RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 CERKQ8TCT0 537 aa28.03■■■□□ 2.08
DKK3-215ENST00000534479 SAFB2Q14151 953 aaKnown RBP eCLIP28.02■■■□□ 2.08
DKK3-215ENST00000534479 ADGRL3Q9HAR2 1447 aa28.01■■■□□ 2.08
DKK3-215ENST00000534479 CENPJQ9HC77 1338 aaPredicted RBP28■■■□□ 2.07
DKK3-215ENST00000534479 MSH6P52701 1360 aa27.99■■■□□ 2.07
DKK3-215ENST00000534479 USP47Q96K76 1375 aa27.99■■■□□ 2.07
DKK3-215ENST00000534479 ADGRB2O60241 1585 aa27.97■■■□□ 2.07
DKK3-215ENST00000534479 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
DKK3-215ENST00000534479 C19orf44Q9H6X5 657 aa27.95■■■□□ 2.06
DKK3-215ENST00000534479 MINK1Q8N4C8 1332 aaPredicted RBP27.94■■■□□ 2.06
DKK3-215ENST00000534479 FMN2Q9NZ56 1722 aa27.92■■■□□ 2.06
DKK3-215ENST00000534479 DCCP43146 1447 aa27.92■■■□□ 2.06
DKK3-215ENST00000534479 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
DKK3-215ENST00000534479 HIRIP3Q9BW71 556 aaPredicted RBP27.9■■■□□ 2.06
DKK3-215ENST00000534479 ATF3P18847 181 aa27.89■■■□□ 2.06
DKK3-215ENST00000534479 EIF4G2P78344 907 aaKnown RBP eCLIP27.89■■■□□ 2.06
DKK3-215ENST00000534479 SBNO2Q9Y2G9 1366 aa27.86■■■□□ 2.05
DKK3-215ENST00000534479 CADPS2Q86UW7 1296 aa27.86■■■□□ 2.05
DKK3-215ENST00000534479 RGPD8O14715 1765 aaPredicted RBP27.86■■■□□ 2.05
DKK3-215ENST00000534479 TULP4Q9NRJ4 1543 aa27.84■■■□□ 2.05
DKK3-215ENST00000534479 HSPA5P11021 654 aaKnown RBP27.84■■■□□ 2.05
DKK3-215ENST00000534479 WASLO00401 505 aaPredicted RBP27.83■■■□□ 2.05
DKK3-215ENST00000534479 UBAP1LF5GYI3 381 aa27.82■■■□□ 2.04
DKK3-215ENST00000534479 TOM1O60784 492 aa27.82■■■□□ 2.04
DKK3-215ENST00000534479 MST1RQ04912 1400 aa27.81■■■□□ 2.04
DKK3-215ENST00000534479 USP32Q8NFA0 1604 aa27.81■■■□□ 2.04
DKK3-215ENST00000534479 TESK2Q96S53 571 aa27.8■■■□□ 2.04
DKK3-215ENST00000534479 EVC2Q86UK5 1308 aa27.8■■■□□ 2.04
DKK3-215ENST00000534479 ITSN1Q15811 1721 aa27.8■■■□□ 2.04
DKK3-215ENST00000534479 CDK19Q9BWU1 502 aa27.79■■■□□ 2.04
DKK3-215ENST00000534479 NUTM2FA1L443 756 aa27.77■■■□□ 2.04
DKK3-215ENST00000534479 SLC24A1O60721 1099 aa27.77■■■□□ 2.04
DKK3-215ENST00000534479 C1orf167Q5SNV9 1468 aa27.76■■■□□ 2.04
DKK3-215ENST00000534479 SLAIN2Q9P270 581 aa27.76■■■□□ 2.03
DKK3-215ENST00000534479 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
DKK3-215ENST00000534479 SRPK2P78362 688 aaKnown RBP27.75■■■□□ 2.03
DKK3-215ENST00000534479 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
DKK3-215ENST00000534479 TOPAZ1Q8N9V7 1692 aa27.75■■■□□ 2.03
DKK3-215ENST00000534479 ATP7BP35670 1465 aa27.73■■■□□ 2.03
DKK3-215ENST00000534479 TMF1P82094 1093 aa27.73■■■□□ 2.03
DKK3-215ENST00000534479 CABP2Q9NPB3 220 aa27.72■■■□□ 2.03
DKK3-215ENST00000534479 KIF1AQ12756 1690 aa27.71■■■□□ 2.03
DKK3-215ENST00000534479 DISP3Q9P2K9 1392 aa27.71■■■□□ 2.03
DKK3-215ENST00000534479 PRR36Q9H6K5 1346 aa27.7■■■□□ 2.03
DKK3-215ENST00000534479 SCAF1Q9H7N4 1312 aaKnown RBP27.7■■■□□ 2.03
DKK3-215ENST00000534479 PIP4K2BP78356 416 aa27.7■■■□□ 2.02
DKK3-215ENST00000534479 NUDT16Q96DE0 195 aaKnown RBP27.7■■■□□ 2.02
DKK3-215ENST00000534479 ESCO1Q5FWF5 840 aa27.67■■■□□ 2.02
DKK3-215ENST00000534479 ORAI2Q96SN7 254 aa27.66■■■□□ 2.02
DKK3-215ENST00000534479 ATAD2Q6PL18 1390 aa27.65■■■□□ 2.02
DKK3-215ENST00000534479 CDCA8Q53HL2 280 aa27.65■■■□□ 2.02
DKK3-215ENST00000534479 BRINP3Q76B58 766 aa27.64■■■□□ 2.02
DKK3-215ENST00000534479 NHSL1Q5SYE7 1610 aa27.63■■■□□ 2.01
DKK3-215ENST00000534479 FBXO41Q8TF61 875 aa27.63■■■□□ 2.01
DKK3-215ENST00000534479 PUS7Q96PZ0 661 aaKnown RBP27.63■■■□□ 2.01
DKK3-215ENST00000534479 CCDC61Q9Y6R9 512 aa27.63■■■□□ 2.01
DKK3-215ENST00000534479 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
DKK3-215ENST00000534479 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
DKK3-215ENST00000534479 MYOM1P52179 1685 aa27.59■■■□□ 2.01
DKK3-215ENST00000534479 PHLPP1O60346 1717 aa27.59■■■□□ 2.01
DKK3-215ENST00000534479 PMFBP1Q8TBY8 1022 aa27.59■■■□□ 2.01
DKK3-215ENST00000534479 AKAP12Q02952 1782 aa27.58■■■□□ 2
DKK3-215ENST00000534479 AHDC1Q5TGY3 1603 aaPredicted RBP27.57■■■□□ 2
DKK3-215ENST00000534479 POLR3GLQ9BT43 218 aa27.57■■■□□ 2
DKK3-215ENST00000534479 C11orf95C9JLR9 678 aaPredicted RBP27.56■■■□□ 2
DKK3-215ENST00000534479 PLEKHG3A1L390 1219 aa27.55■■■□□ 2
DKK3-215ENST00000534479 TMC1Q8TDI8 760 aa27.55■■■□□ 2
DKK3-215ENST00000534479 CABP1Q9NZU7 370 aa27.55■■■□□ 2
DKK3-215ENST00000534479 NGDNQ8NEJ9 315 aaKnown RBP27.54■■■□□ 2
DKK3-215ENST00000534479 NINLQ9Y2I6 1382 aa27.52■■■□□ 2
DKK3-215ENST00000534479 NPHP3Q7Z494 1330 aa27.52■■■□□ 2
DKK3-215ENST00000534479 FOXO3O43524 673 aa27.52■■■□□ 2
DKK3-215ENST00000534479 POLR3AO14802 1390 aaPredicted RBP27.51■■□□□ 1.99
DKK3-215ENST00000534479 ACEP12821 1306 aa27.51■■□□□ 1.99
DKK3-215ENST00000534479 KIF7Q2M1P5 1343 aa27.51■■□□□ 1.99
DKK3-215ENST00000534479 DDX17Q92841 729 aaKnown RBP27.51■■□□□ 1.99
DKK3-215ENST00000534479 MON2Q7Z3U7 1717 aa27.5■■□□□ 1.99
DKK3-215ENST00000534479 SLC12A5Q9H2X9 1139 aa27.5■■□□□ 1.99
DKK3-215ENST00000534479 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
DKK3-215ENST00000534479 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
DKK3-215ENST00000534479 TRPM3Q9HCF6 1732 aaPredicted RBP27.48■■□□□ 1.99
DKK3-215ENST00000534479 PXDNQ92626 1479 aa27.48■■□□□ 1.99
DKK3-215ENST00000534479 PSME1Q06323 249 aa27.47■■□□□ 1.99
DKK3-215ENST00000534479 XPCQ01831 940 aaPredicted RBP27.46■■□□□ 1.99
DKK3-215ENST00000534479 CD163L1Q9NR16 1453 aa27.45■■□□□ 1.99
DKK3-215ENST00000534479 WASHC2AQ641Q2 1341 aa27.45■■□□□ 1.99
DKK3-215ENST00000534479 KRT28Q7Z3Y7 464 aa27.45■■□□□ 1.98
DKK3-215ENST00000534479 SOS2Q07890 1332 aaPredicted RBP27.44■■□□□ 1.98
DKK3-215ENST00000534479 CPSF1Q10570 1443 aaKnown RBP27.44■■□□□ 1.98
DKK3-215ENST00000534479 HDGFL2Q7Z4V5 671 aaPredicted RBP27.44■■□□□ 1.98
DKK3-215ENST00000534479 TERF2IPQ9NYB0 399 aa27.44■■□□□ 1.98
DKK3-215ENST00000534479 NRKQ7Z2Y5 1582 aa27.43■■□□□ 1.98
DKK3-215ENST00000534479 HSPA1LP34931 641 aa27.42■■□□□ 1.98
DKK3-215ENST00000534479 ZNF692Q9BU19 519 aaPredicted RBP27.42■■□□□ 1.98
DKK3-215ENST00000534479 A0A1W2PP64 1363 aa27.42■■□□□ 1.98
DKK3-215ENST00000534479 KTN1Q86UP2 1357 aaKnown RBP27.42■■□□□ 1.98
DKK3-215ENST00000534479 USP6P35125 1406 aa27.41■■□□□ 1.98
DKK3-215ENST00000534479 ANKRD36BQ8N2N9 1353 aa27.41■■□□□ 1.98
DKK3-215ENST00000534479 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
DKK3-215ENST00000534479 SBNO1A3KN83 1393 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms