RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ADGRF5Q8IZF2 1346 aa26.22■■□□□ 1.79
CCDC61-201ENST00000536603 RBM6P78332 1123 aaKnown RBP26.21■■□□□ 1.79
CCDC61-201ENST00000536603 PTCH1Q13635 1447 aa26.2■■□□□ 1.78
CCDC61-201ENST00000536603 ORAI2Q96SN7 254 aa26.19■■□□□ 1.78
CCDC61-201ENST00000536603 ROBO2Q9HCK4 1378 aa26.18■■□□□ 1.78
CCDC61-201ENST00000536603 IFT172Q9UG01 1749 aa26.16■■□□□ 1.78
CCDC61-201ENST00000536603 RGS12O14924 1447 aa26.15■■□□□ 1.78
CCDC61-201ENST00000536603 LAMC1P11047 1609 aa26.13■■□□□ 1.77
CCDC61-201ENST00000536603 SOS2Q07890 1332 aaPredicted RBP26.13■■□□□ 1.77
CCDC61-201ENST00000536603 USP21Q9UK80 565 aa26.12■■□□□ 1.77
CCDC61-201ENST00000536603 DHX57Q6P158 1386 aaKnown RBP26.11■■□□□ 1.77
CCDC61-201ENST00000536603 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
CCDC61-201ENST00000536603 KDM2AQ9Y2K7 1162 aa26.11■■□□□ 1.77
CCDC61-201ENST00000536603 ESCO1Q5FWF5 840 aa26.09■■□□□ 1.77
CCDC61-201ENST00000536603 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
CCDC61-201ENST00000536603 MYOM2P54296 1465 aa26.07■■□□□ 1.76
CCDC61-201ENST00000536603 TRPC5Q9UL62 973 aaPredicted RBP26.07■■□□□ 1.76
CCDC61-201ENST00000536603 SIN3AQ96ST3 1273 aa26.06■■□□□ 1.76
CCDC61-201ENST00000536603 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
CCDC61-201ENST00000536603 NPHP3Q7Z494 1330 aa26.05■■□□□ 1.76
CCDC61-201ENST00000536603 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
CCDC61-201ENST00000536603 TMEM132EQ6IEE7 984 aa26.04■■□□□ 1.76
CCDC61-201ENST00000536603 C14orf93Q9H972 538 aaKnown RBP26.04■■□□□ 1.76
CCDC61-201ENST00000536603 STK26Q9P289 416 aa26.04■■□□□ 1.76
CCDC61-201ENST00000536603 CFAP70Q5T0N1 1121 aa26.03■■□□□ 1.76
CCDC61-201ENST00000536603 STAC3Q96MF2 364 aa26.03■■□□□ 1.76
CCDC61-201ENST00000536603 ATAD2Q6PL18 1390 aa26.03■■□□□ 1.76
CCDC61-201ENST00000536603 NEUROD1Q13562 356 aa26.02■■□□□ 1.76
CCDC61-201ENST00000536603 CDC42BPGQ6DT37 1551 aa26.02■■□□□ 1.76
CCDC61-201ENST00000536603 COL22A1Q8NFW1 1626 aaPredicted RBP26.02■■□□□ 1.76
CCDC61-201ENST00000536603 NUTM2FA1L443 756 aa26.01■■□□□ 1.75
CCDC61-201ENST00000536603 XPCQ01831 940 aaPredicted RBP26.01■■□□□ 1.75
CCDC61-201ENST00000536603 FNBP4Q8N3X1 1017 aaPredicted RBP26.01■■□□□ 1.75
CCDC61-201ENST00000536603 FOXO3O43524 673 aa26■■□□□ 1.75
CCDC61-201ENST00000536603 WAPLQ7Z5K2 1190 aa25.98■■□□□ 1.75
CCDC61-201ENST00000536603 LRPPRCP42704 1394 aaKnown RBP25.97■■□□□ 1.75
CCDC61-201ENST00000536603 MARF1Q9Y4F3 1742 aaKnown RBP25.96■■□□□ 1.75
CCDC61-201ENST00000536603 PXDNQ92626 1479 aa25.96■■□□□ 1.75
CCDC61-201ENST00000536603 ATRNO75882 1429 aa25.96■■□□□ 1.75
CCDC61-201ENST00000536603 L3MBTL2Q969R5 705 aa25.93■■□□□ 1.74
CCDC61-201ENST00000536603 YTHDC2Q9H6S0 1430 aaKnown RBP25.92■■□□□ 1.74
CCDC61-201ENST00000536603 ABCC11Q96J66 1382 aa25.92■■□□□ 1.74
CCDC61-201ENST00000536603 TECPR2O15040 1411 aa25.9■■□□□ 1.74
CCDC61-201ENST00000536603 KNDC1Q76NI1 1749 aa25.89■■□□□ 1.74
CCDC61-201ENST00000536603 BCL9LQ86UU0 1499 aa25.89■■□□□ 1.73
CCDC61-201ENST00000536603 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
CCDC61-201ENST00000536603 GJD4Q96KN9 370 aaPredicted RBP25.88■■□□□ 1.73
CCDC61-201ENST00000536603 FMN2Q9NZ56 1722 aa25.87■■□□□ 1.73
CCDC61-201ENST00000536603 HAP1P54257 671 aaPredicted RBP25.86■■□□□ 1.73
CCDC61-201ENST00000536603 ZRANB1Q9UGI0 708 aa25.86■■□□□ 1.73
CCDC61-201ENST00000536603 KIF1AQ12756 1690 aa25.86■■□□□ 1.73
CCDC61-201ENST00000536603 ADGRB1O14514 1584 aa25.84■■□□□ 1.73
CCDC61-201ENST00000536603 KRT28Q7Z3Y7 464 aa25.84■■□□□ 1.73
CCDC61-201ENST00000536603 CCDC125Q86Z20 511 aa25.84■■□□□ 1.73
CCDC61-201ENST00000536603 SIRT1Q96EB6 747 aa25.84■■□□□ 1.73
CCDC61-201ENST00000536603 SPATA31A3Q5VYP0 1347 aa25.84■■□□□ 1.73
CCDC61-201ENST00000536603 PLEKHG5O94827 1062 aa25.83■■□□□ 1.73
CCDC61-201ENST00000536603 TRAK1Q9UPV9 953 aa25.83■■□□□ 1.73
CCDC61-201ENST00000536603 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.82■■□□□ 1.72
CCDC61-201ENST00000536603 UNC5CLQ8IV45 518 aa25.81■■□□□ 1.72
CCDC61-201ENST00000536603 RGPD8O14715 1765 aaPredicted RBP25.8■■□□□ 1.72
CCDC61-201ENST00000536603 PRAM1Q96QH2 718 aa25.8■■□□□ 1.72
CCDC61-201ENST00000536603 PSME1Q06323 249 aa25.79■■□□□ 1.72
CCDC61-201ENST00000536603 NBPF1Q3BBV0 1214 aa25.79■■□□□ 1.72
CCDC61-201ENST00000536603 POGKQ9P215 609 aa25.79■■□□□ 1.72
CCDC61-201ENST00000536603 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
CCDC61-201ENST00000536603 LMOD2Q6P5Q4 547 aa25.78■■□□□ 1.72
CCDC61-201ENST00000536603 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
CCDC61-201ENST00000536603 TONSLQ96HA7 1378 aa25.78■■□□□ 1.72
CCDC61-201ENST00000536603 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
CCDC61-201ENST00000536603 RALGAPBQ86X10 1494 aa25.77■■□□□ 1.72
CCDC61-201ENST00000536603 DLC1Q96QB1 1528 aa25.76■■□□□ 1.71
CCDC61-201ENST00000536603 SLIT2O94813 1529 aa25.75■■□□□ 1.71
CCDC61-201ENST00000536603 CCDC9Q9Y3X0 531 aaKnown RBP25.75■■□□□ 1.71
CCDC61-201ENST00000536603 KIAA1210Q9ULL0 1709 aa25.74■■□□□ 1.71
CCDC61-201ENST00000536603 GLI3P10071 1580 aa25.74■■□□□ 1.71
CCDC61-201ENST00000536603 TNS3Q68CZ2 1445 aa25.74■■□□□ 1.71
CCDC61-201ENST00000536603 CABLES1Q8TDN4 633 aa25.74■■□□□ 1.71
CCDC61-201ENST00000536603 SF3B2Q13435 895 aaKnown RBP25.71■■□□□ 1.71
CCDC61-201ENST00000536603 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.71
CCDC61-201ENST00000536603 EP400Q96L91 3159 aa25.7■■□□□ 1.7
CCDC61-201ENST00000536603 NBPF8Q3BBV2 869 aa25.7■■□□□ 1.7
CCDC61-201ENST00000536603 PLCH1Q4KWH8 1693 aa25.69■■□□□ 1.7
CCDC61-201ENST00000536603 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
CCDC61-201ENST00000536603 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
CCDC61-201ENST00000536603 PMFBP1Q8TBY8 1022 aa25.68■■□□□ 1.7
CCDC61-201ENST00000536603 CLSPNQ9HAW4 1339 aa25.67■■□□□ 1.7
CCDC61-201ENST00000536603 VPS72Q15906 364 aa25.67■■□□□ 1.7
CCDC61-201ENST00000536603 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
CCDC61-201ENST00000536603 SBNO1A3KN83 1393 aa25.67■■□□□ 1.7
CCDC61-201ENST00000536603 ARHGEF10O15013 1369 aa25.67■■□□□ 1.7
CCDC61-201ENST00000536603 MINK1Q8N4C8 1332 aaPredicted RBP25.66■■□□□ 1.7
CCDC61-201ENST00000536603 A0A0G2JS52 829 aa25.66■■□□□ 1.7
CCDC61-201ENST00000536603 MYT1Q01538 1121 aa25.66■■□□□ 1.7
CCDC61-201ENST00000536603 HIRIP3Q9BW71 556 aaPredicted RBP25.66■■□□□ 1.7
CCDC61-201ENST00000536603 NWD2Q9ULI1 1742 aa25.66■■□□□ 1.7
CCDC61-201ENST00000536603 TRPM1Q7Z4N2 1603 aa25.64■■□□□ 1.7
CCDC61-201ENST00000536603 ABCA3Q99758 1704 aa25.64■■□□□ 1.7
CCDC61-201ENST00000536603 ROCK2O75116 1388 aaKnown RBP25.64■■□□□ 1.69
CCDC61-201ENST00000536603 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms