RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, human

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-208	ENST00000536582	ADAMTS13	Q76LX8	1427 aa		13.73	□□□□□ -0.21
PAAF1-208	ENST00000536582	ROCK2	O75116	1388 aa	Known RBP	13.73	□□□□□ -0.21
PAAF1-208	ENST00000536582	SETBP1	Q9Y6X0	1596 aa		13.73	□□□□□ -0.21
PAAF1-208	ENST00000536582	CARD11	Q9BXL7	1154 aa		13.72	□□□□□ -0.21
PAAF1-208	ENST00000536582	MET	P08581	1390 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	KIAA1210	Q9ULL0	1709 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	CREBZF	Q9NS37	354 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	TBX22	Q9Y458	520 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	MED14	O60244	1454 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	RALGAPB	Q86X10	1494 aa		13.71	□□□□□ -0.21
PAAF1-208	ENST00000536582	SETD1A	O15047	1707 aa	Known RBP	13.7	□□□□□ -0.22
PAAF1-208	ENST00000536582	TRAK1	Q9UPV9	953 aa		13.7	□□□□□ -0.22
PAAF1-208	ENST00000536582	LAMC1	P11047	1609 aa		13.7	□□□□□ -0.22
PAAF1-208	ENST00000536582	ASXL1	Q8IXJ9	1541 aa		13.69	□□□□□ -0.22
PAAF1-208	ENST00000536582	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.69	□□□□□ -0.22
PAAF1-208	ENST00000536582	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.68	□□□□□ -0.22
PAAF1-208	ENST00000536582	ADGRB1	O14514	1584 aa		13.67	□□□□□ -0.22
PAAF1-208	ENST00000536582	AMOTL2	Q9Y2J4	779 aa		13.67	□□□□□ -0.22
PAAF1-208	ENST00000536582	DIP2A	Q14689	1571 aa		13.66	□□□□□ -0.22
PAAF1-208	ENST00000536582	PTPRU	Q92729	1446 aa		13.66	□□□□□ -0.22
PAAF1-208	ENST00000536582	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.66	□□□□□ -0.22
PAAF1-208	ENST00000536582	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PAAF1-208	ENST00000536582	LRPPRC	P42704	1394 aa	Known RBP	13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	GPRASP1	Q5JY77	1395 aa		13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	USP47	Q96K76	1375 aa		13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	HSPA5	P11021	654 aa	Known RBP	13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	WAPL	Q7Z5K2	1190 aa		13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	RBM33	Q96EV2	1170 aa	Known RBP	13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	CHD2	O14647	1828 aa	Known RBP	13.64	□□□□□ -0.23
PAAF1-208	ENST00000536582	C19orf67	A6NJJ6	358 aa		13.63	□□□□□ -0.23
PAAF1-208	ENST00000536582	KCNA6	P17658	529 aa		13.63	□□□□□ -0.23
PAAF1-208	ENST00000536582	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PAAF1-208	ENST00000536582	POGK	Q9P215	609 aa		13.63	□□□□□ -0.23
PAAF1-208	ENST00000536582	ST20-MTHFS	A0A0A6YYL1	179 aa		13.62	□□□□□ -0.23
PAAF1-208	ENST00000536582	PRAM1	Q96QH2	718 aa		13.62	□□□□□ -0.23
PAAF1-208	ENST00000536582	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.62	□□□□□ -0.23
PAAF1-208	ENST00000536582	ROBO2	Q9HCK4	1378 aa		13.61	□□□□□ -0.23
PAAF1-208	ENST00000536582	STRCP1	A6NGW2	1772 aa		13.61	□□□□□ -0.23
PAAF1-208	ENST00000536582	ABCC11	Q96J66	1382 aa		13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	PIK3R4	Q99570	1358 aa		13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	PLEKHH1	Q9ULM0	1364 aa		13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	EVX2	Q03828	476 aa		13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	SP7	Q8TDD2	431 aa	Predicted RBP	13.6	□□□□□ -0.23
PAAF1-208	ENST00000536582	XRN1	Q8IZH2	1706 aa	Known RBP	13.59	□□□□□ -0.23
PAAF1-208	ENST00000536582	PROSER2	Q86WR7	435 aa	Predicted RBP	13.59	□□□□□ -0.23
PAAF1-208	ENST00000536582	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.59	□□□□□ -0.23
PAAF1-208	ENST00000536582	KNDC1	Q76NI1	1749 aa		13.59	□□□□□ -0.23
PAAF1-208	ENST00000536582	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.58	□□□□□ -0.24
PAAF1-208	ENST00000536582	EIF3A	Q14152	1382 aa	Known RBP	13.58	□□□□□ -0.24
PAAF1-208	ENST00000536582	QRICH2	Q9H0J4	1663 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	CPS1	P31327	1500 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	DLC1	Q96QB1	1528 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	C14orf37	Q86TY3	774 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	NWD1	Q149M9	1564 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	TECPR2	O15040	1411 aa		13.56	□□□□□ -0.24
PAAF1-208	ENST00000536582	MNX1	P50219	401 aa	Predicted RBP	13.55	□□□□□ -0.24
PAAF1-208	ENST00000536582	SIRT1	Q96EB6	747 aa		13.55	□□□□□ -0.24
PAAF1-208	ENST00000536582	POLR3GL	Q9BT43	218 aa		13.55	□□□□□ -0.24
PAAF1-208	ENST00000536582	FAM135B	Q49AJ0	1406 aa		13.54	□□□□□ -0.24
PAAF1-208	ENST00000536582	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.53	□□□□□ -0.24
PAAF1-208	ENST00000536582	TESK2	Q96S53	571 aa		13.53	□□□□□ -0.24
PAAF1-208	ENST00000536582	PTCH1	Q13635	1447 aa		13.53	□□□□□ -0.24
PAAF1-208	ENST00000536582	C11orf95	C9JLR9	678 aa	Predicted RBP	13.52	□□□□□ -0.25
PAAF1-208	ENST00000536582	TMEM94	Q12767	1356 aa		13.52	□□□□□ -0.25
PAAF1-208	ENST00000536582	NKTR	P30414	1462 aa	Known RBP	13.52	□□□□□ -0.25
PAAF1-208	ENST00000536582	NUTM2F	A1L443	756 aa		13.51	□□□□□ -0.25
PAAF1-208	ENST00000536582	LRRC7	Q96NW7	1537 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	DISP3	Q9P2K9	1392 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	MIER1	Q8N108	512 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	CDK19	Q9BWU1	502 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	FBXO3	Q9UK99	471 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	XIRP1	Q702N8	1843 aa	Known RBP	13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	NALCN	Q8IZF0	1738 aa		13.5	□□□□□ -0.25
PAAF1-208	ENST00000536582	CD44	P16070	742 aa	Known RBP	13.49	□□□□□ -0.25
PAAF1-208	ENST00000536582	SRPK2	P78362	688 aa	Known RBP	13.49	□□□□□ -0.25
PAAF1-208	ENST00000536582	TMF1	P82094	1093 aa		13.49	□□□□□ -0.25
PAAF1-208	ENST00000536582	CABP2	Q9NPB3	220 aa		13.49	□□□□□ -0.25
PAAF1-208	ENST00000536582	LTBP4	Q8N2S1	1624 aa		13.49	□□□□□ -0.25
PAAF1-208	ENST00000536582	EVC2	Q86UK5	1308 aa		13.48	□□□□□ -0.25
PAAF1-208	ENST00000536582	WASL	O00401	505 aa	Predicted RBP	13.47	□□□□□ -0.25
PAAF1-208	ENST00000536582	TULP4	Q9NRJ4	1543 aa		13.47	□□□□□ -0.25
PAAF1-208	ENST00000536582	PLEKHG5	O94827	1062 aa		13.46	□□□□□ -0.25
PAAF1-208	ENST00000536582	C19orf44	Q9H6X5	657 aa		13.46	□□□□□ -0.25
PAAF1-208	ENST00000536582	ADGRL3	Q9HAR2	1447 aa		13.46	□□□□□ -0.26
PAAF1-208	ENST00000536582	ATF3	P18847	181 aa		13.45	□□□□□ -0.26
PAAF1-208	ENST00000536582	MSH6	P52701	1360 aa		13.45	□□□□□ -0.26
PAAF1-208	ENST00000536582	SBNO2	Q9Y2G9	1366 aa		13.45	□□□□□ -0.26
PAAF1-208	ENST00000536582	KIF7	Q2M1P5	1343 aa		13.44	□□□□□ -0.26
PAAF1-208	ENST00000536582	WASHC2A	Q641Q2	1341 aa		13.44	□□□□□ -0.26
PAAF1-208	ENST00000536582	CCDC7	Q96M83	1385 aa		13.44	□□□□□ -0.26
PAAF1-208	ENST00000536582	RGPD8	O14715	1765 aa	Predicted RBP	13.43	□□□□□ -0.26
PAAF1-208	ENST00000536582	ADGRB2	O60241	1585 aa		13.43	□□□□□ -0.26
PAAF1-208	ENST00000536582	SLC24A1	O60721	1099 aa		13.43	□□□□□ -0.26
PAAF1-208	ENST00000536582	TMC1	Q8TDI8	760 aa		13.43	□□□□□ -0.26
PAAF1-208	ENST00000536582	NUDT16	Q96DE0	195 aa	Known RBP	13.43	□□□□□ -0.26
PAAF1-208	ENST00000536582	CDCA8	Q53HL2	280 aa		13.42	□□□□□ -0.26
PAAF1-208	ENST00000536582	PLCD3	Q8N3E9	789 aa		13.42	□□□□□ -0.26
PAAF1-208	ENST00000536582	FMN2	Q9NZ56	1722 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms