RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DNAJC2Q99543 621 aaKnown RBP13.65□□□□□ -0.22
LINC00346-201ENST00000538077 ZKSCAN1P17029 563 aaPredicted RBP13.65□□□□□ -0.22
LINC00346-201ENST00000538077 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
LINC00346-201ENST00000538077 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
LINC00346-201ENST00000538077 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 TXNDC2Q86VQ3 553 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
LINC00346-201ENST00000538077 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 KIF6Q6ZMV9 814 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
LINC00346-201ENST00000538077 PDE4AP27815 886 aa13.63□□□□□ -0.23
LINC00346-201ENST00000538077 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
LINC00346-201ENST00000538077 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
LINC00346-201ENST00000538077 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
LINC00346-201ENST00000538077 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
LINC00346-201ENST00000538077 DDX11L8A8MPP1 907 aa13.63□□□□□ -0.23
LINC00346-201ENST00000538077 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
LINC00346-201ENST00000538077 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
LINC00346-201ENST00000538077 TPM1P09493 284 aa13.62□□□□□ -0.23
LINC00346-201ENST00000538077 API5Q9BZZ5 524 aaKnown RBP13.61□□□□□ -0.23
LINC00346-201ENST00000538077 C1orf115Q9H7X2 142 aa13.61□□□□□ -0.23
LINC00346-201ENST00000538077 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
LINC00346-201ENST00000538077 GPRASP1Q5JY77 1395 aa13.61□□□□□ -0.23
LINC00346-201ENST00000538077 UBTFL1P0CB47 393 aaPredicted RBP13.61□□□□□ -0.23
LINC00346-201ENST00000538077 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
LINC00346-201ENST00000538077 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
LINC00346-201ENST00000538077 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
LINC00346-201ENST00000538077 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
LINC00346-201ENST00000538077 NAP1L1P55209 391 aaKnown RBP13.6□□□□□ -0.23
LINC00346-201ENST00000538077 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
LINC00346-201ENST00000538077 GNAI1P63096 354 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 MIA2Q96PC5 1412 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 ROCK1Q13464 1354 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
LINC00346-201ENST00000538077 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 REC8O95072 547 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 MYL6BP14649 208 aa13.59□□□□□ -0.23
LINC00346-201ENST00000538077 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
LINC00346-201ENST00000538077 TNNT3P45378 269 aaPredicted RBP13.58□□□□□ -0.24
LINC00346-201ENST00000538077 CHMP4CQ96CF2 233 aa13.58□□□□□ -0.24
LINC00346-201ENST00000538077 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
LINC00346-201ENST00000538077 SMC3Q9UQE7 1217 aa13.58□□□□□ -0.24
LINC00346-201ENST00000538077 RALYLQ86SE5 291 aaKnown RBP13.58□□□□□ -0.24
LINC00346-201ENST00000538077 FSD1Q9BTV5 496 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 ERC2O15083 957 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
LINC00346-201ENST00000538077 TTC39AQ5SRH9 613 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.242e-6■■■■■ 96.1
LINC00346-201ENST00000538077 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00346-201ENST00000538077 CFAP70Q5T0N1 1121 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 SIL1Q9H173 461 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
LINC00346-201ENST00000538077 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
LINC00346-201ENST00000538077 MYOM3Q5VTT5 1437 aa13.56□□□□□ -0.24
LINC00346-201ENST00000538077 CABP4P57796 275 aa13.56□□□□□ -0.24
LINC00346-201ENST00000538077 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
LINC00346-201ENST00000538077 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
LINC00346-201ENST00000538077 MTHFSP49914 203 aa13.56□□□□□ -0.24
LINC00346-201ENST00000538077 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
LINC00346-201ENST00000538077 CUX1P39880 1505 aa13.55□□□□□ -0.24
LINC00346-201ENST00000538077 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00346-201ENST00000538077 EPS15P42566 896 aa13.54□□□□□ -0.24
LINC00346-201ENST00000538077 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
LINC00346-201ENST00000538077 ZFYVE27Q5T4F4 411 aa13.54□□□□□ -0.24
LINC00346-201ENST00000538077 ANKRD20A12PQ8NF67 263 aa13.54□□□□□ -0.24
LINC00346-201ENST00000538077 PLEKHO1Q53GL0 409 aaPredicted RBP13.53□□□□□ -0.24
LINC00346-201ENST00000538077 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 CT47A1Q5JQC4 288 aaPredicted RBP13.53□□□□□ -0.24
LINC00346-201ENST00000538077 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
LINC00346-201ENST00000538077 KIF7Q2M1P5 1343 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
LINC00346-201ENST00000538077 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
LINC00346-201ENST00000538077 CCDC30Q5VVM6 783 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 HOMER1Q86YM7 354 aa13.53□□□□□ -0.24
LINC00346-201ENST00000538077 TOP2BQ02880 1626 aa13.52□□□□□ -0.24
LINC00346-201ENST00000538077 NINLQ9Y2I6 1382 aa13.52□□□□□ -0.24
LINC00346-201ENST00000538077 PRG4Q92954 1404 aaPredicted RBP13.52□□□□□ -0.25
LINC00346-201ENST00000538077 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
LINC00346-201ENST00000538077 CCDC70Q6NSX1 233 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 CNTROBQ8N137 903 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 PDILTQ8N807 584 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.25
LINC00346-201ENST00000538077 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
LINC00346-201ENST00000538077 TSR2Q969E8 191 aaKnown RBP13.51□□□□□ -0.25
LINC00346-201ENST00000538077 CEBPZQ03701 1054 aaKnown RBP13.51□□□□□ -0.25
LINC00346-201ENST00000538077 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
LINC00346-201ENST00000538077 FGD6Q6ZV73 1430 aa13.51□□□□□ -0.25
LINC00346-201ENST00000538077 ODF2Q5BJF6 829 aa13.51□□□□□ -0.25
LINC00346-201ENST00000538077 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms