RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 BLMP54132 1417 aaPredicted RBP13.75□□□□□ -0.21
LRTOMT-211ENST00000535883 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
LRTOMT-211ENST00000535883 PSDA5PKW4 1024 aaPredicted RBP13.74□□□□□ -0.21
LRTOMT-211ENST00000535883 FOXO3O43524 673 aa13.73□□□□□ -0.21
LRTOMT-211ENST00000535883 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
LRTOMT-211ENST00000535883 SLIT2O94813 1529 aa13.73□□□□□ -0.21
LRTOMT-211ENST00000535883 HRCP23327 699 aa13.72□□□□□ -0.21
LRTOMT-211ENST00000535883 APLP2Q06481 763 aa13.72□□□□□ -0.21
LRTOMT-211ENST00000535883 FOXD1Q16676 465 aa13.72□□□□□ -0.21
LRTOMT-211ENST00000535883 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
LRTOMT-211ENST00000535883 LRP5O75197 1615 aa13.72□□□□□ -0.21
LRTOMT-211ENST00000535883 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
LRTOMT-211ENST00000535883 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.21
LRTOMT-211ENST00000535883 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
LRTOMT-211ENST00000535883 CLTCL1P53675 1640 aa13.7□□□□□ -0.22
LRTOMT-211ENST00000535883 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
LRTOMT-211ENST00000535883 ONECUT3O60422 494 aaPredicted RBP13.69□□□□□ -0.22
LRTOMT-211ENST00000535883 PRAG1Q86YV5 1406 aa13.69□□□□□ -0.22
LRTOMT-211ENST00000535883 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
LRTOMT-211ENST00000535883 SPHKAPQ2M3C7 1700 aa13.68□□□□□ -0.22
LRTOMT-211ENST00000535883 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
LRTOMT-211ENST00000535883 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
LRTOMT-211ENST00000535883 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
LRTOMT-211ENST00000535883 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
LRTOMT-211ENST00000535883 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
LRTOMT-211ENST00000535883 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
LRTOMT-211ENST00000535883 ITGAEP38570 1179 aa13.64□□□□□ -0.23
LRTOMT-211ENST00000535883 VPS72Q15906 364 aa13.64□□□□□ -0.23
LRTOMT-211ENST00000535883 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
LRTOMT-211ENST00000535883 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
LRTOMT-211ENST00000535883 KRT27Q7Z3Y8 459 aa13.63□□□□□ -0.23
LRTOMT-211ENST00000535883 UTRNP46939 3433 aa13.63□□□□□ -0.23
LRTOMT-211ENST00000535883 NAIPQ13075 1403 aa13.62□□□□□ -0.23
LRTOMT-211ENST00000535883 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
LRTOMT-211ENST00000535883 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
LRTOMT-211ENST00000535883 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
LRTOMT-211ENST00000535883 R3HDM1Q15032 1099 aaKnown RBP13.61□□□□□ -0.23
LRTOMT-211ENST00000535883 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
LRTOMT-211ENST00000535883 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
LRTOMT-211ENST00000535883 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
LRTOMT-211ENST00000535883 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
LRTOMT-211ENST00000535883 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
LRTOMT-211ENST00000535883 STK26Q9P289 416 aa13.59□□□□□ -0.23
LRTOMT-211ENST00000535883 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.24
LRTOMT-211ENST00000535883 BAG6P46379 1132 aa13.57□□□□□ -0.24
LRTOMT-211ENST00000535883 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
LRTOMT-211ENST00000535883 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
LRTOMT-211ENST00000535883 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
LRTOMT-211ENST00000535883 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
LRTOMT-211ENST00000535883 KIF1BO60333 1816 aa13.55□□□□□ -0.24
LRTOMT-211ENST00000535883 PLCH1Q4KWH8 1693 aa13.55□□□□□ -0.24
LRTOMT-211ENST00000535883 TECPR2O15040 1411 aa13.55□□□□□ -0.24
LRTOMT-211ENST00000535883 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
LRTOMT-211ENST00000535883 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
LRTOMT-211ENST00000535883 TNS3Q68CZ2 1445 aa13.54□□□□□ -0.24
LRTOMT-211ENST00000535883 PPLO60437 1756 aa13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
LRTOMT-211ENST00000535883 YY1P25490 414 aa13.52□□□□□ -0.25
LRTOMT-211ENST00000535883 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
LRTOMT-211ENST00000535883 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
LRTOMT-211ENST00000535883 ABCA3Q99758 1704 aa13.52□□□□□ -0.25
LRTOMT-211ENST00000535883 NRAPQ86VF7 1730 aa13.51□□□□□ -0.25
LRTOMT-211ENST00000535883 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
LRTOMT-211ENST00000535883 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
LRTOMT-211ENST00000535883 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
LRTOMT-211ENST00000535883 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 SPATA31A5Q5VU36 1347 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 SPATA31A7Q8IWB4 1347 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 A0A0G2JS52 829 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 MYT1Q01538 1121 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
LRTOMT-211ENST00000535883 TRIM37O94972 964 aa13.48□□□□□ -0.25
LRTOMT-211ENST00000535883 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
LRTOMT-211ENST00000535883 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
LRTOMT-211ENST00000535883 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 RGL3Q3MIN7 710 aa13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 SPATA31E1Q6ZUB1 1445 aa13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
LRTOMT-211ENST00000535883 PSME1Q06323 249 aa13.46□□□□□ -0.25
LRTOMT-211ENST00000535883 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
LRTOMT-211ENST00000535883 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.26
LRTOMT-211ENST00000535883 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
LRTOMT-211ENST00000535883 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
LRTOMT-211ENST00000535883 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
LRTOMT-211ENST00000535883 PIK3C2GO75747 1445 aa13.43□□□□□ -0.26
LRTOMT-211ENST00000535883 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
LRTOMT-211ENST00000535883 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
LRTOMT-211ENST00000535883 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
LRTOMT-211ENST00000535883 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
LRTOMT-211ENST00000535883 PRR36Q9H6K5 1346 aa13.42□□□□□ -0.26
LRTOMT-211ENST00000535883 APBA3O96018 575 aa13.42□□□□□ -0.26
LRTOMT-211ENST00000535883 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
LRTOMT-211ENST00000535883 SPATA31A1Q5TZJ5 1347 aa13.41□□□□□ -0.26
LRTOMT-211ENST00000535883 CFAP70Q5T0N1 1121 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms