RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PUS7Q96PZ0 661 aaKnown RBP22.74■■□□□ 1.23
VAMP1-205ENST00000535927 PRAM1Q96QH2 718 aa22.74■■□□□ 1.23
VAMP1-205ENST00000535927 SCAF1Q9H7N4 1312 aaKnown RBP22.73■■□□□ 1.23
VAMP1-205ENST00000535927 ROBO2Q9HCK4 1378 aa22.73■■□□□ 1.23
VAMP1-205ENST00000535927 PROSER2Q86WR7 435 aaPredicted RBP22.72■■□□□ 1.23
VAMP1-205ENST00000535927 TMF1P82094 1093 aa22.7■■□□□ 1.22
VAMP1-205ENST00000535927 TESK2Q96S53 571 aa22.7■■□□□ 1.22
VAMP1-205ENST00000535927 WAPLQ7Z5K2 1190 aa22.68■■□□□ 1.22
VAMP1-205ENST00000535927 EVC2Q86UK5 1308 aa22.67■■□□□ 1.22
VAMP1-205ENST00000535927 TOM1O60784 492 aa22.67■■□□□ 1.22
VAMP1-205ENST00000535927 PIP4K2BP78356 416 aa22.67■■□□□ 1.22
VAMP1-205ENST00000535927 QRICH2Q9H0J4 1663 aa22.67■■□□□ 1.22
VAMP1-205ENST00000535927 STRCP1A6NGW2 1772 aa22.66■■□□□ 1.22
VAMP1-205ENST00000535927 HSPA1LP34931 641 aa22.65■■□□□ 1.22
VAMP1-205ENST00000535927 C19orf44Q9H6X5 657 aa22.65■■□□□ 1.22
VAMP1-205ENST00000535927 ADGRB2O60241 1585 aa22.64■■□□□ 1.22
VAMP1-205ENST00000535927 ADGRL3Q9HAR2 1447 aa22.63■■□□□ 1.21
VAMP1-205ENST00000535927 PLEKHH1Q9ULM0 1364 aa22.63■■□□□ 1.21
VAMP1-205ENST00000535927 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
VAMP1-205ENST00000535927 DCCP43146 1447 aa22.62■■□□□ 1.21
VAMP1-205ENST00000535927 TMEM94Q12767 1356 aa22.62■■□□□ 1.21
VAMP1-205ENST00000535927 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
VAMP1-205ENST00000535927 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
VAMP1-205ENST00000535927 MED1Q15648 1581 aaPredicted RBP22.61■■□□□ 1.21
VAMP1-205ENST00000535927 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.6■■□□□ 1.21
VAMP1-205ENST00000535927 MINK1Q8N4C8 1332 aaPredicted RBP22.59■■□□□ 1.21
VAMP1-205ENST00000535927 SAFB2Q14151 953 aaKnown RBP eCLIP22.59■■□□□ 1.21
VAMP1-205ENST00000535927 C14orf37Q86TY3 774 aa22.59■■□□□ 1.21
VAMP1-205ENST00000535927 MSH6P52701 1360 aa22.58■■□□□ 1.21
VAMP1-205ENST00000535927 CADPS2Q86UW7 1296 aa22.57■■□□□ 1.2
VAMP1-205ENST00000535927 CDC42BPGQ6DT37 1551 aa22.57■■□□□ 1.2
VAMP1-205ENST00000535927 ATAD2Q6PL18 1390 aa22.56■■□□□ 1.2
VAMP1-205ENST00000535927 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
VAMP1-205ENST00000535927 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
VAMP1-205ENST00000535927 ATF3P18847 181 aa22.54■■□□□ 1.2
VAMP1-205ENST00000535927 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
VAMP1-205ENST00000535927 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
VAMP1-205ENST00000535927 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
VAMP1-205ENST00000535927 SRPK2P78362 688 aaKnown RBP22.53■■□□□ 1.2
VAMP1-205ENST00000535927 XIRP1Q702N8 1843 aaKnown RBP22.52■■□□□ 1.2
VAMP1-205ENST00000535927 NALCNQ8IZF0 1738 aa22.52■■□□□ 1.2
VAMP1-205ENST00000535927 TULP4Q9NRJ4 1543 aa22.52■■□□□ 1.19
VAMP1-205ENST00000535927 CCDC61Q9Y6R9 512 aa22.51■■□□□ 1.19
VAMP1-205ENST00000535927 CCDC7Q96M83 1385 aa22.5■■□□□ 1.19
VAMP1-205ENST00000535927 KIF7Q2M1P5 1343 aa22.49■■□□□ 1.19
VAMP1-205ENST00000535927 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
VAMP1-205ENST00000535927 NUDT16Q96DE0 195 aaKnown RBP22.48■■□□□ 1.19
VAMP1-205ENST00000535927 C11orf95C9JLR9 678 aaPredicted RBP22.47■■□□□ 1.19
VAMP1-205ENST00000535927 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
VAMP1-205ENST00000535927 CABP2Q9NPB3 220 aa22.46■■□□□ 1.19
VAMP1-205ENST00000535927 PLEKHG3A1L390 1219 aa22.45■■□□□ 1.18
VAMP1-205ENST00000535927 ITSN1Q15811 1721 aa22.45■■□□□ 1.18
VAMP1-205ENST00000535927 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
VAMP1-205ENST00000535927 ZNF692Q9BU19 519 aaPredicted RBP22.43■■□□□ 1.18
VAMP1-205ENST00000535927 TERF2IPQ9NYB0 399 aa22.42■■□□□ 1.18
VAMP1-205ENST00000535927 ATP7BP35670 1465 aa22.41■■□□□ 1.18
VAMP1-205ENST00000535927 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
VAMP1-205ENST00000535927 C1orf167Q5SNV9 1468 aa22.4■■□□□ 1.18
VAMP1-205ENST00000535927 MST1RQ04912 1400 aa22.4■■□□□ 1.18
VAMP1-205ENST00000535927 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.18
VAMP1-205ENST00000535927 PRR36Q9H6K5 1346 aa22.38■■□□□ 1.17
VAMP1-205ENST00000535927 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
VAMP1-205ENST00000535927 PPIP5K1Q6PFW1 1433 aa22.38■■□□□ 1.17
VAMP1-205ENST00000535927 TOPAZ1Q8N9V7 1692 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 CABP1Q9NZU7 370 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 PHF8Q9UPP1 1060 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 USP32Q8NFA0 1604 aa22.37■■□□□ 1.17
VAMP1-205ENST00000535927 POLR3AO14802 1390 aaPredicted RBP22.36■■□□□ 1.17
VAMP1-205ENST00000535927 ANKRD36BQ8N2N9 1353 aa22.36■■□□□ 1.17
VAMP1-205ENST00000535927 KIF1AQ12756 1690 aa22.36■■□□□ 1.17
VAMP1-205ENST00000535927 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
VAMP1-205ENST00000535927 SLC12A5Q9H2X9 1139 aa22.35■■□□□ 1.17
VAMP1-205ENST00000535927 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
VAMP1-205ENST00000535927 MYOM1P52179 1685 aa22.33■■□□□ 1.16
VAMP1-205ENST00000535927 CPSF1Q10570 1443 aaKnown RBP22.32■■□□□ 1.16
VAMP1-205ENST00000535927 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
VAMP1-205ENST00000535927 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
VAMP1-205ENST00000535927 PANK3Q9H999 370 aa22.31■■□□□ 1.16
VAMP1-205ENST00000535927 ACEP12821 1306 aa22.3■■□□□ 1.16
VAMP1-205ENST00000535927 DDX10Q13206 875 aaKnown RBP22.29■■□□□ 1.16
VAMP1-205ENST00000535927 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
VAMP1-205ENST00000535927 PSME1Q06323 249 aa22.28■■□□□ 1.16
VAMP1-205ENST00000535927 ORAI2Q96SN7 254 aa22.28■■□□□ 1.16
VAMP1-205ENST00000535927 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
VAMP1-205ENST00000535927 BRINP3Q76B58 766 aa22.27■■□□□ 1.16
VAMP1-205ENST00000535927 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
VAMP1-205ENST00000535927 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
VAMP1-205ENST00000535927 PER1O15534 1290 aaPredicted RBP22.26■■□□□ 1.15
VAMP1-205ENST00000535927 CD163L1Q9NR16 1453 aa22.26■■□□□ 1.15
VAMP1-205ENST00000535927 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
VAMP1-205ENST00000535927 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
VAMP1-205ENST00000535927 EDC4Q6P2E9 1401 aaKnown RBP22.25■■□□□ 1.15
VAMP1-205ENST00000535927 PMFBP1Q8TBY8 1022 aa22.25■■□□□ 1.15
VAMP1-205ENST00000535927 TTC21AQ8NDW8 1320 aa22.25■■□□□ 1.15
VAMP1-205ENST00000535927 USP6P35125 1406 aa22.23■■□□□ 1.15
VAMP1-205ENST00000535927 CGNL1Q0VF96 1302 aa22.23■■□□□ 1.15
VAMP1-205ENST00000535927 MON2Q7Z3U7 1717 aa22.23■■□□□ 1.15
VAMP1-205ENST00000535927 FOXO3O43524 673 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms