RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CPSF7-216ENST00000536548 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
CPSF7-216ENST00000536548 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
CPSF7-216ENST00000536548 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
CPSF7-216ENST00000536548 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
CPSF7-216ENST00000536548 NOS1P29475 1434 aa10.58□□□□□ -0.72
CPSF7-216ENST00000536548 GCC2Q8IWJ2 1684 aa10.57□□□□□ -0.72
CPSF7-216ENST00000536548 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-216ENST00000536548 DCCP43146 1447 aa10.57□□□□□ -0.72
CPSF7-216ENST00000536548 R3HDM1Q15032 1099 aaKnown RBP10.56□□□□□ -0.72
CPSF7-216ENST00000536548 RRP7BPQ9NSQ0 103 aa10.56□□□□□ -0.72
CPSF7-216ENST00000536548 NAIPQ13075 1403 aa10.56□□□□□ -0.72
CPSF7-216ENST00000536548 PTCH1Q13635 1447 aa10.56□□□□□ -0.72
CPSF7-216ENST00000536548 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
CPSF7-216ENST00000536548 GLI3P10071 1580 aa10.56□□□□□ -0.72
CPSF7-216ENST00000536548 TRPM2O94759 1503 aa10.55□□□□□ -0.72
CPSF7-216ENST00000536548 EIF4G2P78344 907 aaKnown RBP eCLIP10.55□□□□□ -0.72
CPSF7-216ENST00000536548 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
CPSF7-216ENST00000536548 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
CPSF7-216ENST00000536548 TMEM131LA2VDJ0 1609 aa10.55□□□□□ -0.72
CPSF7-216ENST00000536548 KIF15Q9NS87 1388 aa10.54□□□□□ -0.72
CPSF7-216ENST00000536548 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
CPSF7-216ENST00000536548 MARF1Q9Y4F3 1742 aaKnown RBP10.54□□□□□ -0.72
CPSF7-216ENST00000536548 KANK1Q14678 1352 aa10.53□□□□□ -0.72
CPSF7-216ENST00000536548 PIK3R4Q99570 1358 aa10.53□□□□□ -0.72
CPSF7-216ENST00000536548 UNC13BO14795 1591 aa10.53□□□□□ -0.72
CPSF7-216ENST00000536548 HSPA5P11021 654 aaKnown RBP10.53□□□□□ -0.72
CPSF7-216ENST00000536548 HDGFP51858 240 aaKnown RBP10.53□□□□□ -0.72
CPSF7-216ENST00000536548 RALGAPBQ86X10 1494 aa10.53□□□□□ -0.72
CPSF7-216ENST00000536548 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
CPSF7-216ENST00000536548 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
CPSF7-216ENST00000536548 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
CPSF7-216ENST00000536548 ORAI2Q96SN7 254 aa10.52□□□□□ -0.73
CPSF7-216ENST00000536548 NALCNQ8IZF0 1738 aa10.52□□□□□ -0.73
CPSF7-216ENST00000536548 LMTK2Q8IWU2 1503 aa10.52□□□□□ -0.73
CPSF7-216ENST00000536548 LAMC1P11047 1609 aa10.51□□□□□ -0.73
CPSF7-216ENST00000536548 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-216ENST00000536548 SPHKAPQ2M3C7 1700 aa10.51□□□□□ -0.73
CPSF7-216ENST00000536548 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
CPSF7-216ENST00000536548 EN1Q05925 392 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-216ENST00000536548 SEPT12Q8IYM1 358 aa10.51□□□□□ -0.73
CPSF7-216ENST00000536548 NOP58Q9Y2X3 529 aaKnown RBP10.51□□□□□ -0.73
CPSF7-216ENST00000536548 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
CPSF7-216ENST00000536548 DEKP35659 375 aaKnown RBP10.5□□□□□ -0.73
CPSF7-216ENST00000536548 BAG6P46379 1132 aa10.5□□□□□ -0.73
CPSF7-216ENST00000536548 IRX6P78412 446 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-216ENST00000536548 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.5□□□□□ -0.73
CPSF7-216ENST00000536548 MYOM2P54296 1465 aa10.49□□□□□ -0.73
CPSF7-216ENST00000536548 C1orf167Q5SNV9 1468 aa10.49□□□□□ -0.73
CPSF7-216ENST00000536548 UNC5CLQ8IV45 518 aa10.49□□□□□ -0.73
CPSF7-216ENST00000536548 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.49□□□□□ -0.73
CPSF7-216ENST00000536548 CCDC7Q96M83 1385 aa10.49□□□□□ -0.73
CPSF7-216ENST00000536548 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
CPSF7-216ENST00000536548 KRT27Q7Z3Y8 459 aa10.48□□□□□ -0.73
CPSF7-216ENST00000536548 PRKRIP1Q9H875 184 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-216ENST00000536548 SMG6Q86US8 1419 aaKnown RBP10.48□□□□□ -0.73
CPSF7-216ENST00000536548 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
CPSF7-216ENST00000536548 ANP32AP39687 249 aaKnown RBP10.47□□□□□ -0.73
CPSF7-216ENST00000536548 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-216ENST00000536548 MRS2Q9HD23 443 aa10.47□□□□□ -0.73
CPSF7-216ENST00000536548 GOLGB1Q14789 3259 aaKnown RBP10.46□□□□□ -0.73
CPSF7-216ENST00000536548 XPCQ01831 940 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-216ENST00000536548 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
CPSF7-216ENST00000536548 METP08581 1390 aa10.46□□□□□ -0.74
CPSF7-216ENST00000536548 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
CPSF7-216ENST00000536548 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.74
CPSF7-216ENST00000536548 SLIT2O94813 1529 aa10.45□□□□□ -0.74
CPSF7-216ENST00000536548 RTL5Q5HYW3 569 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-216ENST00000536548 ABCC5O15440 1437 aa10.44□□□□□ -0.74
CPSF7-216ENST00000536548 C1QTNF8P60827 252 aa10.44□□□□□ -0.74
CPSF7-216ENST00000536548 EZH2Q15910 746 aaKnown RBP10.44□□□□□ -0.74
CPSF7-216ENST00000536548 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
CPSF7-216ENST00000536548 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
CPSF7-216ENST00000536548 FAM9BQ8IZU0 186 aa10.43□□□□□ -0.74
CPSF7-216ENST00000536548 CHIC2Q9UKJ5 165 aa10.43□□□□□ -0.74
CPSF7-216ENST00000536548 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
CPSF7-216ENST00000536548 RPRD2Q5VT52 1461 aaKnown RBP10.42□□□□□ -0.74
CPSF7-216ENST00000536548 RGPD1P0DJD0 1748 aa10.42□□□□□ -0.74
CPSF7-216ENST00000536548 A0A0G2JS52 829 aa10.42□□□□□ -0.74
CPSF7-216ENST00000536548 RNF123Q5XPI4 1314 aa10.41□□□□□ -0.74
CPSF7-216ENST00000536548 DCAF8L1A6NGE4 600 aa10.41□□□□□ -0.74
CPSF7-216ENST00000536548 IPO9Q96P70 1041 aaKnown RBP10.41□□□□□ -0.74
CPSF7-216ENST00000536548 NUDCQ9Y266 331 aa10.41□□□□□ -0.74
CPSF7-216ENST00000536548 PXDNQ92626 1479 aa10.41□□□□□ -0.74
CPSF7-216ENST00000536548 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
CPSF7-216ENST00000536548 FOXO3O43524 673 aa10.4□□□□□ -0.74
CPSF7-216ENST00000536548 VPS72Q15906 364 aa10.4□□□□□ -0.74
CPSF7-216ENST00000536548 CCDC136Q96JN2 1154 aa10.4□□□□□ -0.74
CPSF7-216ENST00000536548 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
CPSF7-216ENST00000536548 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-216ENST00000536548 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
CPSF7-216ENST00000536548 ROCK1Q13464 1354 aa10.39□□□□□ -0.75
CPSF7-216ENST00000536548 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
CPSF7-216ENST00000536548 ESCO1Q5FWF5 840 aa10.39□□□□□ -0.75
CPSF7-216ENST00000536548 L3MBTL2Q969R5 705 aa10.39□□□□□ -0.75
CPSF7-216ENST00000536548 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
CPSF7-216ENST00000536548 USP32Q8NFA0 1604 aa10.38□□□□□ -0.75
CPSF7-216ENST00000536548 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
CPSF7-216ENST00000536548 CAMKK2Q96RR4 588 aa10.38□□□□□ -0.75
CPSF7-216ENST00000536548 DAPK1P53355 1430 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms