RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CYP4X1Q8N118 509 aa8.21□□□□□ -1.1
BRCA2-205ENST00000533776 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
BRCA2-205ENST00000533776 DAXXQ9UER7 740 aaPredicted RBP8.21□□□□□ -1.1
BRCA2-205ENST00000533776 NR1I2O75469 434 aa8.2□□□□□ -1.1
BRCA2-205ENST00000533776 KCNMA1Q12791 1236 aa8.2□□□□□ -1.1
BRCA2-205ENST00000533776 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
BRCA2-205ENST00000533776 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
BRCA2-205ENST00000533776 ADH1BP00325 375 aa8.19□□□□□ -1.1
BRCA2-205ENST00000533776 XP32Q5T750 250 aa8.17□□□□□ -1.1
BRCA2-205ENST00000533776 IRF7Q92985 503 aa8.17□□□□□ -1.1
BRCA2-205ENST00000533776 NXF1Q9UBU9 619 aaKnown RBP8.17□□□□□ -1.1
BRCA2-205ENST00000533776 RPIAP49247 311 aa8.16□□□□□ -1.1
BRCA2-205ENST00000533776 SCUBE3Q8IX30 993 aa8.16□□□□□ -1.1
BRCA2-205ENST00000533776 KIFC2Q96AC6 838 aa8.16□□□□□ -1.1
BRCA2-205ENST00000533776 FUT2Q10981 343 aa8.15□□□□□ -1.1
BRCA2-205ENST00000533776 MAP2K5Q13163 448 aa8.15□□□□□ -1.1
BRCA2-205ENST00000533776 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
BRCA2-205ENST00000533776 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
BRCA2-205ENST00000533776 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
BRCA2-205ENST00000533776 GCGRP47871 477 aa8.13□□□□□ -1.11
BRCA2-205ENST00000533776 MORN1Q5T089 497 aa8.13□□□□□ -1.11
BRCA2-205ENST00000533776 SPSB2Q99619 263 aa8.13□□□□□ -1.11
BRCA2-205ENST00000533776 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
BRCA2-205ENST00000533776 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
BRCA2-205ENST00000533776 SMPD1P17405 629 aa8.11□□□□□ -1.11
BRCA2-205ENST00000533776 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
BRCA2-205ENST00000533776 IRF6O14896 467 aa8.1□□□□□ -1.11
BRCA2-205ENST00000533776 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
BRCA2-205ENST00000533776 CCDC102AQ96A19 550 aa8.1□□□□□ -1.11
BRCA2-205ENST00000533776 SLC27A5Q9Y2P5 690 aa8.1□□□□□ -1.11
BRCA2-205ENST00000533776 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
BRCA2-205ENST00000533776 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
BRCA2-205ENST00000533776 H3BM21 787 aa8.09□□□□□ -1.11
BRCA2-205ENST00000533776 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
BRCA2-205ENST00000533776 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
BRCA2-205ENST00000533776 CD46P15529 392 aa8.08□□□□□ -1.12
BRCA2-205ENST00000533776 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
BRCA2-205ENST00000533776 KRTAP9-2Q9BYQ4 174 aa8.08□□□□□ -1.12
BRCA2-205ENST00000533776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA2-205ENST00000533776 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
BRCA2-205ENST00000533776 GRIPAP1Q4V328 841 aa8.06□□□□□ -1.12
BRCA2-205ENST00000533776 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
BRCA2-205ENST00000533776 RNF19BQ6ZMZ0 732 aa8.05□□□□□ -1.12
BRCA2-205ENST00000533776 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
BRCA2-205ENST00000533776 FCF1Q9Y324 198 aaKnown RBP8.05□□□□□ -1.12
BRCA2-205ENST00000533776 KRTAP9-6A0A140TA67 174 aa8.04□□□□□ -1.12
BRCA2-205ENST00000533776 GDF11O95390 407 aa8.04□□□□□ -1.12
BRCA2-205ENST00000533776 VEGFBP49765 207 aa8.04□□□□□ -1.12
BRCA2-205ENST00000533776 KDM4AO75164 1064 aa8.03□□□□□ -1.12
BRCA2-205ENST00000533776 RASSF7Q02833 373 aa8.03□□□□□ -1.12
BRCA2-205ENST00000533776 BRICD5Q6PL45 260 aa8.03□□□□□ -1.12
BRCA2-205ENST00000533776 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
BRCA2-205ENST00000533776 HLA-CQ95604 372 aa8.02□□□□□ -1.13
BRCA2-205ENST00000533776 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
BRCA2-205ENST00000533776 SALL2Q9Y467 1007 aaPredicted RBP8.02□□□□□ -1.13
BRCA2-205ENST00000533776 J3QL48 77 aa8.01□□□□□ -1.13
BRCA2-205ENST00000533776 CLCN1P35523 988 aa8.01□□□□□ -1.13
BRCA2-205ENST00000533776 Q3C1V9 767 aa8.01□□□□□ -1.13
BRCA2-205ENST00000533776 MSS51Q4VC12 460 aa8.01□□□□□ -1.13
BRCA2-205ENST00000533776 KRI1Q8N9T8 703 aaKnown RBP8.01□□□□□ -1.13
BRCA2-205ENST00000533776 WNT7AO00755 349 aa8□□□□□ -1.13
BRCA2-205ENST00000533776 HPS1Q92902 700 aa8□□□□□ -1.13
BRCA2-205ENST00000533776 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
BRCA2-205ENST00000533776 HOXA2O43364 376 aa7.99□□□□□ -1.13
BRCA2-205ENST00000533776 GUCA2AQ02747 115 aa7.99□□□□□ -1.13
BRCA2-205ENST00000533776 USP46P62068 366 aa7.98□□□□□ -1.13
BRCA2-205ENST00000533776 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
BRCA2-205ENST00000533776 ZBTB24O43167 697 aaPredicted RBP7.96□□□□□ -1.14
BRCA2-205ENST00000533776 BARGINQ6ZT62 677 aa7.96□□□□□ -1.14
BRCA2-205ENST00000533776 NUTM1Q86Y26 1132 aa7.96□□□□□ -1.14
BRCA2-205ENST00000533776 ZC3H15Q8WU90 426 aaKnown RBP7.96□□□□□ -1.14
BRCA2-205ENST00000533776 PSMG3-AS1Q96PY0 264 aa7.96□□□□□ -1.14
BRCA2-205ENST00000533776 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
BRCA2-205ENST00000533776 ZMYND10O75800 440 aa7.95□□□□□ -1.14
BRCA2-205ENST00000533776 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
BRCA2-205ENST00000533776 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
BRCA2-205ENST00000533776 MMP16P51512 607 aa7.94□□□□□ -1.14
BRCA2-205ENST00000533776 DXOO77932 396 aaKnown RBP7.93□□□□□ -1.14
BRCA2-205ENST00000533776 IGHA1P01876 353 aa7.93□□□□□ -1.14
BRCA2-205ENST00000533776 VSIG8P0DPA2 414 aa7.93□□□□□ -1.14
BRCA2-205ENST00000533776 SSTR3P32745 418 aaPredicted RBP7.93□□□□□ -1.14
BRCA2-205ENST00000533776 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
BRCA2-205ENST00000533776 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
BRCA2-205ENST00000533776 MRGPRX2Q96LB1 330 aa7.93□□□□□ -1.14
BRCA2-205ENST00000533776 GPAT2Q6NUI2 795 aa7.91□□□□□ -1.14
BRCA2-205ENST00000533776 FDX1P10109 184 aa7.9□□□□□ -1.14
BRCA2-205ENST00000533776 TRIM32Q13049 653 aa7.9□□□□□ -1.14
BRCA2-205ENST00000533776 AMHR2Q16671 573 aa7.9□□□□□ -1.14
BRCA2-205ENST00000533776 GIGYF2Q6Y7W6 1299 aaKnown RBP7.9□□□□□ -1.14
BRCA2-205ENST00000533776 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
BRCA2-205ENST00000533776 RNF225M0QZC1 329 aaPredicted RBP7.89□□□□□ -1.15
BRCA2-205ENST00000533776 JUNDP17535 347 aa7.89□□□□□ -1.15
BRCA2-205ENST00000533776 SPIRE2Q8WWL2 714 aa7.89□□□□□ -1.15
BRCA2-205ENST00000533776 C6orf229H3BNL8 230 aa7.88□□□□□ -1.15
BRCA2-205ENST00000533776 NDUFV2P19404 249 aa7.88□□□□□ -1.15
BRCA2-205ENST00000533776 RETREG3Q86VR2 466 aa7.88□□□□□ -1.15
BRCA2-205ENST00000533776 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
BRCA2-205ENST00000533776 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
BRCA2-205ENST00000533776 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
BRCA2-205ENST00000533776 BMP1P13497 986 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms