RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
SNX17-210ENST00000537606 PTPRMP28827 1452 aa23.27■■□□□ 1.32
SNX17-210ENST00000537606 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
SNX17-210ENST00000537606 PPP4R2Q9NY27 417 aa23.26■■□□□ 1.31
SNX17-210ENST00000537606 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
SNX17-210ENST00000537606 WAPLQ7Z5K2 1190 aa23.25■■□□□ 1.31
SNX17-210ENST00000537606 B4GALNT3Q6L9W6 998 aa23.24■■□□□ 1.31
SNX17-210ENST00000537606 ERICH6BQ5W0A0 696 aa23.23■■□□□ 1.31
SNX17-210ENST00000537606 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
SNX17-210ENST00000537606 TNRQ92752 1358 aa23.23■■□□□ 1.31
SNX17-210ENST00000537606 PUS7Q96PZ0 661 aaKnown RBP23.22■■□□□ 1.31
SNX17-210ENST00000537606 CGNL1Q0VF96 1302 aa23.2■■□□□ 1.3
SNX17-210ENST00000537606 INSRP06213 1382 aa23.2■■□□□ 1.3
SNX17-210ENST00000537606 ANKRD36BQ8N2N9 1353 aa23.19■■□□□ 1.3
SNX17-210ENST00000537606 CDK19Q9BWU1 502 aa23.19■■□□□ 1.3
SNX17-210ENST00000537606 PLEKHH1Q9ULM0 1364 aa23.19■■□□□ 1.3
SNX17-210ENST00000537606 PDE3BQ13370 1112 aa23.19■■□□□ 1.3
SNX17-210ENST00000537606 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
SNX17-210ENST00000537606 METP08581 1390 aa23.17■■□□□ 1.3
SNX17-210ENST00000537606 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
SNX17-210ENST00000537606 A0A1W2PP64 1363 aa23.16■■□□□ 1.3
SNX17-210ENST00000537606 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
SNX17-210ENST00000537606 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.3
SNX17-210ENST00000537606 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
SNX17-210ENST00000537606 RBM19Q9Y4C8 960 aaKnown RBP23.13■■□□□ 1.29
SNX17-210ENST00000537606 MTHFSP49914 203 aa23.13■■□□□ 1.29
SNX17-210ENST00000537606 APAF1O14727 1248 aa23.12■■□□□ 1.29
SNX17-210ENST00000537606 GGNBP2Q9H3C7 697 aa23.12■■□□□ 1.29
SNX17-210ENST00000537606 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
SNX17-210ENST00000537606 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
SNX17-210ENST00000537606 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
SNX17-210ENST00000537606 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
SNX17-210ENST00000537606 TMEM2Q9UHN6 1383 aa23.11■■□□□ 1.29
SNX17-210ENST00000537606 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
SNX17-210ENST00000537606 ABCC11Q96J66 1382 aa23.1■■□□□ 1.29
SNX17-210ENST00000537606 TERF2IPQ9NYB0 399 aa23.1■■□□□ 1.29
SNX17-210ENST00000537606 LTKP29376 864 aa23.09■■□□□ 1.29
SNX17-210ENST00000537606 RRP1P56182 461 aaKnown RBP23.07■■□□□ 1.28
SNX17-210ENST00000537606 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
SNX17-210ENST00000537606 UBR1Q8IWV7 1749 aa23.07■■□□□ 1.28
SNX17-210ENST00000537606 CD163L1Q9NR16 1453 aa23.07■■□□□ 1.28
SNX17-210ENST00000537606 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
SNX17-210ENST00000537606 FYB1O15117 783 aa23.06■■□□□ 1.28
SNX17-210ENST00000537606 DLC1Q96QB1 1528 aa23.05■■□□□ 1.28
SNX17-210ENST00000537606 HDGFL2Q7Z4V5 671 aaPredicted RBP23.05■■□□□ 1.28
SNX17-210ENST00000537606 ZNF521Q96K83 1311 aa23.05■■□□□ 1.28
SNX17-210ENST00000537606 GOLGA2Q08379 1002 aa23.03■■□□□ 1.28
SNX17-210ENST00000537606 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
SNX17-210ENST00000537606 NSD2O96028 1365 aa23.03■■□□□ 1.28
SNX17-210ENST00000537606 NCKAP5LQ9HCH0 1330 aa23.03■■□□□ 1.28
SNX17-210ENST00000537606 PLIN1O60240 522 aa23.02■■□□□ 1.28
SNX17-210ENST00000537606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.02■■□□□ 1.28
SNX17-210ENST00000537606 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
SNX17-210ENST00000537606 DUSP27Q5VZP5 1158 aa23.02■■□□□ 1.28
SNX17-210ENST00000537606 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
SNX17-210ENST00000537606 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
SNX17-210ENST00000537606 NEUROD2Q15784 382 aa23.01■■□□□ 1.27
SNX17-210ENST00000537606 CCDC136Q96JN2 1154 aa23■■□□□ 1.27
SNX17-210ENST00000537606 C3P01024 1663 aa22.99■■□□□ 1.27
SNX17-210ENST00000537606 RRP7AQ9Y3A4 280 aaKnown RBP22.99■■□□□ 1.27
SNX17-210ENST00000537606 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
SNX17-210ENST00000537606 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
SNX17-210ENST00000537606 SHPRHQ149N8 1683 aa22.98■■□□□ 1.27
SNX17-210ENST00000537606 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
SNX17-210ENST00000537606 FBLN1P23142 703 aa22.98■■□□□ 1.27
SNX17-210ENST00000537606 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
SNX17-210ENST00000537606 SLFN5Q08AF3 891 aa22.97■■□□□ 1.27
SNX17-210ENST00000537606 ROBO2Q9HCK4 1378 aa22.97■■□□□ 1.27
SNX17-210ENST00000537606 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
SNX17-210ENST00000537606 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
SNX17-210ENST00000537606 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
SNX17-210ENST00000537606 NUDT16Q96DE0 195 aaKnown RBP22.96■■□□□ 1.27
SNX17-210ENST00000537606 FER1L4A9Z1Z3 1794 aa22.95■■□□□ 1.27
SNX17-210ENST00000537606 NUTM2FA1L443 756 aa22.94■■□□□ 1.26
SNX17-210ENST00000537606 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
SNX17-210ENST00000537606 PLEKHG1Q9ULL1 1385 aa22.94■■□□□ 1.26
SNX17-210ENST00000537606 PPIP5K1Q6PFW1 1433 aa22.94■■□□□ 1.26
SNX17-210ENST00000537606 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
SNX17-210ENST00000537606 FAM135BQ49AJ0 1406 aa22.92■■□□□ 1.26
SNX17-210ENST00000537606 U2SURPO15042 1029 aaKnown RBP22.92■■□□□ 1.26
SNX17-210ENST00000537606 SIRT1Q96EB6 747 aa22.92■■□□□ 1.26
SNX17-210ENST00000537606 TECPR2O15040 1411 aa22.92■■□□□ 1.26
SNX17-210ENST00000537606 WWC1Q8IX03 1113 aa22.92■■□□□ 1.26
SNX17-210ENST00000537606 CCDC61Q9Y6R9 512 aa22.9■■□□□ 1.26
SNX17-210ENST00000537606 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
SNX17-210ENST00000537606 TRMT2AQ8IZ69 625 aaKnown RBP22.9■■□□□ 1.26
SNX17-210ENST00000537606 ZRANB1Q9UGI0 708 aa22.9■■□□□ 1.26
SNX17-210ENST00000537606 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.26
SNX17-210ENST00000537606 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.25
SNX17-210ENST00000537606 ATP7BP35670 1465 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 NME9Q86XW9 330 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 CPS1P31327 1500 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 KNDC1Q76NI1 1749 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 PTPRUQ92729 1446 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 C20orf194Q5TEA3 1177 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
SNX17-210ENST00000537606 E9PSI1 815 aa22.87■■□□□ 1.25
SNX17-210ENST00000537606 MED14O60244 1454 aa22.86■■□□□ 1.25
SNX17-210ENST00000537606 CPSF1Q10570 1443 aaKnown RBP22.86■■□□□ 1.25
SNX17-210ENST00000537606 CRBNQ96SW2 442 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms