RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PTPRMP28827 1452 aa17.98■□□□□ 0.47
SMG6-203ENST00000536871 RIMS2Q9UQ26 1411 aa17.97■□□□□ 0.47
SMG6-203ENST00000536871 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
SMG6-203ENST00000536871 RCAN3Q9UKA8 241 aa17.97■□□□□ 0.47
SMG6-203ENST00000536871 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
SMG6-203ENST00000536871 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
SMG6-203ENST00000536871 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
SMG6-203ENST00000536871 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
SMG6-203ENST00000536871 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
SMG6-203ENST00000536871 POGKQ9P215 609 aa17.95■□□□□ 0.46
SMG6-203ENST00000536871 TERF2IPQ9NYB0 399 aa17.94■□□□□ 0.46
SMG6-203ENST00000536871 RRP1P56182 461 aaKnown RBP17.93■□□□□ 0.46
SMG6-203ENST00000536871 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
SMG6-203ENST00000536871 ABCC11Q96J66 1382 aa17.93■□□□□ 0.46
SMG6-203ENST00000536871 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
SMG6-203ENST00000536871 SIRT1Q96EB6 747 aa17.92■□□□□ 0.46
SMG6-203ENST00000536871 TNRQ92752 1358 aa17.91■□□□□ 0.46
SMG6-203ENST00000536871 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
SMG6-203ENST00000536871 MLECQ14165 292 aa17.91■□□□□ 0.46
SMG6-203ENST00000536871 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
SMG6-203ENST00000536871 MED14O60244 1454 aa17.91■□□□□ 0.46
SMG6-203ENST00000536871 GOLGA2Q08379 1002 aa17.9■□□□□ 0.46
SMG6-203ENST00000536871 STK26Q9P289 416 aa17.9■□□□□ 0.46
SMG6-203ENST00000536871 ZNF521Q96K83 1311 aa17.9■□□□□ 0.46
SMG6-203ENST00000536871 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
SMG6-203ENST00000536871 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
SMG6-203ENST00000536871 SALL2Q9Y467 1007 aaPredicted RBP17.88■□□□□ 0.45
SMG6-203ENST00000536871 NLRP1Q9C000 1473 aa17.87■□□□□ 0.45
SMG6-203ENST00000536871 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
SMG6-203ENST00000536871 A0A1W2PP64 1363 aa17.85■□□□□ 0.45
SMG6-203ENST00000536871 CDCA7LQ96GN5 454 aa17.85■□□□□ 0.45
SMG6-203ENST00000536871 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
SMG6-203ENST00000536871 TECPR2O15040 1411 aa17.85■□□□□ 0.45
SMG6-203ENST00000536871 PLEKHH1Q9ULM0 1364 aa17.84■□□□□ 0.45
SMG6-203ENST00000536871 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
SMG6-203ENST00000536871 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
SMG6-203ENST00000536871 MINK1Q8N4C8 1332 aaPredicted RBP17.84■□□□□ 0.45
SMG6-203ENST00000536871 ATP7BP35670 1465 aa17.83■□□□□ 0.45
SMG6-203ENST00000536871 TMEM2Q9UHN6 1383 aa17.83■□□□□ 0.45
SMG6-203ENST00000536871 E9PSI1 815 aa17.83■□□□□ 0.44
SMG6-203ENST00000536871 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.44
SMG6-203ENST00000536871 CDK19Q9BWU1 502 aa17.83■□□□□ 0.44
SMG6-203ENST00000536871 SLFN5Q08AF3 891 aa17.82■□□□□ 0.44
SMG6-203ENST00000536871 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMG6-203ENST00000536871 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
SMG6-203ENST00000536871 KNDC1Q76NI1 1749 aa17.82■□□□□ 0.44
SMG6-203ENST00000536871 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
SMG6-203ENST00000536871 TRMT2AQ8IZ69 625 aaKnown RBP17.82■□□□□ 0.44
SMG6-203ENST00000536871 APAF1O14727 1248 aa17.8■□□□□ 0.44
SMG6-203ENST00000536871 MTHFSP49914 203 aa17.8■□□□□ 0.44
SMG6-203ENST00000536871 NRXN3Q9Y4C0 1643 aa17.8■□□□□ 0.44
SMG6-203ENST00000536871 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
SMG6-203ENST00000536871 CCDC27Q2M243 656 aa17.79■□□□□ 0.44
SMG6-203ENST00000536871 CD163L1Q9NR16 1453 aa17.79■□□□□ 0.44
SMG6-203ENST00000536871 UBR1Q8IWV7 1749 aa17.78■□□□□ 0.44
SMG6-203ENST00000536871 ANKRD26Q9UPS8 1709 aa17.78■□□□□ 0.44
SMG6-203ENST00000536871 NKTRP30414 1462 aaKnown RBP17.78■□□□□ 0.44
SMG6-203ENST00000536871 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
SMG6-203ENST00000536871 CPS1P31327 1500 aa17.78■□□□□ 0.44
SMG6-203ENST00000536871 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
SMG6-203ENST00000536871 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
SMG6-203ENST00000536871 CCDC146Q8IYE0 955 aa17.77■□□□□ 0.43
SMG6-203ENST00000536871 RBM19Q9Y4C8 960 aaKnown RBP17.76■□□□□ 0.43
SMG6-203ENST00000536871 WASLO00401 505 aaPredicted RBP17.75■□□□□ 0.43
SMG6-203ENST00000536871 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
SMG6-203ENST00000536871 FYB1O15117 783 aa17.75■□□□□ 0.43
SMG6-203ENST00000536871 METP08581 1390 aa17.74■□□□□ 0.43
SMG6-203ENST00000536871 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
SMG6-203ENST00000536871 EID1Q9Y6B2 187 aa17.74■□□□□ 0.43
SMG6-203ENST00000536871 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
SMG6-203ENST00000536871 TNNT2P45379 298 aaPredicted RBP17.73■□□□□ 0.43
SMG6-203ENST00000536871 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SMG6-203ENST00000536871 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
SMG6-203ENST00000536871 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
SMG6-203ENST00000536871 SLIT1O75093 1534 aa17.72■□□□□ 0.43
SMG6-203ENST00000536871 WAPLQ7Z5K2 1190 aa17.71■□□□□ 0.43
SMG6-203ENST00000536871 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.43
SMG6-203ENST00000536871 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
SMG6-203ENST00000536871 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
SMG6-203ENST00000536871 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.42
SMG6-203ENST00000536871 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
SMG6-203ENST00000536871 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
SMG6-203ENST00000536871 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
SMG6-203ENST00000536871 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
SMG6-203ENST00000536871 ARHGAP23Q9P227 1491 aa17.7■□□□□ 0.42
SMG6-203ENST00000536871 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
SMG6-203ENST00000536871 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
SMG6-203ENST00000536871 KIF20BQ96Q89 1820 aa17.69■□□□□ 0.42
SMG6-203ENST00000536871 U2AF1L5P0DN76 240 aaPredicted RBP17.69■□□□□ 0.42
SMG6-203ENST00000536871 U2AF1Q01081 240 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMG6-203ENST00000536871 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
SMG6-203ENST00000536871 COL3A1P02461 1466 aaPredicted RBP17.68■□□□□ 0.42
SMG6-203ENST00000536871 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
SMG6-203ENST00000536871 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
SMG6-203ENST00000536871 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
SMG6-203ENST00000536871 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
SMG6-203ENST00000536871 FANCIQ9NVI1 1328 aa17.67■□□□□ 0.42
SMG6-203ENST00000536871 CT47B1P0C2W7 299 aaPredicted RBP17.67■□□□□ 0.42
SMG6-203ENST00000536871 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
SMG6-203ENST00000536871 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms