RNA–Protein interactions for RNA: ENST00000534685.5

CHEK1-217, Transcript of checkpoint kinase 1, humanhuman

TSL 5

Gene CHEK1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-217ENST00000534685 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
CHEK1-217ENST00000534685 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
CHEK1-217ENST00000534685 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
CHEK1-217ENST00000534685 LRP6O75581 1613 aa13.68□□□□□ -0.22
CHEK1-217ENST00000534685 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
CHEK1-217ENST00000534685 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
CHEK1-217ENST00000534685 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
CHEK1-217ENST00000534685 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
CHEK1-217ENST00000534685 ZNF772Q68DY9 489 aaPredicted RBP13.67□□□□□ -0.22
CHEK1-217ENST00000534685 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
CHEK1-217ENST00000534685 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
CHEK1-217ENST00000534685 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
CHEK1-217ENST00000534685 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
CHEK1-217ENST00000534685 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
CHEK1-217ENST00000534685 POTEMA6NI47 508 aa13.66□□□□□ -0.22
CHEK1-217ENST00000534685 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
CHEK1-217ENST00000534685 SETD1AO15047 1707 aaKnown RBP13.65□□□□□ -0.22
CHEK1-217ENST00000534685 ITGAEP38570 1179 aa13.65□□□□□ -0.22
CHEK1-217ENST00000534685 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
CHEK1-217ENST00000534685 NUP155O75694 1391 aa13.65□□□□□ -0.22
CHEK1-217ENST00000534685 PIK3R4Q99570 1358 aa13.65□□□□□ -0.22
CHEK1-217ENST00000534685 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
CHEK1-217ENST00000534685 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
CHEK1-217ENST00000534685 UNC13BO14795 1591 aa13.63□□□□□ -0.23
CHEK1-217ENST00000534685 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
CHEK1-217ENST00000534685 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.23
CHEK1-217ENST00000534685 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
CHEK1-217ENST00000534685 ROCK1Q13464 1354 aa13.62□□□□□ -0.23
CHEK1-217ENST00000534685 RXRBP28702 533 aa13.62□□□□□ -0.23
CHEK1-217ENST00000534685 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
CHEK1-217ENST00000534685 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
CHEK1-217ENST00000534685 AHDC1Q5TGY3 1603 aaPredicted RBP13.61□□□□□ -0.23
CHEK1-217ENST00000534685 TRPM2O94759 1503 aa13.61□□□□□ -0.23
CHEK1-217ENST00000534685 C7P10643 843 aa13.61□□□□□ -0.23
CHEK1-217ENST00000534685 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
CHEK1-217ENST00000534685 E9PCH4 1651 aa13.6□□□□□ -0.23
CHEK1-217ENST00000534685 PROM2Q8N271 834 aa13.6□□□□□ -0.23
CHEK1-217ENST00000534685 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.6□□□□□ -0.23
CHEK1-217ENST00000534685 AFF2P51816 1311 aa13.6□□□□□ -0.23
CHEK1-217ENST00000534685 PPARGC1BQ86YN6 1023 aaKnown RBP13.58□□□□□ -0.24
CHEK1-217ENST00000534685 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
CHEK1-217ENST00000534685 DDX17Q92841 729 aaKnown RBP13.58□□□□□ -0.24
CHEK1-217ENST00000534685 METP08581 1390 aa13.58□□□□□ -0.24
CHEK1-217ENST00000534685 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
CHEK1-217ENST00000534685 DCCP43146 1447 aa13.57□□□□□ -0.24
CHEK1-217ENST00000534685 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
CHEK1-217ENST00000534685 MST1RQ04912 1400 aa13.56□□□□□ -0.24
CHEK1-217ENST00000534685 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
CHEK1-217ENST00000534685 C8orf37Q96NL8 207 aa13.56□□□□□ -0.24
CHEK1-217ENST00000534685 CCDC61Q9Y6R9 512 aa13.55□□□□□ -0.24
CHEK1-217ENST00000534685 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
CHEK1-217ENST00000534685 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
CHEK1-217ENST00000534685 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
CHEK1-217ENST00000534685 QTRT2Q9H974 415 aaKnown RBP13.53□□□□□ -0.24
CHEK1-217ENST00000534685 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
CHEK1-217ENST00000534685 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
CHEK1-217ENST00000534685 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
CHEK1-217ENST00000534685 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
CHEK1-217ENST00000534685 NRXN3Q9Y4C0 1643 aa13.52□□□□□ -0.25
CHEK1-217ENST00000534685 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.25
CHEK1-217ENST00000534685 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
CHEK1-217ENST00000534685 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
CHEK1-217ENST00000534685 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
CHEK1-217ENST00000534685 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
CHEK1-217ENST00000534685 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
CHEK1-217ENST00000534685 NGLY1Q96IV0 654 aa13.5□□□□□ -0.25
CHEK1-217ENST00000534685 RGS12O14924 1447 aa13.49□□□□□ -0.25
CHEK1-217ENST00000534685 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
CHEK1-217ENST00000534685 C1orf167Q5SNV9 1468 aa13.48□□□□□ -0.25
CHEK1-217ENST00000534685 ORAI2Q96SN7 254 aa13.48□□□□□ -0.25
CHEK1-217ENST00000534685 PCDH10Q9P2E7 1040 aa13.48□□□□□ -0.25
CHEK1-217ENST00000534685 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
CHEK1-217ENST00000534685 NEXMIFQ5QGS0 1516 aa13.46□□□□□ -0.25
CHEK1-217ENST00000534685 MAMSTRQ6ZN01 415 aa13.46□□□□□ -0.25
CHEK1-217ENST00000534685 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.26
CHEK1-217ENST00000534685 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
CHEK1-217ENST00000534685 USP21Q9UK80 565 aa13.45□□□□□ -0.26
CHEK1-217ENST00000534685 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
CHEK1-217ENST00000534685 CLTCL1P53675 1640 aa13.45□□□□□ -0.26
CHEK1-217ENST00000534685 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
CHEK1-217ENST00000534685 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
CHEK1-217ENST00000534685 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
CHEK1-217ENST00000534685 BMP2KQ9NSY1 1161 aaPredicted RBP13.43□□□□□ -0.26
CHEK1-217ENST00000534685 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
CHEK1-217ENST00000534685 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
CHEK1-217ENST00000534685 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
CHEK1-217ENST00000534685 NAIPQ13075 1403 aa13.4□□□□□ -0.26
CHEK1-217ENST00000534685 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
CHEK1-217ENST00000534685 ESCO1Q5FWF5 840 aa13.4□□□□□ -0.26
CHEK1-217ENST00000534685 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
CHEK1-217ENST00000534685 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
CHEK1-217ENST00000534685 HFM1A2PYH4 1435 aa13.39□□□□□ -0.27
CHEK1-217ENST00000534685 NUTM2FA1L443 756 aa13.38□□□□□ -0.27
CHEK1-217ENST00000534685 STK26Q9P289 416 aa13.38□□□□□ -0.27
CHEK1-217ENST00000534685 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
CHEK1-217ENST00000534685 MAP3K13O43283 966 aa13.37□□□□□ -0.27
CHEK1-217ENST00000534685 FOXO3O43524 673 aa13.37□□□□□ -0.27
CHEK1-217ENST00000534685 ATRNO75882 1429 aa13.37□□□□□ -0.27
CHEK1-217ENST00000534685 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
CHEK1-217ENST00000534685 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms