RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
LMO1-204ENST00000534484 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
LMO1-204ENST00000534484 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
LMO1-204ENST00000534484 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
LMO1-204ENST00000534484 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
LMO1-204ENST00000534484 PPP2R1AP30153 589 aa18.21■□□□□ 0.51
LMO1-204ENST00000534484 PRAM1Q96QH2 718 aa18.21■□□□□ 0.51
LMO1-204ENST00000534484 STK26Q9P289 416 aa18.21■□□□□ 0.51
LMO1-204ENST00000534484 METP08581 1390 aa18.2■□□□□ 0.5
LMO1-204ENST00000534484 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
LMO1-204ENST00000534484 CEBPAP49715 358 aaPredicted RBP18.2■□□□□ 0.5
LMO1-204ENST00000534484 CNGB1Q14028 1251 aaPredicted RBP18.2■□□□□ 0.5
LMO1-204ENST00000534484 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
LMO1-204ENST00000534484 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
LMO1-204ENST00000534484 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
LMO1-204ENST00000534484 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
LMO1-204ENST00000534484 NSD2O96028 1365 aa18.18■□□□□ 0.5
LMO1-204ENST00000534484 POGKQ9P215 609 aa18.18■□□□□ 0.5
LMO1-204ENST00000534484 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
LMO1-204ENST00000534484 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
LMO1-204ENST00000534484 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
LMO1-204ENST00000534484 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
LMO1-204ENST00000534484 LTKP29376 864 aa18.16■□□□□ 0.5
LMO1-204ENST00000534484 SETD1BQ9UPS6 1966 aaKnown RBP18.15■□□□□ 0.5
LMO1-204ENST00000534484 THEMISQ8N1K5 641 aaPredicted RBP18.14■□□□□ 0.49
LMO1-204ENST00000534484 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
LMO1-204ENST00000534484 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
LMO1-204ENST00000534484 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
LMO1-204ENST00000534484 MINK1Q8N4C8 1332 aaPredicted RBP18.13■□□□□ 0.49
LMO1-204ENST00000534484 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
LMO1-204ENST00000534484 ATP7BP35670 1465 aa18.13■□□□□ 0.49
LMO1-204ENST00000534484 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
LMO1-204ENST00000534484 CDK19Q9BWU1 502 aa18.12■□□□□ 0.49
LMO1-204ENST00000534484 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
LMO1-204ENST00000534484 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
LMO1-204ENST00000534484 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
LMO1-204ENST00000534484 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
LMO1-204ENST00000534484 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
LMO1-204ENST00000534484 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
LMO1-204ENST00000534484 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
LMO1-204ENST00000534484 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
LMO1-204ENST00000534484 TERF2IPQ9NYB0 399 aa18.09■□□□□ 0.49
LMO1-204ENST00000534484 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
LMO1-204ENST00000534484 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
LMO1-204ENST00000534484 PTCH1Q13635 1447 aa18.08■□□□□ 0.49
LMO1-204ENST00000534484 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
LMO1-204ENST00000534484 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
LMO1-204ENST00000534484 PIK3R4Q99570 1358 aa18.07■□□□□ 0.48
LMO1-204ENST00000534484 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
LMO1-204ENST00000534484 WASLO00401 505 aaPredicted RBP18.07■□□□□ 0.48
LMO1-204ENST00000534484 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
LMO1-204ENST00000534484 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
LMO1-204ENST00000534484 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
LMO1-204ENST00000534484 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
LMO1-204ENST00000534484 CPSF1Q10570 1443 aaKnown RBP18.06■□□□□ 0.48
LMO1-204ENST00000534484 TOPAZ1Q8N9V7 1692 aa18.06■□□□□ 0.48
LMO1-204ENST00000534484 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
LMO1-204ENST00000534484 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
LMO1-204ENST00000534484 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
LMO1-204ENST00000534484 NUDCQ9Y266 331 aa18.04■□□□□ 0.48
LMO1-204ENST00000534484 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
LMO1-204ENST00000534484 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
LMO1-204ENST00000534484 ITSN1Q15811 1721 aa18.02■□□□□ 0.48
LMO1-204ENST00000534484 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
LMO1-204ENST00000534484 BCANQ96GW7 911 aa18.01■□□□□ 0.47
LMO1-204ENST00000534484 CHD2O14647 1828 aaKnown RBP18■□□□□ 0.47
LMO1-204ENST00000534484 NEFLP07196 543 aa18■□□□□ 0.47
LMO1-204ENST00000534484 CABP1Q9NZU7 370 aa18■□□□□ 0.47
LMO1-204ENST00000534484 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
LMO1-204ENST00000534484 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
LMO1-204ENST00000534484 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
LMO1-204ENST00000534484 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
LMO1-204ENST00000534484 FYB1O15117 783 aa17.98■□□□□ 0.47
LMO1-204ENST00000534484 NGEFQ8N5V2 710 aa17.98■□□□□ 0.47
LMO1-204ENST00000534484 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
LMO1-204ENST00000534484 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
LMO1-204ENST00000534484 AMOTL2Q9Y2J4 779 aa17.97■□□□□ 0.47
LMO1-204ENST00000534484 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
LMO1-204ENST00000534484 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
LMO1-204ENST00000534484 FKBP8Q14318 412 aa17.96■□□□□ 0.47
LMO1-204ENST00000534484 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
LMO1-204ENST00000534484 ANKLE2Q86XL3 938 aa17.95■□□□□ 0.46
LMO1-204ENST00000534484 ZNF521Q96K83 1311 aa17.95■□□□□ 0.46
LMO1-204ENST00000534484 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
LMO1-204ENST00000534484 PLEKHG3A1L390 1219 aa17.93■□□□□ 0.46
LMO1-204ENST00000534484 MTHFSP49914 203 aa17.93■□□□□ 0.46
LMO1-204ENST00000534484 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
LMO1-204ENST00000534484 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
LMO1-204ENST00000534484 PNPLA6Q8IY17 1366 aa17.92■□□□□ 0.46
LMO1-204ENST00000534484 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
LMO1-204ENST00000534484 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
LMO1-204ENST00000534484 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
LMO1-204ENST00000534484 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
LMO1-204ENST00000534484 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
LMO1-204ENST00000534484 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
LMO1-204ENST00000534484 AATKQ6ZMQ8 1374 aa17.89■□□□□ 0.45
LMO1-204ENST00000534484 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
LMO1-204ENST00000534484 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
LMO1-204ENST00000534484 NWD1Q149M9 1564 aa17.88■□□□□ 0.45
LMO1-204ENST00000534484 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms