RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
RPS3-219ENST00000534440 DIP2AQ14689 1571 aa14.04□□□□□ -0.16
RPS3-219ENST00000534440 FAM135BQ49AJ0 1406 aa14.03□□□□□ -0.16
RPS3-219ENST00000534440 MYOM1P52179 1685 aa14.02□□□□□ -0.16
RPS3-219ENST00000534440 TULP4Q9NRJ4 1543 aa14.02□□□□□ -0.16
RPS3-219ENST00000534440 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.17
RPS3-219ENST00000534440 KCNA6P17658 529 aa14.02□□□□□ -0.17
RPS3-219ENST00000534440 HDGFP51858 240 aaKnown RBP14.02□□□□□ -0.17
RPS3-219ENST00000534440 TECPR2O15040 1411 aa14.01□□□□□ -0.17
RPS3-219ENST00000534440 PTPRUQ92729 1446 aa14.01□□□□□ -0.17
RPS3-219ENST00000534440 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
RPS3-219ENST00000534440 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
RPS3-219ENST00000534440 STK26Q9P289 416 aa14.01□□□□□ -0.17
RPS3-219ENST00000534440 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
RPS3-219ENST00000534440 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
RPS3-219ENST00000534440 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
RPS3-219ENST00000534440 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
RPS3-219ENST00000534440 TMF1P82094 1093 aa13.98□□□□□ -0.17
RPS3-219ENST00000534440 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
RPS3-219ENST00000534440 MIER1Q8N108 512 aa13.97□□□□□ -0.17
RPS3-219ENST00000534440 RBM33Q96EV2 1170 aaKnown RBP13.97□□□□□ -0.17
RPS3-219ENST00000534440 BCANQ96GW7 911 aa13.97□□□□□ -0.17
RPS3-219ENST00000534440 ROBO2Q9HCK4 1378 aa13.96□□□□□ -0.17
RPS3-219ENST00000534440 PRAM1Q96QH2 718 aa13.96□□□□□ -0.17
RPS3-219ENST00000534440 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
RPS3-219ENST00000534440 PROSER2Q86WR7 435 aaPredicted RBP13.95□□□□□ -0.18
RPS3-219ENST00000534440 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
RPS3-219ENST00000534440 PTCH1Q13635 1447 aa13.94□□□□□ -0.18
RPS3-219ENST00000534440 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
RPS3-219ENST00000534440 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
RPS3-219ENST00000534440 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
RPS3-219ENST00000534440 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
RPS3-219ENST00000534440 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
RPS3-219ENST00000534440 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
RPS3-219ENST00000534440 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
RPS3-219ENST00000534440 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
RPS3-219ENST00000534440 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
RPS3-219ENST00000534440 SLAIN2Q9P270 581 aa13.91□□□□□ -0.18
RPS3-219ENST00000534440 XIRP1Q702N8 1843 aaKnown RBP13.91□□□□□ -0.18
RPS3-219ENST00000534440 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
RPS3-219ENST00000534440 NKTRP30414 1462 aaKnown RBP13.91□□□□□ -0.18
RPS3-219ENST00000534440 POGKQ9P215 609 aa13.9□□□□□ -0.18
RPS3-219ENST00000534440 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
RPS3-219ENST00000534440 MSH6P52701 1360 aa13.88□□□□□ -0.19
RPS3-219ENST00000534440 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
RPS3-219ENST00000534440 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
RPS3-219ENST00000534440 EVC2Q86UK5 1308 aa13.88□□□□□ -0.19
RPS3-219ENST00000534440 SLC24A1O60721 1099 aa13.87□□□□□ -0.19
RPS3-219ENST00000534440 NALCNQ8IZF0 1738 aa13.87□□□□□ -0.19
RPS3-219ENST00000534440 CABP2Q9NPB3 220 aa13.86□□□□□ -0.19
RPS3-219ENST00000534440 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
RPS3-219ENST00000534440 PANK3Q9H999 370 aa13.85□□□□□ -0.19
RPS3-219ENST00000534440 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
RPS3-219ENST00000534440 ROBO1Q9Y6N7 1651 aa13.85□□□□□ -0.19
RPS3-219ENST00000534440 JCADQ9P266 1359 aa13.84□□□□□ -0.19
RPS3-219ENST00000534440 PER1O15534 1290 aaPredicted RBP13.84□□□□□ -0.19
RPS3-219ENST00000534440 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
RPS3-219ENST00000534440 ATP7BP35670 1465 aa13.84□□□□□ -0.19
RPS3-219ENST00000534440 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
RPS3-219ENST00000534440 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
RPS3-219ENST00000534440 ANP32CO43423 234 aa13.83□□□□□ -0.2
RPS3-219ENST00000534440 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
RPS3-219ENST00000534440 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
RPS3-219ENST00000534440 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
RPS3-219ENST00000534440 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
RPS3-219ENST00000534440 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
RPS3-219ENST00000534440 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
RPS3-219ENST00000534440 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
RPS3-219ENST00000534440 PRKRIP1Q9H875 184 aaPredicted RBP13.81□□□□□ -0.2
RPS3-219ENST00000534440 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
RPS3-219ENST00000534440 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
RPS3-219ENST00000534440 CARD14Q9BXL6 1004 aa13.8□□□□□ -0.2
RPS3-219ENST00000534440 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
RPS3-219ENST00000534440 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
RPS3-219ENST00000534440 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
RPS3-219ENST00000534440 TMC1Q8TDI8 760 aa13.79□□□□□ -0.2
RPS3-219ENST00000534440 A0A1W2PP64 1363 aa13.79□□□□□ -0.2
RPS3-219ENST00000534440 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
RPS3-219ENST00000534440 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
RPS3-219ENST00000534440 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
RPS3-219ENST00000534440 SPATA31A6Q5VVP1 1343 aa13.78□□□□□ -0.2
RPS3-219ENST00000534440 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
RPS3-219ENST00000534440 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
RPS3-219ENST00000534440 LRP6O75581 1613 aa13.78□□□□□ -0.2
RPS3-219ENST00000534440 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
RPS3-219ENST00000534440 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
RPS3-219ENST00000534440 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
RPS3-219ENST00000534440 MON2Q7Z3U7 1717 aa13.76□□□□□ -0.21
RPS3-219ENST00000534440 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
RPS3-219ENST00000534440 BRINP3Q76B58 766 aa13.76□□□□□ -0.21
RPS3-219ENST00000534440 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
RPS3-219ENST00000534440 ITSN1Q15811 1721 aa13.76□□□□□ -0.21
RPS3-219ENST00000534440 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
RPS3-219ENST00000534440 ATF3P18847 181 aa13.75□□□□□ -0.21
RPS3-219ENST00000534440 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
RPS3-219ENST00000534440 CABP1Q9NZU7 370 aa13.75□□□□□ -0.21
RPS3-219ENST00000534440 NRKQ7Z2Y5 1582 aa13.75□□□□□ -0.21
RPS3-219ENST00000534440 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
RPS3-219ENST00000534440 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
RPS3-219ENST00000534440 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms