RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.78□□□□□ -0.68
ABCA4-207ENST00000536513 CGNL1Q0VF96 1302 aa10.77□□□□□ -0.69
ABCA4-207ENST00000536513 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
ABCA4-207ENST00000536513 CEP152O94986 1710 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 NUDT16Q96DE0 195 aaKnown RBP10.76□□□□□ -0.69
ABCA4-207ENST00000536513 NSD3Q9BZ95 1437 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
ABCA4-207ENST00000536513 SCAF11Q99590 1463 aaKnown RBP10.76□□□□□ -0.69
ABCA4-207ENST00000536513 RPGRIP1LQ68CZ1 1315 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 RIMS2Q9UQ26 1411 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 ANKLE2Q86XL3 938 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 ABCA6Q8N139 1617 aa10.76□□□□□ -0.69
ABCA4-207ENST00000536513 KCNA6P17658 529 aa10.75□□□□□ -0.69
ABCA4-207ENST00000536513 E9PCH4 1651 aa10.75□□□□□ -0.69
ABCA4-207ENST00000536513 PROSER2Q86WR7 435 aaPredicted RBP10.75□□□□□ -0.69
ABCA4-207ENST00000536513 NOP58Q9Y2X3 529 aaKnown RBP10.75□□□□□ -0.69
ABCA4-207ENST00000536513 CLTCL1P53675 1640 aa10.75□□□□□ -0.69
ABCA4-207ENST00000536513 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
ABCA4-207ENST00000536513 DIP2BQ9P265 1576 aa10.75□□□□□ -0.69
ABCA4-207ENST00000536513 MAPK8IP3Q9UPT6 1336 aa10.74□□□□□ -0.69
ABCA4-207ENST00000536513 FOXO3O43524 673 aa10.74□□□□□ -0.69
ABCA4-207ENST00000536513 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
ABCA4-207ENST00000536513 CLUAP1Q96AJ1 413 aa10.74□□□□□ -0.69
ABCA4-207ENST00000536513 ABCC3O15438 1527 aa10.74□□□□□ -0.69
ABCA4-207ENST00000536513 METP08581 1390 aa10.73□□□□□ -0.69
ABCA4-207ENST00000536513 EMILIN1Q9Y6C2 1016 aa10.73□□□□□ -0.69
ABCA4-207ENST00000536513 NLRP6P59044 892 aa10.73□□□□□ -0.69
ABCA4-207ENST00000536513 DDX17Q92841 729 aaKnown RBP10.73□□□□□ -0.69
ABCA4-207ENST00000536513 STAC3Q96MF2 364 aa10.73□□□□□ -0.69
ABCA4-207ENST00000536513 KDM5DQ9BY66 1539 aa10.73□□□□□ -0.69
ABCA4-207ENST00000536513 COG3Q96JB2 828 aa10.72□□□□□ -0.69
ABCA4-207ENST00000536513 DIP2CQ9Y2E4 1556 aa10.72□□□□□ -0.69
ABCA4-207ENST00000536513 PSME1Q06323 249 aa10.72□□□□□ -0.69
ABCA4-207ENST00000536513 NUDCQ9Y266 331 aa10.72□□□□□ -0.69
ABCA4-207ENST00000536513 IQGAP3Q86VI3 1631 aa10.72□□□□□ -0.69
ABCA4-207ENST00000536513 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
ABCA4-207ENST00000536513 BCORL1Q5H9F3 1711 aa10.71□□□□□ -0.69
ABCA4-207ENST00000536513 AMPHP49418 695 aa10.71□□□□□ -0.69
ABCA4-207ENST00000536513 PTPRTO14522 1441 aa10.71□□□□□ -0.69
ABCA4-207ENST00000536513 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.69
ABCA4-207ENST00000536513 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
ABCA4-207ENST00000536513 ABTB2Q8N961 1025 aa10.71□□□□□ -0.7
ABCA4-207ENST00000536513 ZNF428Q96B54 188 aa10.71□□□□□ -0.7
ABCA4-207ENST00000536513 PPRC1Q5VV67 1664 aaKnown RBP10.71□□□□□ -0.7
ABCA4-207ENST00000536513 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
ABCA4-207ENST00000536513 ARAP3Q8WWN8 1544 aa10.7□□□□□ -0.7
ABCA4-207ENST00000536513 FRMPD1Q5SYB0 1578 aa10.7□□□□□ -0.7
ABCA4-207ENST00000536513 EFCAB6Q5THR3 1501 aa10.7□□□□□ -0.7
ABCA4-207ENST00000536513 UNC13BO14795 1591 aa10.7□□□□□ -0.7
ABCA4-207ENST00000536513 RCAN3Q9UKA8 241 aa10.69□□□□□ -0.7
ABCA4-207ENST00000536513 TRPM2O94759 1503 aa10.69□□□□□ -0.7
ABCA4-207ENST00000536513 FYB1O15117 783 aa10.69□□□□□ -0.7
ABCA4-207ENST00000536513 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
ABCA4-207ENST00000536513 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
ABCA4-207ENST00000536513 YTHDC2Q9H6S0 1430 aaKnown RBP10.68□□□□□ -0.7
ABCA4-207ENST00000536513 MSH5O43196 834 aa10.68□□□□□ -0.7
ABCA4-207ENST00000536513 TSR2Q969E8 191 aaKnown RBP10.68□□□□□ -0.7
ABCA4-207ENST00000536513 ZBED9Q6R2W3 1325 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
ABCA4-207ENST00000536513 ZC3H6P61129 1189 aaKnown RBP10.67□□□□□ -0.7
ABCA4-207ENST00000536513 PDE4CQ08493 712 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 ACEP12821 1306 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 CFAP74Q9C0B2 1584 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 DIAPH1O60610 1272 aaKnown RBP10.67□□□□□ -0.7
ABCA4-207ENST00000536513 DCTN1Q14203 1278 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 KDM5CP41229 1560 aa10.67□□□□□ -0.7
ABCA4-207ENST00000536513 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 SKAP1Q86WV1 359 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 PPP6R1Q9UPN7 881 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 TET3O43151 1660 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 ERVK-7P63135 1459 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
ABCA4-207ENST00000536513 PRKAR2BP31323 418 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 SPHKAPQ2M3C7 1700 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 RIPK4P57078 832 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 GPRASP1Q5JY77 1395 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 EXOC6Q8TAG9 804 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.7
ABCA4-207ENST00000536513 BRD4O60885 1362 aaPredicted RBP10.65□□□□□ -0.71
ABCA4-207ENST00000536513 PKNOX2Q96KN3 472 aa10.65□□□□□ -0.71
ABCA4-207ENST00000536513 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.71
ABCA4-207ENST00000536513 ATF3P18847 181 aa10.64□□□□□ -0.71
ABCA4-207ENST00000536513 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 CLTCQ00610 1675 aaKnown RBP10.63□□□□□ -0.71
ABCA4-207ENST00000536513 HSP90AB2PQ58FF8 381 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 SULT6B1Q6IMI4 303 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 MIS18AQ9NYP9 233 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 KIF1BO60333 1816 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 BCAR3O75815 825 aa10.63□□□□□ -0.71
ABCA4-207ENST00000536513 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
ABCA4-207ENST00000536513 ROBO2Q9HCK4 1378 aa10.62□□□□□ -0.71
ABCA4-207ENST00000536513 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
ABCA4-207ENST00000536513 RGS3P49796 1198 aa10.62□□□□□ -0.71
ABCA4-207ENST00000536513 MROH1Q8NDA8 1641 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms