RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
LPCAT3-206ENST00000537179 PSDA5PKW4 1024 aaPredicted RBP23.73■■□□□ 1.39
LPCAT3-206ENST00000537179 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
LPCAT3-206ENST00000537179 SLIT2O94813 1529 aa23.73■■□□□ 1.39
LPCAT3-206ENST00000537179 HRCP23327 699 aa23.72■■□□□ 1.39
LPCAT3-206ENST00000537179 USP32Q8NFA0 1604 aa23.7■■□□□ 1.38
LPCAT3-206ENST00000537179 ROBO2Q9HCK4 1378 aa23.69■■□□□ 1.38
LPCAT3-206ENST00000537179 UNC5CLQ8IV45 518 aa23.67■■□□□ 1.38
LPCAT3-206ENST00000537179 PLCH1Q4KWH8 1693 aa23.67■■□□□ 1.38
LPCAT3-206ENST00000537179 CDC42BPGQ6DT37 1551 aa23.66■■□□□ 1.38
LPCAT3-206ENST00000537179 NPHP3Q7Z494 1330 aa23.66■■□□□ 1.38
LPCAT3-206ENST00000537179 ZNF326Q5BKZ1 582 aaKnown RBP23.65■■□□□ 1.38
LPCAT3-206ENST00000537179 PRAG1Q86YV5 1406 aa23.65■■□□□ 1.38
LPCAT3-206ENST00000537179 CLTCL1P53675 1640 aa23.64■■□□□ 1.38
LPCAT3-206ENST00000537179 RGPD1P0DJD0 1748 aa23.64■■□□□ 1.37
LPCAT3-206ENST00000537179 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
LPCAT3-206ENST00000537179 SEPT12Q8IYM1 358 aa23.63■■□□□ 1.37
LPCAT3-206ENST00000537179 KIF1BO60333 1816 aa23.62■■□□□ 1.37
LPCAT3-206ENST00000537179 XPCQ01831 940 aaPredicted RBP23.61■■□□□ 1.37
LPCAT3-206ENST00000537179 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
LPCAT3-206ENST00000537179 BAG6P46379 1132 aa23.59■■□□□ 1.37
LPCAT3-206ENST00000537179 NUP155O75694 1391 aa23.59■■□□□ 1.37
LPCAT3-206ENST00000537179 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
LPCAT3-206ENST00000537179 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
LPCAT3-206ENST00000537179 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
LPCAT3-206ENST00000537179 TNS1Q9HBL0 1735 aaKnown RBP23.57■■□□□ 1.36
LPCAT3-206ENST00000537179 KRT27Q7Z3Y8 459 aa23.57■■□□□ 1.36
LPCAT3-206ENST00000537179 APLP2Q06481 763 aa23.56■■□□□ 1.36
LPCAT3-206ENST00000537179 FOXO3O43524 673 aa23.55■■□□□ 1.36
LPCAT3-206ENST00000537179 YY1P25490 414 aa23.55■■□□□ 1.36
LPCAT3-206ENST00000537179 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
LPCAT3-206ENST00000537179 R3HDM1Q15032 1099 aaKnown RBP23.53■■□□□ 1.36
LPCAT3-206ENST00000537179 VPS72Q15906 364 aa23.53■■□□□ 1.36
LPCAT3-206ENST00000537179 NRAPQ86VF7 1730 aa23.53■■□□□ 1.36
LPCAT3-206ENST00000537179 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
LPCAT3-206ENST00000537179 ONECUT3O60422 494 aaPredicted RBP23.52■■□□□ 1.36
LPCAT3-206ENST00000537179 ROCK1Q13464 1354 aa23.51■■□□□ 1.35
LPCAT3-206ENST00000537179 FMN2Q9NZ56 1722 aa23.5■■□□□ 1.35
LPCAT3-206ENST00000537179 EN1Q05925 392 aaPredicted RBP23.49■■□□□ 1.35
LPCAT3-206ENST00000537179 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
LPCAT3-206ENST00000537179 NAIPQ13075 1403 aa23.48■■□□□ 1.35
LPCAT3-206ENST00000537179 PPLO60437 1756 aa23.47■■□□□ 1.35
LPCAT3-206ENST00000537179 CCDC9Q9Y3X0 531 aaKnown RBP23.47■■□□□ 1.35
LPCAT3-206ENST00000537179 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
LPCAT3-206ENST00000537179 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
LPCAT3-206ENST00000537179 CCDC144AA2RUR9 1427 aa23.46■■□□□ 1.35
LPCAT3-206ENST00000537179 RGPD8O14715 1765 aaPredicted RBP23.45■■□□□ 1.34
LPCAT3-206ENST00000537179 TNS3Q68CZ2 1445 aa23.42■■□□□ 1.34
LPCAT3-206ENST00000537179 A0A0G2JS52 829 aa23.42■■□□□ 1.34
LPCAT3-206ENST00000537179 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
LPCAT3-206ENST00000537179 MYT1Q01538 1121 aa23.42■■□□□ 1.34
LPCAT3-206ENST00000537179 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
LPCAT3-206ENST00000537179 RREB1Q92766 1687 aa23.41■■□□□ 1.34
LPCAT3-206ENST00000537179 KNDC1Q76NI1 1749 aa23.4■■□□□ 1.34
LPCAT3-206ENST00000537179 IFT172Q9UG01 1749 aa23.4■■□□□ 1.34
LPCAT3-206ENST00000537179 HAP1P54257 671 aaPredicted RBP23.4■■□□□ 1.34
LPCAT3-206ENST00000537179 THSD7AQ9UPZ6 1657 aa23.4■■□□□ 1.34
LPCAT3-206ENST00000537179 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.33
LPCAT3-206ENST00000537179 CABLES1Q8TDN4 633 aa23.39■■□□□ 1.33
LPCAT3-206ENST00000537179 FAM98CQ17RN3 349 aaKnown RBP23.38■■□□□ 1.33
LPCAT3-206ENST00000537179 NUP188Q5SRE5 1749 aa23.38■■□□□ 1.33
LPCAT3-206ENST00000537179 FAM182BQ5T319 152 aa23.37■■□□□ 1.33
LPCAT3-206ENST00000537179 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
LPCAT3-206ENST00000537179 CAMTA1Q9Y6Y1 1673 aa23.35■■□□□ 1.33
LPCAT3-206ENST00000537179 KRT28Q7Z3Y7 464 aa23.35■■□□□ 1.33
LPCAT3-206ENST00000537179 TECPR2O15040 1411 aa23.34■■□□□ 1.33
LPCAT3-206ENST00000537179 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
LPCAT3-206ENST00000537179 COL14A1Q05707 1796 aaKnown RBP23.34■■□□□ 1.33
LPCAT3-206ENST00000537179 UTRNP46939 3433 aa23.32■■□□□ 1.32
LPCAT3-206ENST00000537179 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
LPCAT3-206ENST00000537179 FAM83GA6ND36 823 aa23.3■■□□□ 1.32
LPCAT3-206ENST00000537179 WAPLQ7Z5K2 1190 aa23.3■■□□□ 1.32
LPCAT3-206ENST00000537179 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
LPCAT3-206ENST00000537179 SBNO1A3KN83 1393 aa23.28■■□□□ 1.32
LPCAT3-206ENST00000537179 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
LPCAT3-206ENST00000537179 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
LPCAT3-206ENST00000537179 TRPM3Q9HCF6 1732 aaPredicted RBP23.27■■□□□ 1.32
LPCAT3-206ENST00000537179 RPGRIP1LQ68CZ1 1315 aa23.27■■□□□ 1.32
LPCAT3-206ENST00000537179 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.31
LPCAT3-206ENST00000537179 CRYBG1Q9Y4K1 1723 aa23.26■■□□□ 1.31
LPCAT3-206ENST00000537179 BTG4Q9NY30 223 aa23.25■■□□□ 1.31
LPCAT3-206ENST00000537179 ALS2Q96Q42 1657 aa23.25■■□□□ 1.31
LPCAT3-206ENST00000537179 NINLQ9Y2I6 1382 aa23.25■■□□□ 1.31
LPCAT3-206ENST00000537179 PSME1Q06323 249 aa23.24■■□□□ 1.31
LPCAT3-206ENST00000537179 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
LPCAT3-206ENST00000537179 STK26Q9P289 416 aa23.24■■□□□ 1.31
LPCAT3-206ENST00000537179 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
LPCAT3-206ENST00000537179 SPATA31A5Q5VU36 1347 aa23.23■■□□□ 1.31
LPCAT3-206ENST00000537179 SPATA31A7Q8IWB4 1347 aa23.23■■□□□ 1.31
LPCAT3-206ENST00000537179 TRIM37O94972 964 aa23.22■■□□□ 1.31
LPCAT3-206ENST00000537179 ITGAEP38570 1179 aa23.21■■□□□ 1.31
LPCAT3-206ENST00000537179 PPP1R1BQ9UD71 204 aaPredicted RBP23.21■■□□□ 1.31
LPCAT3-206ENST00000537179 ABCC11Q96J66 1382 aa23.21■■□□□ 1.31
LPCAT3-206ENST00000537179 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
LPCAT3-206ENST00000537179 DCAF8L1A6NGE4 600 aa23.2■■□□□ 1.3
LPCAT3-206ENST00000537179 IFFO2Q5TF58 517 aa23.19■■□□□ 1.3
LPCAT3-206ENST00000537179 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
LPCAT3-206ENST00000537179 APBA3O96018 575 aa23.17■■□□□ 1.3
LPCAT3-206ENST00000537179 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
LPCAT3-206ENST00000537179 SENP3-EIF4A1A0A087X0R7 540 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms