9.06□□□□□ -0.96
DDB1-210ENST00000538129 KIDINS220Q9ULH0 1771 aa9.06□□□□□ -0.96
DDB1-210ENST00000538129 ARHGEF40Q8TER5 1519 aa9.05□□□□□ -0.96
DDB1-210ENST00000538129 PTPN23Q9H3S7 1636 aa9.05□□□□□ -0.96
DDB1-210ENST00000538129 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
DDB1-210ENST00000538129 RBM26Q5T8P6 1007 aaKnown RBP9.05□□□□□ -0.96
DDB1-210ENST00000538129 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
DDB1-210ENST00000538129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDB1-210ENST00000538129 PRSS12P56730 875 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 HIC1Q14526 733 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 LMOD2Q6P5Q4 547 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 ADGRD1Q6QNK2 874 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDB1-210ENST00000538129 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 ATP7AQ04656 1500 aa9.04□□□□□ -0.96
DDB1-210ENST00000538129 POTEEQ6S8J3 1075 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 KRTAP3-3Q9BYR6 98 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 RABGEF1Q9UJ41 708 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 ABCC5O15440 1437 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 REREQ9P2R6 1566 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 INO80Q9ULG1 1556 aaPredicted RBP9.03□□□□□ -0.96
DDB1-210ENST00000538129 DIP2CQ9Y2E4 1556 aa9.03□□□□□ -0.96
DDB1-210ENST00000538129 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 TRIM6-TRIM34B2RNG4 842 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 COL9A1P20849 921 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 PTGDRQ13258 359 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 VPS9D1Q9Y2B5 631 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 MAST1Q9Y2H9 1570 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 ABCA6Q8N139 1617 aa9.02□□□□□ -0.97
DDB1-210ENST00000538129 DHX29Q7Z478 1369 aaKnown RBP9.01□□□□□ -0.97
DDB1-210ENST00000538129 AGLP35573 1532 aa9.01□□□□□ -0.97
DDB1-210ENST00000538129 DAPK1P53355 1430 aa9.01□□□□□ -0.97
DDB1-210ENST00000538129 A2MP01023 1474 aa9.01□□□□□ -0.97
DDB1-210ENST00000538129 ADGBQ8N7X0 1667 aa9□□□□□ -0.97
DDB1-210ENST00000538129 RRBP1Q9P2E9 1410 aaKnown RBP9□□□□□ -0.97
DDB1-210ENST00000538129 NBPF26B4DH59 902 aa9□□□□□ -0.97
DDB1-210ENST00000538129 HDGFP51858 240 aaKnown RBP9□□□□□ -0.97
DDB1-210ENST00000538129 MLECQ14165 292 aa9□□□□□ -0.97
DDB1-210ENST00000538129 MRPL50Q8N5N7 158 aaKnown RBP9□□□□□ -0.97
DDB1-210ENST00000538129 DNMT1P26358 1616 aaKnown RBP9□□□□□ -0.97
DDB1-210ENST00000538129 SHANK2Q9UPX8 1470 aa9□□□□□ -0.97
DDB1-210ENST00000538129 BCORL1Q5H9F3 1711 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms