RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 PRAM1Q96QH2 718 aa34.52■■■■□ 3.12
SIPA1-210ENST00000534406 GPRASP1Q5JY77 1395 aa34.51■■■■□ 3.12
SIPA1-210ENST00000534406 CDC42BPGQ6DT37 1551 aa34.51■■■■□ 3.12
SIPA1-210ENST00000534406 ATF3P18847 181 aa34.49■■■■□ 3.11
SIPA1-210ENST00000534406 POGKQ9P215 609 aa34.49■■■■□ 3.11
SIPA1-210ENST00000534406 CADPS2Q86UW7 1296 aa34.48■■■■□ 3.11
SIPA1-210ENST00000534406 ADGRB2O60241 1585 aa34.45■■■■□ 3.1
SIPA1-210ENST00000534406 SAFB2Q14151 953 aaKnown RBP eCLIP34.44■■■■□ 3.1
SIPA1-210ENST00000534406 SCAF1Q9H7N4 1312 aaKnown RBP34.43■■■■□ 3.1
SIPA1-210ENST00000534406 PIP4K2BP78356 416 aa34.42■■■■□ 3.1
SIPA1-210ENST00000534406 MST1RQ04912 1400 aa34.4■■■■□ 3.1
SIPA1-210ENST00000534406 EIF3AQ14152 1382 aaKnown RBP34.4■■■■□ 3.1
SIPA1-210ENST00000534406 CARD11Q9BXL7 1154 aa34.4■■■■□ 3.1
SIPA1-210ENST00000534406 FMN2Q9NZ56 1722 aa34.38■■■■□ 3.09
SIPA1-210ENST00000534406 QRICH2Q9H0J4 1663 aa34.38■■■■□ 3.09
SIPA1-210ENST00000534406 SLAIN2Q9P270 581 aa34.38■■■■□ 3.09
SIPA1-210ENST00000534406 ROBO1Q9Y6N7 1651 aa34.38■■■■□ 3.09
SIPA1-210ENST00000534406 CENPJQ9HC77 1338 aaPredicted RBP34.36■■■■□ 3.09
SIPA1-210ENST00000534406 MINK1Q8N4C8 1332 aaPredicted RBP34.34■■■■□ 3.09
SIPA1-210ENST00000534406 ILDR1Q86SU0 546 aaPredicted RBP34.34■■■■□ 3.09
SIPA1-210ENST00000534406 C1orf167Q5SNV9 1468 aa34.31■■■■□ 3.08
SIPA1-210ENST00000534406 HIRIP3Q9BW71 556 aaPredicted RBP34.3■■■■□ 3.08
SIPA1-210ENST00000534406 TULP4Q9NRJ4 1543 aa34.24■■■■□ 3.07
SIPA1-210ENST00000534406 ANKARQ7Z5J8 1434 aa34.22■■■■□ 3.07
SIPA1-210ENST00000534406 BRINP3Q76B58 766 aa34.22■■■■□ 3.07
SIPA1-210ENST00000534406 WASLO00401 505 aaPredicted RBP34.21■■■■□ 3.07
SIPA1-210ENST00000534406 USP32Q8NFA0 1604 aa34.21■■■■□ 3.07
SIPA1-210ENST00000534406 NUTM2FA1L443 756 aa34.2■■■■□ 3.07
SIPA1-210ENST00000534406 USP47Q96K76 1375 aa34.2■■■■□ 3.07
SIPA1-210ENST00000534406 RGPD8O14715 1765 aaPredicted RBP34.19■■■■□ 3.06
SIPA1-210ENST00000534406 SBNO2Q9Y2G9 1366 aa34.19■■■■□ 3.06
SIPA1-210ENST00000534406 AHDC1Q5TGY3 1603 aaPredicted RBP34.19■■■■□ 3.06
SIPA1-210ENST00000534406 NHSL1Q5SYE7 1610 aa34.18■■■■□ 3.06
SIPA1-210ENST00000534406 KIF1AQ12756 1690 aa34.17■■■■□ 3.06
SIPA1-210ENST00000534406 PHLPP1O60346 1717 aa34.16■■■■□ 3.06
SIPA1-210ENST00000534406 ITSN1Q15811 1721 aa34.15■■■■□ 3.06
SIPA1-210ENST00000534406 ATP7BP35670 1465 aa34.14■■■■□ 3.06
SIPA1-210ENST00000534406 HSPA1LP34931 641 aa34.14■■■■□ 3.06
SIPA1-210ENST00000534406 ORAI2Q96SN7 254 aa34.14■■■■□ 3.06
SIPA1-210ENST00000534406 ESCO1Q5FWF5 840 aa34.13■■■■□ 3.05
SIPA1-210ENST00000534406 CDK19Q9BWU1 502 aa34.12■■■■□ 3.05
SIPA1-210ENST00000534406 EVC2Q86UK5 1308 aa34.1■■■■□ 3.05
SIPA1-210ENST00000534406 PRR36Q9H6K5 1346 aa34.1■■■■□ 3.05
SIPA1-210ENST00000534406 TOPAZ1Q8N9V7 1692 aa34.1■■■■□ 3.05
SIPA1-210ENST00000534406 COL16A1Q07092 1604 aaPredicted RBP34.09■■■■□ 3.05
SIPA1-210ENST00000534406 ST20-MTHFSA0A0A6YYL1 179 aa34.09■■■■□ 3.05
SIPA1-210ENST00000534406 SRPK2P78362 688 aaKnown RBP34.07■■■■□ 3.04
SIPA1-210ENST00000534406 PHF8Q9UPP1 1060 aa34.05■■■■□ 3.04
SIPA1-210ENST00000534406 NUDT16Q96DE0 195 aaKnown RBP34.04■■■■□ 3.04
SIPA1-210ENST00000534406 NPHP3Q7Z494 1330 aa34.03■■■■□ 3.04
SIPA1-210ENST00000534406 TESK2Q96S53 571 aa34.02■■■■□ 3.04
SIPA1-210ENST00000534406 CABP2Q9NPB3 220 aa34.02■■■■□ 3.04
SIPA1-210ENST00000534406 DDX17Q92841 729 aaKnown RBP34■■■■□ 3.03
SIPA1-210ENST00000534406 SLC24A1O60721 1099 aa33.98■■■■□ 3.03
SIPA1-210ENST00000534406 EIF4G2P78344 907 aaKnown RBP eCLIP33.98■■■■□ 3.03
SIPA1-210ENST00000534406 CCDC61Q9Y6R9 512 aa33.98■■■■□ 3.03
SIPA1-210ENST00000534406 PXDNQ92626 1479 aa33.97■■■■□ 3.03
SIPA1-210ENST00000534406 FOXO3O43524 673 aa33.97■■■■□ 3.03
SIPA1-210ENST00000534406 ATAD2Q6PL18 1390 aa33.97■■■■□ 3.03
SIPA1-210ENST00000534406 PMFBP1Q8TBY8 1022 aa33.96■■■■□ 3.03
SIPA1-210ENST00000534406 PPIP5K1Q6PFW1 1433 aa33.96■■■■□ 3.03
SIPA1-210ENST00000534406 SOS2Q07890 1332 aaPredicted RBP33.95■■■■□ 3.03
SIPA1-210ENST00000534406 HSPA5P11021 654 aaKnown RBP33.91■■■■□ 3.02
SIPA1-210ENST00000534406 SHPRHQ149N8 1683 aa33.9■■■■□ 3.02
SIPA1-210ENST00000534406 JCADQ9P266 1359 aa33.9■■■■□ 3.02
SIPA1-210ENST00000534406 DISP3Q9P2K9 1392 aa33.9■■■■□ 3.02
SIPA1-210ENST00000534406 TMF1P82094 1093 aa33.9■■■■□ 3.02
SIPA1-210ENST00000534406 XPCQ01831 940 aaPredicted RBP33.89■■■■□ 3.02
SIPA1-210ENST00000534406 NGDNQ8NEJ9 315 aaKnown RBP33.89■■■■□ 3.02
SIPA1-210ENST00000534406 POLR3AO14802 1390 aaPredicted RBP33.88■■■■□ 3.01
SIPA1-210ENST00000534406 PLEKHG3A1L390 1219 aa33.88■■■■□ 3.01
SIPA1-210ENST00000534406 LRRC59Q96AG4 307 aaKnown RBP33.87■■■■□ 3.01
SIPA1-210ENST00000534406 PUS7Q96PZ0 661 aaKnown RBP33.86■■■■□ 3.01
SIPA1-210ENST00000534406 TRPM3Q9HCF6 1732 aaPredicted RBP33.85■■■■□ 3.01
SIPA1-210ENST00000534406 PSME1Q06323 249 aa33.85■■■■□ 3.01
SIPA1-210ENST00000534406 KRT28Q7Z3Y7 464 aa33.85■■■■□ 3.01
SIPA1-210ENST00000534406 ACEP12821 1306 aa33.83■■■■□ 3.01
SIPA1-210ENST00000534406 CABP1Q9NZU7 370 aa33.83■■■■□ 3.01
SIPA1-210ENST00000534406 SBNO1A3KN83 1393 aa33.82■■■■□ 3
SIPA1-210ENST00000534406 TNS3Q68CZ2 1445 aa33.81■■■■□ 3
SIPA1-210ENST00000534406 CDCA8Q53HL2 280 aa33.81■■■■□ 3
SIPA1-210ENST00000534406 PNPLA6Q8IY17 1366 aa33.81■■■■□ 3
SIPA1-210ENST00000534406 AKAP12Q02952 1782 aa33.8■■■■□ 3
SIPA1-210ENST00000534406 NINLQ9Y2I6 1382 aa33.78■■■■□ 3
SIPA1-210ENST00000534406 COL22A1Q8NFW1 1626 aaPredicted RBP33.78■■■■□ 3
SIPA1-210ENST00000534406 SPATA31A3Q5VYP0 1347 aa33.78■■■■□ 3
SIPA1-210ENST00000534406 ZEB1P37275 1124 aaPredicted RBP33.77■■■■□ 3
SIPA1-210ENST00000534406 ALS2Q96Q42 1657 aa33.75■■■□□ 2.99
SIPA1-210ENST00000534406 USP6P35125 1406 aa33.74■■■□□ 2.99
SIPA1-210ENST00000534406 TMC1Q8TDI8 760 aa33.74■■■□□ 2.99
SIPA1-210ENST00000534406 SPATA31A6Q5VVP1 1343 aa33.74■■■□□ 2.99
SIPA1-210ENST00000534406 ARHGEF10O15013 1369 aa33.73■■■□□ 2.99
SIPA1-210ENST00000534406 MON2Q7Z3U7 1717 aa33.73■■■□□ 2.99
SIPA1-210ENST00000534406 CPSF1Q10570 1443 aaKnown RBP33.72■■■□□ 2.99
SIPA1-210ENST00000534406 MED1Q15648 1581 aaPredicted RBP33.72■■■□□ 2.99
SIPA1-210ENST00000534406 BRD4O60885 1362 aaPredicted RBP33.71■■■□□ 2.99
SIPA1-210ENST00000534406 MYOM1P52179 1685 aa33.71■■■□□ 2.99
SIPA1-210ENST00000534406 CD163L1Q9NR16 1453 aa33.7■■■□□ 2.99
SIPA1-210ENST00000534406 NRKQ7Z2Y5 1582 aa33.7■■■□□ 2.99
SIPA1-210ENST00000534406 PAK3O75914 559 aaPredicted RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms