RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 ARHGEF28Q8N1W1 1705 aaKnown RBP21.88■■□□□ 1.09
PDZD3-214ENST00000534790 DIP2CQ9Y2E4 1556 aa21.88■■□□□ 1.09
PDZD3-214ENST00000534790 NSD3Q9BZ95 1437 aa21.87■■□□□ 1.09
PDZD3-214ENST00000534790 VGFO15240 615 aaPredicted RBP21.87■■□□□ 1.09
PDZD3-214ENST00000534790 NEXMIFQ5QGS0 1516 aa21.87■■□□□ 1.09
PDZD3-214ENST00000534790 DDRGK1Q96HY6 314 aa21.87■■□□□ 1.09
PDZD3-214ENST00000534790 APAF1O14727 1248 aa21.85■■□□□ 1.09
PDZD3-214ENST00000534790 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
PDZD3-214ENST00000534790 SIGLEC1Q9BZZ2 1709 aa21.85■■□□□ 1.09
PDZD3-214ENST00000534790 CHGAP10645 457 aaKnown RBP21.84■■□□□ 1.09
PDZD3-214ENST00000534790 CFAP65Q6ZU64 1925 aaKnown RBP21.84■■□□□ 1.09
PDZD3-214ENST00000534790 AAMPQ13685 434 aa21.84■■□□□ 1.09
PDZD3-214ENST00000534790 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
PDZD3-214ENST00000534790 EVC2Q86UK5 1308 aa21.84■■□□□ 1.09
PDZD3-214ENST00000534790 MORC1Q86VD1 984 aa21.83■■□□□ 1.09
PDZD3-214ENST00000534790 GGT6Q6P531 493 aa21.83■■□□□ 1.09
PDZD3-214ENST00000534790 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
PDZD3-214ENST00000534790 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
PDZD3-214ENST00000534790 CFAP53Q96M91 514 aa21.81■■□□□ 1.08
PDZD3-214ENST00000534790 TRAK1Q9UPV9 953 aa21.81■■□□□ 1.08
PDZD3-214ENST00000534790 C20orf194Q5TEA3 1177 aa21.8■■□□□ 1.08
PDZD3-214ENST00000534790 CCDC146Q8IYE0 955 aa21.8■■□□□ 1.08
PDZD3-214ENST00000534790 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
PDZD3-214ENST00000534790 SLC52A1Q9NWF4 448 aa21.8■■□□□ 1.08
PDZD3-214ENST00000534790 IQSEC2Q5JU85 1478 aa21.8■■□□□ 1.08
PDZD3-214ENST00000534790 CCDC27Q2M243 656 aa21.78■■□□□ 1.08
PDZD3-214ENST00000534790 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
PDZD3-214ENST00000534790 TULP4Q9NRJ4 1543 aa21.77■■□□□ 1.07
PDZD3-214ENST00000534790 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
PDZD3-214ENST00000534790 IL27Q8NEV9 243 aa21.75■■□□□ 1.07
PDZD3-214ENST00000534790 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
PDZD3-214ENST00000534790 SKAP1Q86WV1 359 aa21.74■■□□□ 1.07
PDZD3-214ENST00000534790 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
PDZD3-214ENST00000534790 CLTCQ00610 1675 aaKnown RBP21.74■■□□□ 1.07
PDZD3-214ENST00000534790 ANKRD26Q9UPS8 1709 aa21.73■■□□□ 1.07
PDZD3-214ENST00000534790 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
PDZD3-214ENST00000534790 SLC12A5Q9H2X9 1139 aa21.73■■□□□ 1.07
PDZD3-214ENST00000534790 MED14O60244 1454 aa21.72■■□□□ 1.07
PDZD3-214ENST00000534790 REREQ9P2R6 1566 aa21.72■■□□□ 1.07
PDZD3-214ENST00000534790 TMEM131LA2VDJ0 1609 aa21.71■■□□□ 1.07
PDZD3-214ENST00000534790 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
PDZD3-214ENST00000534790 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
PDZD3-214ENST00000534790 ADGRB2O60241 1585 aa21.7■■□□□ 1.06
PDZD3-214ENST00000534790 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
PDZD3-214ENST00000534790 ATAD2Q6PL18 1390 aa21.7■■□□□ 1.06
PDZD3-214ENST00000534790 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
PDZD3-214ENST00000534790 TMEM132EQ6IEE7 984 aa21.69■■□□□ 1.06
PDZD3-214ENST00000534790 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
PDZD3-214ENST00000534790 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
PDZD3-214ENST00000534790 CT47B1P0C2W7 299 aaPredicted RBP21.68■■□□□ 1.06
PDZD3-214ENST00000534790 RAPGEF3O95398 923 aa21.67■■□□□ 1.06
PDZD3-214ENST00000534790 MYH16Q9H6N6 1097 aa21.66■■□□□ 1.06
PDZD3-214ENST00000534790 MAPK8IP3Q9UPT6 1336 aa21.66■■□□□ 1.06
PDZD3-214ENST00000534790 MYO5BQ9ULV0 1848 aa21.65■■□□□ 1.06
PDZD3-214ENST00000534790 BCAR3O75815 825 aa21.65■■□□□ 1.06
PDZD3-214ENST00000534790 MTHFSP49914 203 aa21.65■■□□□ 1.06
PDZD3-214ENST00000534790 TCP11L2Q8N4U5 519 aa21.65■■□□□ 1.06
PDZD3-214ENST00000534790 AGLP35573 1532 aa21.65■■□□□ 1.06
PDZD3-214ENST00000534790 GSE1Q14687 1217 aa21.64■■□□□ 1.06
PDZD3-214ENST00000534790 NFKBIBQ15653 356 aa21.64■■□□□ 1.06
PDZD3-214ENST00000534790 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
PDZD3-214ENST00000534790 IDI1Q13907 227 aa21.64■■□□□ 1.05
PDZD3-214ENST00000534790 RTN4Q9NQC3 1192 aaKnown RBP21.64■■□□□ 1.05
PDZD3-214ENST00000534790 PTPRMP28827 1452 aa21.63■■□□□ 1.05
PDZD3-214ENST00000534790 CLUAP1Q96AJ1 413 aa21.63■■□□□ 1.05
PDZD3-214ENST00000534790 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
PDZD3-214ENST00000534790 TERF2IPQ9NYB0 399 aa21.62■■□□□ 1.05
PDZD3-214ENST00000534790 ANO8Q9HCE9 1232 aaPredicted RBP21.61■■□□□ 1.05
PDZD3-214ENST00000534790 YEATS2Q9ULM3 1422 aa21.61■■□□□ 1.05
PDZD3-214ENST00000534790 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
PDZD3-214ENST00000534790 RARSP54136 660 aaKnown RBP21.61■■□□□ 1.05
PDZD3-214ENST00000534790 C8orf34Q49A92 452 aa21.61■■□□□ 1.05
PDZD3-214ENST00000534790 PNNQ9H307 717 aaKnown RBP21.6■■□□□ 1.05
PDZD3-214ENST00000534790 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
PDZD3-214ENST00000534790 DLC1Q96QB1 1528 aa21.59■■□□□ 1.05
PDZD3-214ENST00000534790 YTHDC2Q9H6S0 1430 aaKnown RBP21.59■■□□□ 1.05
PDZD3-214ENST00000534790 A0A1W2PP64 1363 aa21.58■■□□□ 1.05
PDZD3-214ENST00000534790 KIF20BQ96Q89 1820 aa21.57■■□□□ 1.04
PDZD3-214ENST00000534790 DIP2BQ9P265 1576 aa21.57■■□□□ 1.04
PDZD3-214ENST00000534790 ALKQ9UM73 1620 aa21.56■■□□□ 1.04
PDZD3-214ENST00000534790 IL16Q14005 1332 aa21.56■■□□□ 1.04
PDZD3-214ENST00000534790 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
PDZD3-214ENST00000534790 TNNT2P45379 298 aaPredicted RBP21.56■■□□□ 1.04
PDZD3-214ENST00000534790 U2AF1L5P0DN76 240 aaPredicted RBP21.54■■□□□ 1.04
PDZD3-214ENST00000534790 U2AF1Q01081 240 aaKnown RBP eCLIP21.54■■□□□ 1.04
PDZD3-214ENST00000534790 CABP2Q9NPB3 220 aa21.54■■□□□ 1.04
PDZD3-214ENST00000534790 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
PDZD3-214ENST00000534790 RGS3P49796 1198 aa21.53■■□□□ 1.04
PDZD3-214ENST00000534790 CDC42BPGQ6DT37 1551 aa21.53■■□□□ 1.04
PDZD3-214ENST00000534790 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
PDZD3-214ENST00000534790 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
PDZD3-214ENST00000534790 FRAT1Q92837 279 aaPredicted RBP21.51■■□□□ 1.03
PDZD3-214ENST00000534790 COG6Q9Y2V7 657 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 ATP7BP35670 1465 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 CD163L1Q9NR16 1453 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 POGKQ9P215 609 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 BRPF3Q9ULD4 1205 aa21.51■■□□□ 1.03
PDZD3-214ENST00000534790 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
PDZD3-214ENST00000534790 SPATA31D1Q6ZQQ2 1576 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms