RNA–Protein interactions for RNA: ENST00000536408.2

TCHP-203, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-203ENST00000536408 AFF2P51816 1311 aa13.47□□□□□ -0.25
TCHP-203ENST00000536408 LRPPRCP42704 1394 aaKnown RBP13.46□□□□□ -0.25
TCHP-203ENST00000536408 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
TCHP-203ENST00000536408 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
TCHP-203ENST00000536408 CFAP70Q5T0N1 1121 aa13.46□□□□□ -0.25
TCHP-203ENST00000536408 IFT172Q9UG01 1749 aa13.46□□□□□ -0.25
TCHP-203ENST00000536408 PIK3C2GO75747 1445 aa13.46□□□□□ -0.26
TCHP-203ENST00000536408 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
TCHP-203ENST00000536408 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
TCHP-203ENST00000536408 RXRBP28702 533 aa13.44□□□□□ -0.26
TCHP-203ENST00000536408 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
TCHP-203ENST00000536408 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
TCHP-203ENST00000536408 FOXO3O43524 673 aa13.43□□□□□ -0.26
TCHP-203ENST00000536408 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
TCHP-203ENST00000536408 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
TCHP-203ENST00000536408 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
TCHP-203ENST00000536408 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
TCHP-203ENST00000536408 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
TCHP-203ENST00000536408 NPHP3Q7Z494 1330 aa13.41□□□□□ -0.26
TCHP-203ENST00000536408 CDC42BPGQ6DT37 1551 aa13.41□□□□□ -0.26
TCHP-203ENST00000536408 TECPR2O15040 1411 aa13.41□□□□□ -0.26
TCHP-203ENST00000536408 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
TCHP-203ENST00000536408 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
TCHP-203ENST00000536408 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
TCHP-203ENST00000536408 DCAF11Q8TEB1 546 aa13.4□□□□□ -0.26
TCHP-203ENST00000536408 POGKQ9P215 609 aa13.4□□□□□ -0.26
TCHP-203ENST00000536408 MYOM2P54296 1465 aa13.38□□□□□ -0.27
TCHP-203ENST00000536408 USP21Q9UK80 565 aa13.38□□□□□ -0.27
TCHP-203ENST00000536408 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
TCHP-203ENST00000536408 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
TCHP-203ENST00000536408 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
TCHP-203ENST00000536408 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
TCHP-203ENST00000536408 PXDNQ92626 1479 aa13.36□□□□□ -0.27
TCHP-203ENST00000536408 LAMC1P11047 1609 aa13.36□□□□□ -0.27
TCHP-203ENST00000536408 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
TCHP-203ENST00000536408 LMOD2Q6P5Q4 547 aa13.36□□□□□ -0.27
TCHP-203ENST00000536408 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
TCHP-203ENST00000536408 UPF1Q92900 1129 aaKnown RBP eCLIP13.35□□□□□ -0.27
TCHP-203ENST00000536408 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
TCHP-203ENST00000536408 FMN2Q9NZ56 1722 aa13.35□□□□□ -0.27
TCHP-203ENST00000536408 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
TCHP-203ENST00000536408 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
TCHP-203ENST00000536408 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
TCHP-203ENST00000536408 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
TCHP-203ENST00000536408 RGS12O14924 1447 aa13.33□□□□□ -0.28
TCHP-203ENST00000536408 PSME1Q06323 249 aa13.32□□□□□ -0.28
TCHP-203ENST00000536408 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
TCHP-203ENST00000536408 SPATA31A3Q5VYP0 1347 aa13.32□□□□□ -0.28
TCHP-203ENST00000536408 HRCP23327 699 aa13.31□□□□□ -0.28
TCHP-203ENST00000536408 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
TCHP-203ENST00000536408 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
TCHP-203ENST00000536408 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
TCHP-203ENST00000536408 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
TCHP-203ENST00000536408 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
TCHP-203ENST00000536408 ADGRB1O14514 1584 aa13.3□□□□□ -0.28
TCHP-203ENST00000536408 KIF1AQ12756 1690 aa13.3□□□□□ -0.28
TCHP-203ENST00000536408 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
TCHP-203ENST00000536408 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
TCHP-203ENST00000536408 WASLO00401 505 aaPredicted RBP13.26□□□□□ -0.29
TCHP-203ENST00000536408 ATRNO75882 1429 aa13.26□□□□□ -0.29
TCHP-203ENST00000536408 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
TCHP-203ENST00000536408 BCL9LQ86UU0 1499 aa13.26□□□□□ -0.29
TCHP-203ENST00000536408 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
TCHP-203ENST00000536408 PRR36Q9H6K5 1346 aa13.26□□□□□ -0.29
TCHP-203ENST00000536408 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
TCHP-203ENST00000536408 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
TCHP-203ENST00000536408 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
TCHP-203ENST00000536408 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
TCHP-203ENST00000536408 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
TCHP-203ENST00000536408 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
TCHP-203ENST00000536408 STAC3Q96MF2 364 aa13.24□□□□□ -0.29
TCHP-203ENST00000536408 SBNO1A3KN83 1393 aa13.23□□□□□ -0.29
TCHP-203ENST00000536408 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
TCHP-203ENST00000536408 ATAD2Q6PL18 1390 aa13.23□□□□□ -0.29
TCHP-203ENST00000536408 MARF1Q9Y4F3 1742 aaKnown RBP13.23□□□□□ -0.29
TCHP-203ENST00000536408 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
TCHP-203ENST00000536408 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
TCHP-203ENST00000536408 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
TCHP-203ENST00000536408 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
TCHP-203ENST00000536408 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
TCHP-203ENST00000536408 CDK19Q9BWU1 502 aa13.22□□□□□ -0.29
TCHP-203ENST00000536408 TULP4Q9NRJ4 1543 aa13.22□□□□□ -0.29
TCHP-203ENST00000536408 A0A0G2JS52 829 aa13.21□□□□□ -0.29
TCHP-203ENST00000536408 MYT1Q01538 1121 aa13.21□□□□□ -0.29
TCHP-203ENST00000536408 SIN3AQ96ST3 1273 aa13.21□□□□□ -0.29
TCHP-203ENST00000536408 SLIT2O94813 1529 aa13.2□□□□□ -0.3
TCHP-203ENST00000536408 ARHGEF28Q8N1W1 1705 aaKnown RBP13.2□□□□□ -0.3
TCHP-203ENST00000536408 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
TCHP-203ENST00000536408 RALGAPBQ86X10 1494 aa13.2□□□□□ -0.3
TCHP-203ENST00000536408 EP400Q96L91 3159 aa13.2□□□□□ -0.3
TCHP-203ENST00000536408 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
TCHP-203ENST00000536408 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
TCHP-203ENST00000536408 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
TCHP-203ENST00000536408 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
TCHP-203ENST00000536408 GLI3P10071 1580 aa13.17□□□□□ -0.3
TCHP-203ENST00000536408 VPS72Q15906 364 aa13.17□□□□□ -0.3
TCHP-203ENST00000536408 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
TCHP-203ENST00000536408 ATP7BP35670 1465 aa13.16□□□□□ -0.3
TCHP-203ENST00000536408 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
TCHP-203ENST00000536408 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms