RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 NCKAP5LQ9HCH0 1330 aa12.89□□□□□ -0.35
RTL1-201ENST00000534062 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
RTL1-201ENST00000534062 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
RTL1-201ENST00000534062 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
RTL1-201ENST00000534062 PTPRMP28827 1452 aa12.88□□□□□ -0.35
RTL1-201ENST00000534062 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
RTL1-201ENST00000534062 SETBP1Q9Y6X0 1596 aa12.88□□□□□ -0.35
RTL1-201ENST00000534062 UBR1Q8IWV7 1749 aa12.87□□□□□ -0.35
RTL1-201ENST00000534062 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
RTL1-201ENST00000534062 PLEKHG1Q9ULL1 1385 aa12.87□□□□□ -0.35
RTL1-201ENST00000534062 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
RTL1-201ENST00000534062 RALBP1Q15311 655 aa12.86□□□□□ -0.35
RTL1-201ENST00000534062 HDGFL2Q7Z4V5 671 aaPredicted RBP12.85□□□□□ -0.35
RTL1-201ENST00000534062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTL1-201ENST00000534062 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
RTL1-201ENST00000534062 TBX22Q9Y458 520 aa12.85□□□□□ -0.35
RTL1-201ENST00000534062 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
RTL1-201ENST00000534062 KCNA6P17658 529 aa12.85□□□□□ -0.35
RTL1-201ENST00000534062 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
RTL1-201ENST00000534062 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
RTL1-201ENST00000534062 MORC1Q86VD1 984 aa12.84□□□□□ -0.35
RTL1-201ENST00000534062 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
RTL1-201ENST00000534062 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
RTL1-201ENST00000534062 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
RTL1-201ENST00000534062 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
RTL1-201ENST00000534062 UBE2Q2Q8WVN8 375 aa12.84□□□□□ -0.35
RTL1-201ENST00000534062 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.35
RTL1-201ENST00000534062 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
RTL1-201ENST00000534062 MYBBP1AQ9BQG0 1328 aaKnown RBP12.83□□□□□ -0.36
RTL1-201ENST00000534062 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
RTL1-201ENST00000534062 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
RTL1-201ENST00000534062 FKBP8Q14318 412 aa12.83□□□□□ -0.36
RTL1-201ENST00000534062 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
RTL1-201ENST00000534062 ADAMTS13Q76LX8 1427 aa12.82□□□□□ -0.36
RTL1-201ENST00000534062 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
RTL1-201ENST00000534062 KDM5AP29375 1690 aaKnown RBP12.82□□□□□ -0.36
RTL1-201ENST00000534062 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
RTL1-201ENST00000534062 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
RTL1-201ENST00000534062 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
RTL1-201ENST00000534062 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
RTL1-201ENST00000534062 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
RTL1-201ENST00000534062 ATAD2Q6PL18 1390 aa12.81□□□□□ -0.36
RTL1-201ENST00000534062 GGNBP2Q9H3C7 697 aa12.81□□□□□ -0.36
RTL1-201ENST00000534062 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
RTL1-201ENST00000534062 PMFBP1Q8TBY8 1022 aa12.81□□□□□ -0.36
RTL1-201ENST00000534062 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
RTL1-201ENST00000534062 SOX12O15370 315 aa12.8□□□□□ -0.36
RTL1-201ENST00000534062 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
RTL1-201ENST00000534062 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
RTL1-201ENST00000534062 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
RTL1-201ENST00000534062 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
RTL1-201ENST00000534062 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
RTL1-201ENST00000534062 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
RTL1-201ENST00000534062 SLIT1O75093 1534 aa12.78□□□□□ -0.36
RTL1-201ENST00000534062 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.36
RTL1-201ENST00000534062 TULP4Q9NRJ4 1543 aa12.77□□□□□ -0.36
RTL1-201ENST00000534062 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.37
RTL1-201ENST00000534062 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
RTL1-201ENST00000534062 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
RTL1-201ENST00000534062 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
RTL1-201ENST00000534062 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
RTL1-201ENST00000534062 NRXN3Q9Y4C0 1643 aa12.75□□□□□ -0.37
RTL1-201ENST00000534062 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
RTL1-201ENST00000534062 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
RTL1-201ENST00000534062 ANKRD36BQ8N2N9 1353 aa12.75□□□□□ -0.37
RTL1-201ENST00000534062 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
RTL1-201ENST00000534062 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
RTL1-201ENST00000534062 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
RTL1-201ENST00000534062 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
RTL1-201ENST00000534062 FAM135BQ49AJ0 1406 aa12.73□□□□□ -0.37
RTL1-201ENST00000534062 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
RTL1-201ENST00000534062 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
RTL1-201ENST00000534062 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
RTL1-201ENST00000534062 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
RTL1-201ENST00000534062 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
RTL1-201ENST00000534062 FBLN1P23142 703 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 NME9Q86XW9 330 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.37
RTL1-201ENST00000534062 DLC1Q96QB1 1528 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 ACEP12821 1306 aa12.71□□□□□ -0.37
RTL1-201ENST00000534062 MTHFSP49914 203 aa12.71□□□□□ -0.38
RTL1-201ENST00000534062 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
RTL1-201ENST00000534062 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 FYB1O15117 783 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 COG3Q96JB2 828 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
RTL1-201ENST00000534062 XPCQ01831 940 aaPredicted RBP12.69□□□□□ -0.38
RTL1-201ENST00000534062 TECPR2O15040 1411 aa12.69□□□□□ -0.38
RTL1-201ENST00000534062 ATF3P18847 181 aa12.69□□□□□ -0.38
RTL1-201ENST00000534062 MED14O60244 1454 aa12.68□□□□□ -0.38
RTL1-201ENST00000534062 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
RTL1-201ENST00000534062 MYOM1P52179 1685 aa12.68□□□□□ -0.38
RTL1-201ENST00000534062 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
RTL1-201ENST00000534062 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
RTL1-201ENST00000534062 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
RTL1-201ENST00000534062 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms