RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 HSPA5P11021 654 aaKnown RBP21.93■■□□□ 1.1
CNN1-202ENST00000535659 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
CNN1-202ENST00000535659 TMEM94Q12767 1356 aa21.9■■□□□ 1.1
CNN1-202ENST00000535659 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.1
CNN1-202ENST00000535659 C14orf37Q86TY3 774 aa21.89■■□□□ 1.09
CNN1-202ENST00000535659 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.09
CNN1-202ENST00000535659 MINK1Q8N4C8 1332 aaPredicted RBP21.87■■□□□ 1.09
CNN1-202ENST00000535659 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
CNN1-202ENST00000535659 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
CNN1-202ENST00000535659 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
CNN1-202ENST00000535659 TESK2Q96S53 571 aa21.86■■□□□ 1.09
CNN1-202ENST00000535659 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
CNN1-202ENST00000535659 QRICH2Q9H0J4 1663 aa21.85■■□□□ 1.09
CNN1-202ENST00000535659 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.84■■□□□ 1.09
CNN1-202ENST00000535659 SBNO2Q9Y2G9 1366 aa21.82■■□□□ 1.08
CNN1-202ENST00000535659 XIRP1Q702N8 1843 aaKnown RBP21.82■■□□□ 1.08
CNN1-202ENST00000535659 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
CNN1-202ENST00000535659 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
CNN1-202ENST00000535659 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
CNN1-202ENST00000535659 MSH6P52701 1360 aa21.8■■□□□ 1.08
CNN1-202ENST00000535659 TMF1P82094 1093 aa21.8■■□□□ 1.08
CNN1-202ENST00000535659 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
CNN1-202ENST00000535659 EVC2Q86UK5 1308 aa21.79■■□□□ 1.08
CNN1-202ENST00000535659 ATF3P18847 181 aa21.79■■□□□ 1.08
CNN1-202ENST00000535659 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
CNN1-202ENST00000535659 CADPS2Q86UW7 1296 aa21.77■■□□□ 1.08
CNN1-202ENST00000535659 SRPK2P78362 688 aaKnown RBP21.75■■□□□ 1.07
CNN1-202ENST00000535659 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
CNN1-202ENST00000535659 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
CNN1-202ENST00000535659 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
CNN1-202ENST00000535659 CDCA8Q53HL2 280 aa21.74■■□□□ 1.07
CNN1-202ENST00000535659 PUS7Q96PZ0 661 aaKnown RBP21.74■■□□□ 1.07
CNN1-202ENST00000535659 DCCP43146 1447 aa21.73■■□□□ 1.07
CNN1-202ENST00000535659 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
CNN1-202ENST00000535659 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
CNN1-202ENST00000535659 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.07
CNN1-202ENST00000535659 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.07
CNN1-202ENST00000535659 SLAIN2Q9P270 581 aa21.7■■□□□ 1.06
CNN1-202ENST00000535659 FMN2Q9NZ56 1722 aa21.69■■□□□ 1.06
CNN1-202ENST00000535659 PRR36Q9H6K5 1346 aa21.67■■□□□ 1.06
CNN1-202ENST00000535659 TOM1O60784 492 aa21.67■■□□□ 1.06
CNN1-202ENST00000535659 CCDC61Q9Y6R9 512 aa21.67■■□□□ 1.06
CNN1-202ENST00000535659 POLR3GLQ9BT43 218 aa21.66■■□□□ 1.06
CNN1-202ENST00000535659 KIF7Q2M1P5 1343 aa21.65■■□□□ 1.06
CNN1-202ENST00000535659 MST1RQ04912 1400 aa21.65■■□□□ 1.06
CNN1-202ENST00000535659 ANKARQ7Z5J8 1434 aa21.65■■□□□ 1.06
CNN1-202ENST00000535659 ZNF316A6NFI3 1004 aaPredicted RBP21.65■■□□□ 1.06
CNN1-202ENST00000535659 ESCO1Q5FWF5 840 aa21.65■■□□□ 1.06
CNN1-202ENST00000535659 ATAD2Q6PL18 1390 aa21.65■■□□□ 1.06
CNN1-202ENST00000535659 ATP7BP35670 1465 aa21.64■■□□□ 1.05
CNN1-202ENST00000535659 C1orf167Q5SNV9 1468 aa21.64■■□□□ 1.05
CNN1-202ENST00000535659 USP32Q8NFA0 1604 aa21.63■■□□□ 1.05
CNN1-202ENST00000535659 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
CNN1-202ENST00000535659 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
CNN1-202ENST00000535659 WASHC2AQ641Q2 1341 aa21.63■■□□□ 1.05
CNN1-202ENST00000535659 TMC1Q8TDI8 760 aa21.62■■□□□ 1.05
CNN1-202ENST00000535659 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
CNN1-202ENST00000535659 PLEKHG3A1L390 1219 aa21.61■■□□□ 1.05
CNN1-202ENST00000535659 SLC12A5Q9H2X9 1139 aa21.6■■□□□ 1.05
CNN1-202ENST00000535659 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
CNN1-202ENST00000535659 PMFBP1Q8TBY8 1022 aa21.59■■□□□ 1.05
CNN1-202ENST00000535659 RGPD8O14715 1765 aaPredicted RBP21.58■■□□□ 1.05
CNN1-202ENST00000535659 PPIP5K1Q6PFW1 1433 aa21.58■■□□□ 1.05
CNN1-202ENST00000535659 BRINP3Q76B58 766 aa21.58■■□□□ 1.04
CNN1-202ENST00000535659 TOPAZ1Q8N9V7 1692 aa21.57■■□□□ 1.04
CNN1-202ENST00000535659 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
CNN1-202ENST00000535659 NGDNQ8NEJ9 315 aaKnown RBP21.56■■□□□ 1.04
CNN1-202ENST00000535659 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
CNN1-202ENST00000535659 NINLQ9Y2I6 1382 aa21.56■■□□□ 1.04
CNN1-202ENST00000535659 ACEP12821 1306 aa21.54■■□□□ 1.04
CNN1-202ENST00000535659 FOXO3O43524 673 aa21.54■■□□□ 1.04
CNN1-202ENST00000535659 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
CNN1-202ENST00000535659 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
CNN1-202ENST00000535659 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
CNN1-202ENST00000535659 HDGFL2Q7Z4V5 671 aaPredicted RBP21.52■■□□□ 1.04
CNN1-202ENST00000535659 MYOM1P52179 1685 aa21.52■■□□□ 1.04
CNN1-202ENST00000535659 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
CNN1-202ENST00000535659 PSME1Q06323 249 aa21.51■■□□□ 1.03
CNN1-202ENST00000535659 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
CNN1-202ENST00000535659 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
CNN1-202ENST00000535659 HSPA1LP34931 641 aa21.5■■□□□ 1.03
CNN1-202ENST00000535659 PANK3Q9H999 370 aa21.5■■□□□ 1.03
CNN1-202ENST00000535659 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
CNN1-202ENST00000535659 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
CNN1-202ENST00000535659 CPSF1Q10570 1443 aaKnown RBP21.48■■□□□ 1.03
CNN1-202ENST00000535659 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
CNN1-202ENST00000535659 KRT28Q7Z3Y7 464 aa21.48■■□□□ 1.03
CNN1-202ENST00000535659 ANKRD36BQ8N2N9 1353 aa21.47■■□□□ 1.03
CNN1-202ENST00000535659 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
CNN1-202ENST00000535659 MED1Q15648 1581 aaPredicted RBP21.46■■□□□ 1.03
CNN1-202ENST00000535659 A0A1W2PP64 1363 aa21.46■■□□□ 1.03
CNN1-202ENST00000535659 KTN1Q86UP2 1357 aaKnown RBP21.46■■□□□ 1.03
CNN1-202ENST00000535659 XPCQ01831 940 aaPredicted RBP21.45■■□□□ 1.02
CNN1-202ENST00000535659 CARD14Q9BXL6 1004 aa21.45■■□□□ 1.02
CNN1-202ENST00000535659 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
CNN1-202ENST00000535659 NHSL1Q5SYE7 1610 aa21.42■■□□□ 1.02
CNN1-202ENST00000535659 SOS2Q07890 1332 aaPredicted RBP21.42■■□□□ 1.02
CNN1-202ENST00000535659 USP6P35125 1406 aa21.42■■□□□ 1.02
CNN1-202ENST00000535659 BRD4O60885 1362 aaPredicted RBP21.41■■□□□ 1.02
CNN1-202ENST00000535659 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms