RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
CLPB-205ENST00000535477 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
CLPB-205ENST00000535477 RIMS1Q86UR5 1692 aaKnown RBP25.37■■□□□ 1.65
CLPB-205ENST00000535477 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
CLPB-205ENST00000535477 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
CLPB-205ENST00000535477 THEMISQ8N1K5 641 aaPredicted RBP25.36■■□□□ 1.65
CLPB-205ENST00000535477 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
CLPB-205ENST00000535477 PPP2R1AP30153 589 aa25.35■■□□□ 1.65
CLPB-205ENST00000535477 NPC1L1Q9UHC9 1359 aa25.34■■□□□ 1.65
CLPB-205ENST00000535477 CDK19Q9BWU1 502 aa25.34■■□□□ 1.65
CLPB-205ENST00000535477 NSD3Q9BZ95 1437 aa25.33■■□□□ 1.65
CLPB-205ENST00000535477 DLC1Q96QB1 1528 aa25.33■■□□□ 1.65
CLPB-205ENST00000535477 PLEKHG1Q9ULL1 1385 aa25.33■■□□□ 1.64
CLPB-205ENST00000535477 SLC26A8Q96RN1 970 aa25.32■■□□□ 1.64
CLPB-205ENST00000535477 ADAMTS13Q76LX8 1427 aa25.31■■□□□ 1.64
CLPB-205ENST00000535477 ZBED9Q6R2W3 1325 aa25.31■■□□□ 1.64
CLPB-205ENST00000535477 SLIT1O75093 1534 aa25.28■■□□□ 1.64
CLPB-205ENST00000535477 ARHGAP23Q9P227 1491 aa25.28■■□□□ 1.64
CLPB-205ENST00000535477 ATAD2Q6PL18 1390 aa25.27■■□□□ 1.64
CLPB-205ENST00000535477 ANKRD36BQ8N2N9 1353 aa25.27■■□□□ 1.64
CLPB-205ENST00000535477 ADAMTSL3P82987 1691 aa25.26■■□□□ 1.63
CLPB-205ENST00000535477 CGNL1Q0VF96 1302 aa25.23■■□□□ 1.63
CLPB-205ENST00000535477 NINLQ9Y2I6 1382 aa25.23■■□□□ 1.63
CLPB-205ENST00000535477 CEP170BQ9Y4F5 1589 aaPredicted RBP25.23■■□□□ 1.63
CLPB-205ENST00000535477 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
CLPB-205ENST00000535477 A0A1W2PP64 1363 aa25.23■■□□□ 1.63
CLPB-205ENST00000535477 TNNT2P45379 298 aaPredicted RBP25.22■■□□□ 1.63
CLPB-205ENST00000535477 CABP1Q9NZU7 370 aa25.22■■□□□ 1.63
CLPB-205ENST00000535477 TECPR2O15040 1411 aa25.22■■□□□ 1.63
CLPB-205ENST00000535477 SIRT1Q96EB6 747 aa25.22■■□□□ 1.63
CLPB-205ENST00000535477 FAM135BQ49AJ0 1406 aa25.22■■□□□ 1.63
CLPB-205ENST00000535477 TERF2IPQ9NYB0 399 aa25.21■■□□□ 1.63
CLPB-205ENST00000535477 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
CLPB-205ENST00000535477 WASLO00401 505 aaPredicted RBP25.2■■□□□ 1.63
CLPB-205ENST00000535477 KNDC1Q76NI1 1749 aa25.2■■□□□ 1.62
CLPB-205ENST00000535477 MED14O60244 1454 aa25.2■■□□□ 1.62
CLPB-205ENST00000535477 CPS1P31327 1500 aa25.19■■□□□ 1.62
CLPB-205ENST00000535477 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
CLPB-205ENST00000535477 SALL2Q9Y467 1007 aaPredicted RBP25.17■■□□□ 1.62
CLPB-205ENST00000535477 PTPRUQ92729 1446 aa25.17■■□□□ 1.62
CLPB-205ENST00000535477 WDR43Q15061 677 aaKnown RBP eCLIP25.17■■□□□ 1.62
CLPB-205ENST00000535477 HDGFL2Q7Z4V5 671 aaPredicted RBP25.17■■□□□ 1.62
CLPB-205ENST00000535477 ADAMTS8Q9UP79 889 aa25.17■■□□□ 1.62
CLPB-205ENST00000535477 AMOTL2Q9Y2J4 779 aa25.17■■□□□ 1.62
CLPB-205ENST00000535477 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
CLPB-205ENST00000535477 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
CLPB-205ENST00000535477 NUDT16Q96DE0 195 aaKnown RBP25.12■■□□□ 1.61
CLPB-205ENST00000535477 ANKLE2Q86XL3 938 aa25.12■■□□□ 1.61
CLPB-205ENST00000535477 SUPT16HQ9Y5B9 1047 aaKnown RBP25.12■■□□□ 1.61
CLPB-205ENST00000535477 NCKAP5LQ9HCH0 1330 aa25.11■■□□□ 1.61
CLPB-205ENST00000535477 GGNBP2Q9H3C7 697 aa25.11■■□□□ 1.61
CLPB-205ENST00000535477 NSD2O96028 1365 aa25.1■■□□□ 1.61
CLPB-205ENST00000535477 FKBP8Q14318 412 aa25.1■■□□□ 1.61
CLPB-205ENST00000535477 PPIP5K1Q6PFW1 1433 aa25.09■■□□□ 1.61
CLPB-205ENST00000535477 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
CLPB-205ENST00000535477 FYB1O15117 783 aa25.08■■□□□ 1.61
CLPB-205ENST00000535477 NEFLP07196 543 aa25.08■■□□□ 1.61
CLPB-205ENST00000535477 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
CLPB-205ENST00000535477 DIP2AQ14689 1571 aa25.07■■□□□ 1.6
CLPB-205ENST00000535477 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
CLPB-205ENST00000535477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.07■■□□□ 1.6
CLPB-205ENST00000535477 CCDC61Q9Y6R9 512 aa25.07■■□□□ 1.6
CLPB-205ENST00000535477 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.07■■□□□ 1.6
CLPB-205ENST00000535477 MTHFSP49914 203 aa25.06■■□□□ 1.6
CLPB-205ENST00000535477 INSRP06213 1382 aa25.05■■□□□ 1.6
CLPB-205ENST00000535477 ATP7BP35670 1465 aa25.05■■□□□ 1.6
CLPB-205ENST00000535477 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
CLPB-205ENST00000535477 PRR36Q9H6K5 1346 aa25.04■■□□□ 1.6
CLPB-205ENST00000535477 POLR3AO14802 1390 aaPredicted RBP25.03■■□□□ 1.6
CLPB-205ENST00000535477 KCNA6P17658 529 aa25.02■■□□□ 1.6
CLPB-205ENST00000535477 NUDCQ9Y266 331 aa25.02■■□□□ 1.6
CLPB-205ENST00000535477 SMG6Q86US8 1419 aaKnown RBP25.01■■□□□ 1.59
CLPB-205ENST00000535477 CCDC146Q8IYE0 955 aa25.01■■□□□ 1.59
CLPB-205ENST00000535477 PTCH1Q13635 1447 aa25■■□□□ 1.59
CLPB-205ENST00000535477 CPSF1Q10570 1443 aaKnown RBP24.99■■□□□ 1.59
CLPB-205ENST00000535477 ADGRB2O60241 1585 aa24.99■■□□□ 1.59
CLPB-205ENST00000535477 CFAP53Q96M91 514 aa24.98■■□□□ 1.59
CLPB-205ENST00000535477 PIK3R4Q99570 1358 aa24.96■■□□□ 1.59
CLPB-205ENST00000535477 IRX6P78412 446 aaPredicted RBP24.96■■□□□ 1.59
CLPB-205ENST00000535477 XRN1Q8IZH2 1706 aaKnown RBP24.96■■□□□ 1.59
CLPB-205ENST00000535477 CDC42BPGQ6DT37 1551 aa24.94■■□□□ 1.58
CLPB-205ENST00000535477 EDC4Q6P2E9 1401 aaKnown RBP24.94■■□□□ 1.58
CLPB-205ENST00000535477 NME9Q86XW9 330 aa24.93■■□□□ 1.58
CLPB-205ENST00000535477 CDCA7LQ96GN5 454 aa24.93■■□□□ 1.58
CLPB-205ENST00000535477 KIF20BQ96Q89 1820 aa24.93■■□□□ 1.58
CLPB-205ENST00000535477 ZNF692Q9BU19 519 aaPredicted RBP24.93■■□□□ 1.58
CLPB-205ENST00000535477 ANKRD26Q9UPS8 1709 aa24.93■■□□□ 1.58
CLPB-205ENST00000535477 PDE3BQ13370 1112 aa24.92■■□□□ 1.58
CLPB-205ENST00000535477 ACEP12821 1306 aa24.92■■□□□ 1.58
CLPB-205ENST00000535477 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
CLPB-205ENST00000535477 APAF1O14727 1248 aa24.91■■□□□ 1.58
CLPB-205ENST00000535477 FBLN1P23142 703 aa24.91■■□□□ 1.58
CLPB-205ENST00000535477 RBM33Q96EV2 1170 aaKnown RBP24.91■■□□□ 1.58
CLPB-205ENST00000535477 ZRANB1Q9UGI0 708 aa24.91■■□□□ 1.58
CLPB-205ENST00000535477 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
CLPB-205ENST00000535477 PLEKHG3A1L390 1219 aa24.89■■□□□ 1.57
CLPB-205ENST00000535477 PMFBP1Q8TBY8 1022 aa24.89■■□□□ 1.57
CLPB-205ENST00000535477 ITSN1Q15811 1721 aa24.88■■□□□ 1.57
CLPB-205ENST00000535477 PPM1GO15355 546 aaPredicted RBP24.86■■□□□ 1.57
CLPB-205ENST00000535477 CHD2O14647 1828 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms