RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 SLAIN2Q9P270 581 aa7.57□□□□□ -1.2
NPIPB3-206ENST00000534903 ZFYVE9O95405 1425 aa7.57□□□□□ -1.2
NPIPB3-206ENST00000534903 SETD1AO15047 1707 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-206ENST00000534903 KDM5AP29375 1690 aaKnown RBP7.57□□□□□ -1.2
NPIPB3-206ENST00000534903 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
NPIPB3-206ENST00000534903 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
NPIPB3-206ENST00000534903 C11orf95C9JLR9 678 aaPredicted RBP7.56□□□□□ -1.2
NPIPB3-206ENST00000534903 MEX3CQ5U5Q3 659 aaKnown RBP7.56□□□□□ -1.2
NPIPB3-206ENST00000534903 SLIT1O75093 1534 aa7.56□□□□□ -1.2
NPIPB3-206ENST00000534903 ADGRB1O14514 1584 aa7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 MYO5BQ9ULV0 1848 aa7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 PROSER2Q86WR7 435 aaPredicted RBP7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 MSH6P52701 1360 aa7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
NPIPB3-206ENST00000534903 ROBO1Q9Y6N7 1651 aa7.54□□□□□ -1.2
NPIPB3-206ENST00000534903 SLC24A1O60721 1099 aa7.54□□□□□ -1.2
NPIPB3-206ENST00000534903 SAMD1Q6SPF0 538 aaPredicted RBP7.54□□□□□ -1.2
NPIPB3-206ENST00000534903 ZRANB1Q9UGI0 708 aa7.54□□□□□ -1.2
NPIPB3-206ENST00000534903 ADGRF5Q8IZF2 1346 aa7.53□□□□□ -1.2
NPIPB3-206ENST00000534903 TESK2Q96S53 571 aa7.53□□□□□ -1.2
NPIPB3-206ENST00000534903 TMEM2Q9UHN6 1383 aa7.53□□□□□ -1.2
NPIPB3-206ENST00000534903 LRP6O75581 1613 aa7.52□□□□□ -1.2
NPIPB3-206ENST00000534903 ARHGEF28Q8N1W1 1705 aaKnown RBP7.52□□□□□ -1.2
NPIPB3-206ENST00000534903 MYOM1P52179 1685 aa7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 QRICH2Q9H0J4 1663 aa7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 NKTRP30414 1462 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 KTN1Q86UP2 1357 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 VGFO15240 615 aaPredicted RBP7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 CHGAP10645 457 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 TMF1P82094 1093 aa7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 IDI1Q13907 227 aa7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 XIRP1Q702N8 1843 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 NCOA3Q9Y6Q9 1424 aa7.52□□□□□ -1.21
NPIPB3-206ENST00000534903 RBM6P78332 1123 aaKnown RBP7.51□□□□□ -1.21
NPIPB3-206ENST00000534903 POLA2Q14181 598 aa7.51□□□□□ -1.21
NPIPB3-206ENST00000534903 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
NPIPB3-206ENST00000534903 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
NPIPB3-206ENST00000534903 ASXL1Q8IXJ9 1541 aa7.51□□□□□ -1.21
NPIPB3-206ENST00000534903 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
NPIPB3-206ENST00000534903 YTHDC1Q96MU7 727 aaKnown RBP7.5□□□□□ -1.21
NPIPB3-206ENST00000534903 PRKRIP1Q9H875 184 aaPredicted RBP7.5□□□□□ -1.21
NPIPB3-206ENST00000534903 C14orf93Q9H972 538 aaKnown RBP7.5□□□□□ -1.21
NPIPB3-206ENST00000534903 UBR1Q8IWV7 1749 aa7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 COL16A1Q07092 1604 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 CCDC125Q86Z20 511 aa7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 RBM33Q96EV2 1170 aaKnown RBP7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 AFF2P51816 1311 aa7.49□□□□□ -1.21
NPIPB3-206ENST00000534903 ATAD2Q6PL18 1390 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 DLC1Q96QB1 1528 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 RGS12O14924 1447 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 CADPS2Q86UW7 1296 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 AKT1S1Q96B36 256 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 NGLY1Q96IV0 654 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 SLC26A8Q96RN1 970 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 QTRT2Q9H974 415 aaKnown RBP7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 STAG3Q9UJ98 1225 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 CENPJQ9HC77 1338 aaPredicted RBP7.48□□□□□ -1.21
NPIPB3-206ENST00000534903 KNDC1Q76NI1 1749 aa7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NWD1Q149M9 1564 aa7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NUTM2BA6NNL0 878 aaPredicted RBP7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NUTM2EB1AL46 878 aaPredicted RBP7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NUTM2DQ5VT03 806 aaPredicted RBP7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 NRXN3Q9Y4C0 1643 aa7.47□□□□□ -1.21
NPIPB3-206ENST00000534903 AHDC1Q5TGY3 1603 aaPredicted RBP7.46□□□□□ -1.21
NPIPB3-206ENST00000534903 RALBP1Q15311 655 aa7.46□□□□□ -1.22
NPIPB3-206ENST00000534903 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.46□□□□□ -1.22
NPIPB3-206ENST00000534903 C19orf44Q9H6X5 657 aa7.46□□□□□ -1.22
NPIPB3-206ENST00000534903 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.22
NPIPB3-206ENST00000534903 USP32Q8NFA0 1604 aa7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 YTHDC2Q9H6S0 1430 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 HAX1O00165 279 aa7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 LRRC59Q96AG4 307 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 TULP4Q9NRJ4 1543 aa7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 MYBBP1AQ9BQG0 1328 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 BRD4O60885 1362 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 NPC1L1Q9UHC9 1359 aa7.45□□□□□ -1.22
NPIPB3-206ENST00000534903 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 ATF3P18847 181 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 BRINP3Q76B58 766 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 TBX22Q9Y458 520 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 DIP2AQ14689 1571 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
NPIPB3-206ENST00000534903 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 EVX2Q03828 476 aa7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 REM2Q8IYK8 340 aaPredicted RBP7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 LRPPRCP42704 1394 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 PLEKHG1Q9ULL1 1385 aa7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 TECPR2O15040 1411 aa7.43□□□□□ -1.22
NPIPB3-206ENST00000534903 C14orf37Q86TY3 774 aa7.42□□□□□ -1.22
NPIPB3-206ENST00000534903 BCANQ96GW7 911 aa7.42□□□□□ -1.22
NPIPB3-206ENST00000534903 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
NPIPB3-206ENST00000534903 PANK3Q9H999 370 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms