RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GOLGA6L10A6NI86 522 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 DDX11Q96FC9 970 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 PANK1Q8TE04 598 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 VGLL3A8MV65 326 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 KINO60870 393 aaKnown RBP6.79□□□□□ -1.32
CSMD1-215ENST00000537824 SDF4Q9BRK5 362 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 FHAD1B1AJZ9 1412 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 DNAJC2Q99543 621 aaKnown RBP6.79□□□□□ -1.32
CSMD1-215ENST00000537824 ABCC8Q09428 1581 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 RNF187Q5TA31 235 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-215ENST00000537824 RNF20Q5VTR2 975 aa6.79□□□□□ -1.32
CSMD1-215ENST00000537824 PRKRIP1Q9H875 184 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-215ENST00000537824 GOLGA6L7A0A1B0GV03 622 aa6.78□□□□□ -1.32
CSMD1-215ENST00000537824 SAFB2Q14151 953 aaKnown RBP eCLIP6.78□□□□□ -1.32
CSMD1-215ENST00000537824 ERLIN1O75477 346 aa6.78□□□□□ -1.32
CSMD1-215ENST00000537824 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
CSMD1-215ENST00000537824 RP1L1Q8IWN7 2480 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-215ENST00000537824 NBPF1Q3BBV0 1214 aa6.78□□□□□ -1.32
CSMD1-215ENST00000537824 FMNL2Q96PY5 1086 aa6.78□□□□□ -1.32
CSMD1-215ENST00000537824 MNAT1P51948 309 aa6.78□□□□□ -1.32
CSMD1-215ENST00000537824 FAM177A1Q8N128 213 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-215ENST00000537824 VPS53Q5VIR6 699 aa6.77□□□□□ -1.32
CSMD1-215ENST00000537824 KIF27Q86VH2 1401 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 AKAP17AQ02040 695 aaKnown RBP6.77□□□□□ -1.33
CSMD1-215ENST00000537824 CCDC102AQ96A19 550 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 PKD2Q13563 968 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 LRRCC1Q9C099 1032 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 MARCH6O60337 910 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 RUFY2Q8WXA3 655 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 CCDC192P0DO97 292 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 WRNQ14191 1432 aaPredicted RBP eCLIP6.77□□□□□ -1.33
CSMD1-215ENST00000537824 ODF2Q5BJF6 829 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 MYO6Q9UM54 1294 aa6.77□□□□□ -1.33
CSMD1-215ENST00000537824 RABEP1Q15276 862 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 TNMDQ9H2S6 317 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 CDC45O75419 566 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 KANK4Q5T7N3 995 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 ATRXP46100 2492 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 FAM107BQ9H098 131 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 PRDM2Q13029 1718 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 SYCE3A1L190 88 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 NOL10Q9BSC4 688 aaKnown RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 EIF3AQ14152 1382 aaKnown RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 UBXN4Q92575 508 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
CSMD1-215ENST00000537824 INTS3Q68E01 1043 aaKnown RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 RBM33Q96EV2 1170 aaKnown RBP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
CSMD1-215ENST00000537824 ERLIN2O94905 339 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 GTPBP4Q9BZE4 634 aaKnown RBP6.75□□□□□ -1.33
CSMD1-215ENST00000537824 USP47Q96K76 1375 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 LMOD2Q6P5Q4 547 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 TMCO3Q6UWJ1 677 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 CPLX1O14810 134 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 TRIM29Q14134 588 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 CLASRPQ8N2M8 674 aaKnown RBP6.75□□□□□ -1.33
CSMD1-215ENST00000537824 DZIP1LQ8IYY4 767 aaKnown RBP6.75□□□□□ -1.33
CSMD1-215ENST00000537824 CNTLNQ9NXG0 1405 aa6.75□□□□□ -1.33
CSMD1-215ENST00000537824 CIZ1Q9ULV3 898 aaPredicted RBP6.75□□□□□ -1.33
CSMD1-215ENST00000537824 ENOX2Q16206 610 aaKnown RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 ICE1Q9Y2F5 2266 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 KIF2AO00139 706 aaPredicted RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 TTC31Q49AM3 519 aaPredicted RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 KRT222Q8N1A0 295 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 SPAG9O60271 1321 aaKnown RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 CCDC94Q9BW85 323 aaPredicted RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 DDX19BQ9UMR2 479 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 SOGA1O94964 1423 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 HSP90AB2PQ58FF8 381 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 TXLNBQ8N3L3 684 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 NEXNQ0ZGT2 675 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 TAX1BP1Q86VP1 789 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 KIF18AQ8NI77 898 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 LRRFIP2Q9Y608 721 aaKnown RBP6.74□□□□□ -1.33
CSMD1-215ENST00000537824 SHTN1A0MZ66 631 aa6.74□□□□□ -1.33
CSMD1-215ENST00000537824 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 SYNE3Q6ZMZ3 975 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 KIF7Q2M1P5 1343 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-215ENST00000537824 GBP2P32456 591 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-215ENST00000537824 SMARCE1Q969G3 411 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 ZNF318Q5VUA4 2279 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 PTPN14Q15678 1187 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 PLEKHD1A6NEE1 506 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 PDCP20941 246 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 LMAN1P49257 510 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 BRPF1P55201 1214 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-215ENST00000537824 PANK3Q9H999 370 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 FMN1Q68DA7 1419 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 TDO2P48775 406 aa6.73□□□□□ -1.33
CSMD1-215ENST00000537824 SLC26A8Q96RN1 970 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms