RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
SRGAP1-202ENST00000537556 CREBRFQ8IUR6 639 aa10.49□□□□□ -0.73
SRGAP1-202ENST00000537556 CASKIN1Q8WXD9 1431 aa10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 BAG4O95429 457 aaKnown RBP10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 TNNT3P45378 269 aaPredicted RBP10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 PRIM1P49642 420 aaKnown RBP10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
SRGAP1-202ENST00000537556 CAPN2P17655 700 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 PSEN1P49768 467 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 SLFN5Q08AF3 891 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 TERF2Q15554 542 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 FKBP5Q13451 457 aaPredicted RBP10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 LRSAM1Q6UWE0 723 aa10.47□□□□□ -0.73
SRGAP1-202ENST00000537556 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
SRGAP1-202ENST00000537556 ZNF521Q96K83 1311 aa10.46□□□□□ -0.74
SRGAP1-202ENST00000537556 IFT140Q96RY7 1462 aa10.46□□□□□ -0.74
SRGAP1-202ENST00000537556 NKTRP30414 1462 aaKnown RBP10.45□□□□□ -0.74
SRGAP1-202ENST00000537556 KIF14Q15058 1648 aa10.45□□□□□ -0.74
SRGAP1-202ENST00000537556 SSFA2P28290 1259 aa10.45□□□□□ -0.74
SRGAP1-202ENST00000537556 SYCP1Q15431 976 aa10.45□□□□□ -0.74
SRGAP1-202ENST00000537556 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 SOX12O15370 315 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 CTIFO43310 598 aaKnown RBP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 SPTLC3Q9NUV7 552 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 E9PCH4 1651 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 BCAR3O75815 825 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 NUCB2P80303 420 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 TRMT2AQ8IZ69 625 aaKnown RBP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 PLEKHH1Q9ULM0 1364 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 CC2D1BQ5T0F9 858 aaKnown RBP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 MCTP1Q6DN14 999 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 CARD11Q9BXL7 1154 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 ADAMTS8Q9UP79 889 aa10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 MORC2Q9Y6X9 1032 aaPredicted RBP10.44□□□□□ -0.74
SRGAP1-202ENST00000537556 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 NPC1L1Q9UHC9 1359 aa10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 K7ELQ4 463 aaPredicted RBP10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 CNPY4Q8N129 248 aa10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 COG6Q9Y2V7 657 aa10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 FEZ2Q9UHY8 353 aaPredicted RBP10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 CTNNA3Q9UI47 895 aa10.43□□□□□ -0.74
SRGAP1-202ENST00000537556 ZBTB7CA1YPR0 619 aa10.42□□□□□ -0.74
SRGAP1-202ENST00000537556 KRT222Q8N1A0 295 aa10.42□□□□□ -0.74
SRGAP1-202ENST00000537556 SLC52A1Q9NWF4 448 aa10.42□□□□□ -0.74
SRGAP1-202ENST00000537556 LMBRD1Q9NUN5 540 aa10.42□□□□□ -0.74
SRGAP1-202ENST00000537556 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 ST20-MTHFSA0A0A6YYL1 179 aa10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 PER1O15534 1290 aaPredicted RBP10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 HSP90B1P14625 803 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 WWC1Q8IX03 1113 aa10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 NGEFQ8N5V2 710 aa10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 EPRSP07814 1512 aaKnown RBP10.41□□□□□ -0.74
SRGAP1-202ENST00000537556 RALGAPBQ86X10 1494 aa10.4□□□□□ -0.74
SRGAP1-202ENST00000537556 MYCNP04198 464 aaPredicted RBP10.4□□□□□ -0.74
SRGAP1-202ENST00000537556 HOMEZQ8IX15 550 aa10.4□□□□□ -0.74
SRGAP1-202ENST00000537556 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
SRGAP1-202ENST00000537556 KCNG1Q9UIX4 513 aa10.4□□□□□ -0.75
SRGAP1-202ENST00000537556 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 GTF2A1P52655 376 aaPredicted RBP10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 SYCE3A1L190 88 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 UVSSAQ2YD98 709 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 MYCBPQ99417 103 aaPredicted RBP10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 KDM6BO15054 1643 aa10.39□□□□□ -0.75
SRGAP1-202ENST00000537556 MBD3O95983 291 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 EFCAB5A4FU69 1503 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 UHRF1BP1Q6BDS2 1440 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 TSPY26PQ9H489 355 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 TPM3P06753 285 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 NCBP1Q09161 790 aaKnown RBP10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 RNF214Q8ND24 703 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 RASSF4Q9H2L5 321 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 RSPH14Q9UHP6 348 aa10.38□□□□□ -0.75
SRGAP1-202ENST00000537556 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 TCOF1Q13428 1488 aaKnown RBP10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 IGF1RP08069 1367 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
SRGAP1-202ENST00000537556 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms