RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 ATF3P18847 181 aa18.53■□□□□ 0.56
DDB1-207ENST00000535967 DSG3P32926 999 aa18.53■□□□□ 0.56
DDB1-207ENST00000535967 SETBP1Q9Y6X0 1596 aa18.53■□□□□ 0.56
DDB1-207ENST00000535967 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.56
DDB1-207ENST00000535967 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
DDB1-207ENST00000535967 ASXL1Q8IXJ9 1541 aa18.51■□□□□ 0.55
DDB1-207ENST00000535967 ZNF326Q5BKZ1 582 aaKnown RBP18.5■□□□□ 0.55
DDB1-207ENST00000535967 LAMC1P11047 1609 aa18.49■□□□□ 0.55
DDB1-207ENST00000535967 UPF1Q92900 1129 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDB1-207ENST00000535967 MST1RQ04912 1400 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 MYOM2P54296 1465 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 NHSL1Q5SYE7 1610 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 DCCP43146 1447 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 METP08581 1390 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 NUTM2BA6NNL0 878 aaPredicted RBP18.48■□□□□ 0.55
DDB1-207ENST00000535967 NUTM2EB1AL46 878 aaPredicted RBP18.48■□□□□ 0.55
DDB1-207ENST00000535967 POLA2Q14181 598 aa18.48■□□□□ 0.55
DDB1-207ENST00000535967 ZNF772Q68DY9 489 aaPredicted RBP18.48■□□□□ 0.55
DDB1-207ENST00000535967 NUTM2AQ8IVF1 878 aaPredicted RBP18.48■□□□□ 0.55
DDB1-207ENST00000535967 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
DDB1-207ENST00000535967 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
DDB1-207ENST00000535967 AFF2P51816 1311 aa18.42■□□□□ 0.54
DDB1-207ENST00000535967 NRXN1Q9ULB1 1477 aa18.42■□□□□ 0.54
DDB1-207ENST00000535967 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
DDB1-207ENST00000535967 RXRBP28702 533 aa18.42■□□□□ 0.54
DDB1-207ENST00000535967 ADGRL3Q9HAR2 1447 aa18.41■□□□□ 0.54
DDB1-207ENST00000535967 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
DDB1-207ENST00000535967 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
DDB1-207ENST00000535967 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
DDB1-207ENST00000535967 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
DDB1-207ENST00000535967 PNPLA6Q8IY17 1366 aa18.39■□□□□ 0.54
DDB1-207ENST00000535967 RGS12O14924 1447 aa18.38■□□□□ 0.53
DDB1-207ENST00000535967 KNDC1Q76NI1 1749 aa18.38■□□□□ 0.53
DDB1-207ENST00000535967 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
DDB1-207ENST00000535967 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
DDB1-207ENST00000535967 C8orf37Q96NL8 207 aa18.36■□□□□ 0.53
DDB1-207ENST00000535967 SRCAPQ6ZRS2 3230 aa18.36■□□□□ 0.53
DDB1-207ENST00000535967 LRRC59Q96AG4 307 aaKnown RBP18.35■□□□□ 0.53
DDB1-207ENST00000535967 C1orf167Q5SNV9 1468 aa18.35■□□□□ 0.53
DDB1-207ENST00000535967 ADGRF5Q8IZF2 1346 aa18.33■□□□□ 0.52
DDB1-207ENST00000535967 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.52
DDB1-207ENST00000535967 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
DDB1-207ENST00000535967 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
DDB1-207ENST00000535967 QTRT2Q9H974 415 aaKnown RBP18.32■□□□□ 0.52
DDB1-207ENST00000535967 ADAMTS2O95450 1211 aa18.31■□□□□ 0.52
DDB1-207ENST00000535967 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
DDB1-207ENST00000535967 PTCH1Q13635 1447 aa18.3■□□□□ 0.52
DDB1-207ENST00000535967 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
DDB1-207ENST00000535967 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
DDB1-207ENST00000535967 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
DDB1-207ENST00000535967 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
DDB1-207ENST00000535967 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
DDB1-207ENST00000535967 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
DDB1-207ENST00000535967 ADGRB1O14514 1584 aa18.27■□□□□ 0.51
DDB1-207ENST00000535967 NGLY1Q96IV0 654 aa18.26■□□□□ 0.51
DDB1-207ENST00000535967 EP400Q96L91 3159 aa18.25■□□□□ 0.51
DDB1-207ENST00000535967 TECPR2O15040 1411 aa18.24■□□□□ 0.51
DDB1-207ENST00000535967 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
DDB1-207ENST00000535967 L3MBTL2Q969R5 705 aa18.23■□□□□ 0.51
DDB1-207ENST00000535967 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
DDB1-207ENST00000535967 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
DDB1-207ENST00000535967 ARHGEF28Q8N1W1 1705 aaKnown RBP18.23■□□□□ 0.51
DDB1-207ENST00000535967 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
DDB1-207ENST00000535967 DLC1Q96QB1 1528 aa18.22■□□□□ 0.51
DDB1-207ENST00000535967 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
DDB1-207ENST00000535967 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
DDB1-207ENST00000535967 USP21Q9UK80 565 aa18.21■□□□□ 0.51
DDB1-207ENST00000535967 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
DDB1-207ENST00000535967 PXDNQ92626 1479 aa18.19■□□□□ 0.5
DDB1-207ENST00000535967 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
DDB1-207ENST00000535967 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
DDB1-207ENST00000535967 TIMELESSQ9UNS1 1208 aa18.19■□□□□ 0.5
DDB1-207ENST00000535967 ATRNO75882 1429 aa18.19■□□□□ 0.5
DDB1-207ENST00000535967 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
DDB1-207ENST00000535967 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
DDB1-207ENST00000535967 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
DDB1-207ENST00000535967 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
DDB1-207ENST00000535967 MKRN4PQ13434 485 aaPredicted RBP18.16■□□□□ 0.5
DDB1-207ENST00000535967 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
DDB1-207ENST00000535967 BCL9LQ86UU0 1499 aa18.16■□□□□ 0.5
DDB1-207ENST00000535967 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
DDB1-207ENST00000535967 ESCO1Q5FWF5 840 aa18.15■□□□□ 0.5
DDB1-207ENST00000535967 ADGRB2O60241 1585 aa18.14■□□□□ 0.49
DDB1-207ENST00000535967 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
DDB1-207ENST00000535967 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
DDB1-207ENST00000535967 FOXO3O43524 673 aa18.13■□□□□ 0.49
DDB1-207ENST00000535967 TMEM132EQ6IEE7 984 aa18.13■□□□□ 0.49
DDB1-207ENST00000535967 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
DDB1-207ENST00000535967 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
DDB1-207ENST00000535967 QRICH2Q9H0J4 1663 aa18.12■□□□□ 0.49
DDB1-207ENST00000535967 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
DDB1-207ENST00000535967 STK26Q9P289 416 aa18.11■□□□□ 0.49
DDB1-207ENST00000535967 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
DDB1-207ENST00000535967 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
DDB1-207ENST00000535967 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.09■□□□□ 0.49
DDB1-207ENST00000535967 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
DDB1-207ENST00000535967 GLI3P10071 1580 aa18.08■□□□□ 0.48
DDB1-207ENST00000535967 NBPF8Q3BBV2 869 aa18.07■□□□□ 0.48
DDB1-207ENST00000535967 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
DDB1-207ENST00000535967 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms