RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
VAMP1-204ENST00000535180 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
VAMP1-204ENST00000535180 SLIT2O94813 1529 aa16.95■□□□□ 0.3
VAMP1-204ENST00000535180 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
VAMP1-204ENST00000535180 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
VAMP1-204ENST00000535180 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
VAMP1-204ENST00000535180 ONECUT3O60422 494 aaPredicted RBP16.91■□□□□ 0.3
VAMP1-204ENST00000535180 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
VAMP1-204ENST00000535180 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
VAMP1-204ENST00000535180 PXDNQ92626 1479 aa16.9■□□□□ 0.3
VAMP1-204ENST00000535180 NPHP3Q7Z494 1330 aa16.89■□□□□ 0.29
VAMP1-204ENST00000535180 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
VAMP1-204ENST00000535180 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
VAMP1-204ENST00000535180 ADGRL2O95490 1459 aa16.87■□□□□ 0.29
VAMP1-204ENST00000535180 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
VAMP1-204ENST00000535180 VPS72Q15906 364 aa16.86■□□□□ 0.29
VAMP1-204ENST00000535180 USP32Q8NFA0 1604 aa16.85■□□□□ 0.29
VAMP1-204ENST00000535180 PLCH1Q4KWH8 1693 aa16.85■□□□□ 0.29
VAMP1-204ENST00000535180 TNS1Q9HBL0 1735 aaKnown RBP16.84■□□□□ 0.29
VAMP1-204ENST00000535180 VPS8Q8N3P4 1428 aa16.83■□□□□ 0.28
VAMP1-204ENST00000535180 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
VAMP1-204ENST00000535180 DISP2A7MBM2 1401 aa16.81■□□□□ 0.28
VAMP1-204ENST00000535180 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
VAMP1-204ENST00000535180 FOXO3O43524 673 aa16.81■□□□□ 0.28
VAMP1-204ENST00000535180 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
VAMP1-204ENST00000535180 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
VAMP1-204ENST00000535180 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
VAMP1-204ENST00000535180 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
VAMP1-204ENST00000535180 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
VAMP1-204ENST00000535180 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
VAMP1-204ENST00000535180 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.28
VAMP1-204ENST00000535180 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
VAMP1-204ENST00000535180 NEXMIFQ5QGS0 1516 aa16.76■□□□□ 0.27
VAMP1-204ENST00000535180 SPATA31A3Q5VYP0 1347 aa16.76■□□□□ 0.27
VAMP1-204ENST00000535180 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
VAMP1-204ENST00000535180 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
VAMP1-204ENST00000535180 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
VAMP1-204ENST00000535180 A0A0G2JS52 829 aa16.75■□□□□ 0.27
VAMP1-204ENST00000535180 MYT1Q01538 1121 aa16.75■□□□□ 0.27
VAMP1-204ENST00000535180 CHD4Q14839 1912 aa16.74■□□□□ 0.27
VAMP1-204ENST00000535180 ZNF784Q8NCA9 323 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-204ENST00000535180 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
VAMP1-204ENST00000535180 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
VAMP1-204ENST00000535180 ABCA3Q99758 1704 aa16.73■□□□□ 0.27
VAMP1-204ENST00000535180 NRAPQ86VF7 1730 aa16.73■□□□□ 0.27
VAMP1-204ENST00000535180 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
VAMP1-204ENST00000535180 RREB1Q92766 1687 aa16.72■□□□□ 0.27
VAMP1-204ENST00000535180 FAM98CQ17RN3 349 aaKnown RBP16.72■□□□□ 0.27
VAMP1-204ENST00000535180 KIF1BO60333 1816 aa16.72■□□□□ 0.27
VAMP1-204ENST00000535180 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
VAMP1-204ENST00000535180 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-204ENST00000535180 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
VAMP1-204ENST00000535180 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-204ENST00000535180 KIF1AQ12756 1690 aa16.71■□□□□ 0.27
VAMP1-204ENST00000535180 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
VAMP1-204ENST00000535180 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
VAMP1-204ENST00000535180 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
VAMP1-204ENST00000535180 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
VAMP1-204ENST00000535180 CABLES1Q8TDN4 633 aa16.68■□□□□ 0.26
VAMP1-204ENST00000535180 THSD7AQ9UPZ6 1657 aa16.67■□□□□ 0.26
VAMP1-204ENST00000535180 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
VAMP1-204ENST00000535180 NUP155O75694 1391 aa16.66■□□□□ 0.26
VAMP1-204ENST00000535180 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
VAMP1-204ENST00000535180 KCNQ2O43526 872 aa16.66■□□□□ 0.26
VAMP1-204ENST00000535180 KRT28Q7Z3Y7 464 aa16.66■□□□□ 0.26
VAMP1-204ENST00000535180 FMN2Q9NZ56 1722 aa16.65■□□□□ 0.26
VAMP1-204ENST00000535180 NAIPQ13075 1403 aa16.65■□□□□ 0.26
VAMP1-204ENST00000535180 TNS3Q68CZ2 1445 aa16.65■□□□□ 0.26
VAMP1-204ENST00000535180 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
VAMP1-204ENST00000535180 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
VAMP1-204ENST00000535180 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
VAMP1-204ENST00000535180 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
VAMP1-204ENST00000535180 UTRNP46939 3433 aa16.64■□□□□ 0.25
VAMP1-204ENST00000535180 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
VAMP1-204ENST00000535180 TRIM37O94972 964 aa16.63■□□□□ 0.25
VAMP1-204ENST00000535180 APBA3O96018 575 aa16.63■□□□□ 0.25
VAMP1-204ENST00000535180 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
VAMP1-204ENST00000535180 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
VAMP1-204ENST00000535180 FAM196AQ6ZSG2 479 aa16.62■□□□□ 0.25
VAMP1-204ENST00000535180 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
VAMP1-204ENST00000535180 PSME1Q06323 249 aa16.61■□□□□ 0.25
VAMP1-204ENST00000535180 BTG4Q9NY30 223 aa16.61■□□□□ 0.25
VAMP1-204ENST00000535180 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
VAMP1-204ENST00000535180 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
VAMP1-204ENST00000535180 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
VAMP1-204ENST00000535180 PPLO60437 1756 aa16.59■□□□□ 0.25
VAMP1-204ENST00000535180 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
VAMP1-204ENST00000535180 APLP2Q06481 763 aa16.58■□□□□ 0.24
VAMP1-204ENST00000535180 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
VAMP1-204ENST00000535180 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
VAMP1-204ENST00000535180 ROCK1Q13464 1354 aa16.56■□□□□ 0.24
VAMP1-204ENST00000535180 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
VAMP1-204ENST00000535180 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
VAMP1-204ENST00000535180 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
VAMP1-204ENST00000535180 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
VAMP1-204ENST00000535180 TECPR2O15040 1411 aa16.54■□□□□ 0.24
VAMP1-204ENST00000535180 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
VAMP1-204ENST00000535180 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
VAMP1-204ENST00000535180 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
VAMP1-204ENST00000535180 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms