RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 HRCP23327 699 aa24■■□□□ 1.43
CCDC180-213ENST00000534189 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
CCDC180-213ENST00000534189 ATRNO75882 1429 aa23.98■■□□□ 1.43
CCDC180-213ENST00000534189 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
CCDC180-213ENST00000534189 PPLO60437 1756 aa23.97■■□□□ 1.43
CCDC180-213ENST00000534189 ANKRD30BQ9BXX2 1392 aa23.97■■□□□ 1.43
CCDC180-213ENST00000534189 PTCH1Q13635 1447 aa23.93■■□□□ 1.42
CCDC180-213ENST00000534189 ADGRF5Q8IZF2 1346 aa23.93■■□□□ 1.42
CCDC180-213ENST00000534189 LAMC1P11047 1609 aa23.92■■□□□ 1.42
CCDC180-213ENST00000534189 SOS2Q07890 1332 aaPredicted RBP23.9■■□□□ 1.42
CCDC180-213ENST00000534189 ADGRL3Q9HAR2 1447 aa23.9■■□□□ 1.42
CCDC180-213ENST00000534189 LRP5O75197 1615 aa23.88■■□□□ 1.41
CCDC180-213ENST00000534189 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
CCDC180-213ENST00000534189 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
CCDC180-213ENST00000534189 BLMP54132 1417 aaPredicted RBP23.85■■□□□ 1.41
CCDC180-213ENST00000534189 ROBO2Q9HCK4 1378 aa23.85■■□□□ 1.41
CCDC180-213ENST00000534189 PRAG1Q86YV5 1406 aa23.84■■□□□ 1.41
CCDC180-213ENST00000534189 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
CCDC180-213ENST00000534189 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
CCDC180-213ENST00000534189 GJD4Q96KN9 370 aaPredicted RBP23.82■■□□□ 1.4
CCDC180-213ENST00000534189 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
CCDC180-213ENST00000534189 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
CCDC180-213ENST00000534189 STK26Q9P289 416 aa23.81■■□□□ 1.4
CCDC180-213ENST00000534189 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
CCDC180-213ENST00000534189 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
CCDC180-213ENST00000534189 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
CCDC180-213ENST00000534189 ORAI2Q96SN7 254 aa23.79■■□□□ 1.4
CCDC180-213ENST00000534189 C14orf93Q9H972 538 aaKnown RBP23.79■■□□□ 1.4
CCDC180-213ENST00000534189 MYOM2P54296 1465 aa23.79■■□□□ 1.4
CCDC180-213ENST00000534189 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
CCDC180-213ENST00000534189 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
CCDC180-213ENST00000534189 TECPR2O15040 1411 aa23.75■■□□□ 1.39
CCDC180-213ENST00000534189 NRXN1Q9ULB1 1477 aa23.75■■□□□ 1.39
CCDC180-213ENST00000534189 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
CCDC180-213ENST00000534189 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
CCDC180-213ENST00000534189 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
CCDC180-213ENST00000534189 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
CCDC180-213ENST00000534189 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
CCDC180-213ENST00000534189 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CCDC180-213ENST00000534189 KDM2AQ9Y2K7 1162 aa23.71■■□□□ 1.39
CCDC180-213ENST00000534189 GLI3P10071 1580 aa23.7■■□□□ 1.38
CCDC180-213ENST00000534189 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.7■■□□□ 1.38
CCDC180-213ENST00000534189 MARF1Q9Y4F3 1742 aaKnown RBP23.7■■□□□ 1.38
CCDC180-213ENST00000534189 RALGAPBQ86X10 1494 aa23.69■■□□□ 1.38
CCDC180-213ENST00000534189 SF3B2Q13435 895 aaKnown RBP23.68■■□□□ 1.38
CCDC180-213ENST00000534189 KNDC1Q76NI1 1749 aa23.67■■□□□ 1.38
CCDC180-213ENST00000534189 UNC5CLQ8IV45 518 aa23.67■■□□□ 1.38
CCDC180-213ENST00000534189 SLIT2O94813 1529 aa23.66■■□□□ 1.38
CCDC180-213ENST00000534189 PLEKHH1Q9ULM0 1364 aa23.65■■□□□ 1.38
CCDC180-213ENST00000534189 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
CCDC180-213ENST00000534189 BRWD3Q6RI45 1802 aa23.64■■□□□ 1.38
CCDC180-213ENST00000534189 PXDNQ92626 1479 aa23.64■■□□□ 1.38
CCDC180-213ENST00000534189 NPHP3Q7Z494 1330 aa23.63■■□□□ 1.37
CCDC180-213ENST00000534189 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
CCDC180-213ENST00000534189 ESCO1Q5FWF5 840 aa23.63■■□□□ 1.37
CCDC180-213ENST00000534189 SEPT12Q8IYM1 358 aa23.61■■□□□ 1.37
CCDC180-213ENST00000534189 POGKQ9P215 609 aa23.61■■□□□ 1.37
CCDC180-213ENST00000534189 ONECUT3O60422 494 aaPredicted RBP23.6■■□□□ 1.37
CCDC180-213ENST00000534189 PRAM1Q96QH2 718 aa23.6■■□□□ 1.37
CCDC180-213ENST00000534189 NUTM2FA1L443 756 aa23.59■■□□□ 1.37
CCDC180-213ENST00000534189 SAFB2Q14151 953 aaKnown RBP eCLIP23.57■■□□□ 1.36
CCDC180-213ENST00000534189 TRAK1Q9UPV9 953 aa23.57■■□□□ 1.36
CCDC180-213ENST00000534189 DLC1Q96QB1 1528 aa23.57■■□□□ 1.36
CCDC180-213ENST00000534189 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
CCDC180-213ENST00000534189 FOXO3O43524 673 aa23.55■■□□□ 1.36
CCDC180-213ENST00000534189 BAG6P46379 1132 aa23.54■■□□□ 1.36
CCDC180-213ENST00000534189 VPS72Q15906 364 aa23.54■■□□□ 1.36
CCDC180-213ENST00000534189 KRT27Q7Z3Y8 459 aa23.54■■□□□ 1.36
CCDC180-213ENST00000534189 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
CCDC180-213ENST00000534189 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
CCDC180-213ENST00000534189 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
CCDC180-213ENST00000534189 YY1P25490 414 aa23.48■■□□□ 1.35
CCDC180-213ENST00000534189 PHF8Q9UPP1 1060 aa23.48■■□□□ 1.35
CCDC180-213ENST00000534189 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
CCDC180-213ENST00000534189 R3HDM1Q15032 1099 aaKnown RBP23.46■■□□□ 1.35
CCDC180-213ENST00000534189 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
CCDC180-213ENST00000534189 EN1Q05925 392 aaPredicted RBP23.45■■□□□ 1.34
CCDC180-213ENST00000534189 TRIM26Q12899 539 aaPredicted RBP23.45■■□□□ 1.34
CCDC180-213ENST00000534189 HIRIP3Q9BW71 556 aaPredicted RBP23.45■■□□□ 1.34
CCDC180-213ENST00000534189 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
CCDC180-213ENST00000534189 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
CCDC180-213ENST00000534189 KRT28Q7Z3Y7 464 aa23.44■■□□□ 1.34
CCDC180-213ENST00000534189 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
CCDC180-213ENST00000534189 ANKARQ7Z5J8 1434 aa23.43■■□□□ 1.34
CCDC180-213ENST00000534189 PSME1Q06323 249 aa23.43■■□□□ 1.34
CCDC180-213ENST00000534189 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
CCDC180-213ENST00000534189 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
CCDC180-213ENST00000534189 WASLO00401 505 aaPredicted RBP23.42■■□□□ 1.34
CCDC180-213ENST00000534189 ADGRB2O60241 1585 aa23.42■■□□□ 1.34
CCDC180-213ENST00000534189 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
CCDC180-213ENST00000534189 NWD2Q9ULI1 1742 aa23.41■■□□□ 1.34
CCDC180-213ENST00000534189 DISP2A7MBM2 1401 aa23.41■■□□□ 1.34
CCDC180-213ENST00000534189 NBPF1Q3BBV0 1214 aa23.4■■□□□ 1.34
CCDC180-213ENST00000534189 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
CCDC180-213ENST00000534189 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
CCDC180-213ENST00000534189 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
CCDC180-213ENST00000534189 PLCH1Q4KWH8 1693 aa23.38■■□□□ 1.33
CCDC180-213ENST00000534189 RGPD1P0DJD0 1748 aa23.36■■□□□ 1.33
CCDC180-213ENST00000534189 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
CCDC180-213ENST00000534189 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms