RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 SAFB2Q14151 953 aaKnown RBP eCLIP18.17■□□□□ 0.5
NEK4-207ENST00000535191 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
NEK4-207ENST00000535191 QRICH2Q9H0J4 1663 aa18.17■□□□□ 0.5
NEK4-207ENST00000535191 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
NEK4-207ENST00000535191 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
NEK4-207ENST00000535191 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
NEK4-207ENST00000535191 PREX1Q8TCU6 1659 aa18.14■□□□□ 0.5
NEK4-207ENST00000535191 E9PSI1 815 aa18.13■□□□□ 0.49
NEK4-207ENST00000535191 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.13■□□□□ 0.49
NEK4-207ENST00000535191 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
NEK4-207ENST00000535191 MTHFSP49914 203 aa18.13■□□□□ 0.49
NEK4-207ENST00000535191 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
NEK4-207ENST00000535191 TSPOAP1O95153 1857 aa18.12■□□□□ 0.49
NEK4-207ENST00000535191 ANKRD36BQ8N2N9 1353 aa18.12■□□□□ 0.49
NEK4-207ENST00000535191 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
NEK4-207ENST00000535191 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
NEK4-207ENST00000535191 REREQ9P2R6 1566 aa18.11■□□□□ 0.49
NEK4-207ENST00000535191 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
NEK4-207ENST00000535191 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 POGKQ9P215 609 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 PRAM1Q96QH2 718 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 TMEM131LA2VDJ0 1609 aa18.1■□□□□ 0.49
NEK4-207ENST00000535191 AGLP35573 1532 aa18.09■□□□□ 0.49
NEK4-207ENST00000535191 ERICH6Q7L0X2 663 aa18.09■□□□□ 0.49
NEK4-207ENST00000535191 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
NEK4-207ENST00000535191 MINK1Q8N4C8 1332 aaPredicted RBP18.08■□□□□ 0.48
NEK4-207ENST00000535191 NSD2O96028 1365 aa18.08■□□□□ 0.48
NEK4-207ENST00000535191 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
NEK4-207ENST00000535191 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
NEK4-207ENST00000535191 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
NEK4-207ENST00000535191 NEUROD2Q15784 382 aa18.06■□□□□ 0.48
NEK4-207ENST00000535191 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
NEK4-207ENST00000535191 NINLQ9Y2I6 1382 aa18.06■□□□□ 0.48
NEK4-207ENST00000535191 MS4A1P11836 297 aa18.06■□□□□ 0.48
NEK4-207ENST00000535191 BCAR3O75815 825 aa18.05■□□□□ 0.48
NEK4-207ENST00000535191 MLECQ14165 292 aa18.05■□□□□ 0.48
NEK4-207ENST00000535191 RRP7AQ9Y3A4 280 aaKnown RBP18.05■□□□□ 0.48
NEK4-207ENST00000535191 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
NEK4-207ENST00000535191 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
NEK4-207ENST00000535191 PTPRMP28827 1452 aa18.03■□□□□ 0.48
NEK4-207ENST00000535191 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
NEK4-207ENST00000535191 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
NEK4-207ENST00000535191 PDE4AP27815 886 aa18.03■□□□□ 0.48
NEK4-207ENST00000535191 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
NEK4-207ENST00000535191 CDK19Q9BWU1 502 aa18.03■□□□□ 0.48
NEK4-207ENST00000535191 GGNBP2Q9H3C7 697 aa18.02■□□□□ 0.48
NEK4-207ENST00000535191 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
NEK4-207ENST00000535191 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
NEK4-207ENST00000535191 U2AF1L5P0DN76 240 aaPredicted RBP18.01■□□□□ 0.47
NEK4-207ENST00000535191 U2AF1Q01081 240 aaKnown RBP eCLIP18.01■□□□□ 0.47
NEK4-207ENST00000535191 WDR63Q8IWG1 891 aa18.01■□□□□ 0.47
NEK4-207ENST00000535191 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
NEK4-207ENST00000535191 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
NEK4-207ENST00000535191 FYB1O15117 783 aa18■□□□□ 0.47
NEK4-207ENST00000535191 CENPQQ7L2Z9 268 aaPredicted RBP18■□□□□ 0.47
NEK4-207ENST00000535191 ALKQ9UM73 1620 aa18■□□□□ 0.47
NEK4-207ENST00000535191 BACH2Q9BYV9 841 aa17.99■□□□□ 0.47
NEK4-207ENST00000535191 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
NEK4-207ENST00000535191 CCDC27Q2M243 656 aa17.99■□□□□ 0.47
NEK4-207ENST00000535191 HDGFL2Q7Z4V5 671 aaPredicted RBP17.99■□□□□ 0.47
NEK4-207ENST00000535191 IPO9Q96P70 1041 aaKnown RBP17.98■□□□□ 0.47
NEK4-207ENST00000535191 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
NEK4-207ENST00000535191 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
NEK4-207ENST00000535191 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
NEK4-207ENST00000535191 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
NEK4-207ENST00000535191 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
NEK4-207ENST00000535191 A2ML1A8K2U0 1454 aa17.97■□□□□ 0.47
NEK4-207ENST00000535191 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
NEK4-207ENST00000535191 RIMS2Q9UQ26 1411 aa17.96■□□□□ 0.47
NEK4-207ENST00000535191 ARHGEF40Q8TER5 1519 aa17.96■□□□□ 0.47
NEK4-207ENST00000535191 PDE3AQ14432 1141 aa17.96■□□□□ 0.47
NEK4-207ENST00000535191 ESF1Q9H501 851 aaKnown RBP17.96■□□□□ 0.47
NEK4-207ENST00000535191 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
NEK4-207ENST00000535191 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
NEK4-207ENST00000535191 CD163L1Q9NR16 1453 aa17.94■□□□□ 0.46
NEK4-207ENST00000535191 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
NEK4-207ENST00000535191 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
NEK4-207ENST00000535191 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
NEK4-207ENST00000535191 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
NEK4-207ENST00000535191 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
NEK4-207ENST00000535191 ZMYM3Q14202 1370 aa17.92■□□□□ 0.46
NEK4-207ENST00000535191 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
NEK4-207ENST00000535191 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
NEK4-207ENST00000535191 ZBTB47Q9UFB7 747 aaPredicted RBP17.92■□□□□ 0.46
NEK4-207ENST00000535191 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
NEK4-207ENST00000535191 PLEKHF1Q96S99 279 aa17.91■□□□□ 0.46
NEK4-207ENST00000535191 MED14O60244 1454 aa17.91■□□□□ 0.46
NEK4-207ENST00000535191 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
NEK4-207ENST00000535191 HDGFP51858 240 aaKnown RBP17.89■□□□□ 0.45
NEK4-207ENST00000535191 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
NEK4-207ENST00000535191 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.89■□□□□ 0.45
NEK4-207ENST00000535191 COG6Q9Y2V7 657 aa17.89■□□□□ 0.45
NEK4-207ENST00000535191 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
NEK4-207ENST00000535191 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
NEK4-207ENST00000535191 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
NEK4-207ENST00000535191 TXNDC2Q86VQ3 553 aa17.87■□□□□ 0.45
NEK4-207ENST00000535191 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms