RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
PACS1-213ENST00000533756 SLIT2O94813 1529 aa14.36□□□□□ -0.11
PACS1-213ENST00000533756 MARF1Q9Y4F3 1742 aaKnown RBP14.36□□□□□ -0.11
PACS1-213ENST00000533756 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
PACS1-213ENST00000533756 HOXD11P31277 338 aaPredicted RBP14.36□□□□□ -0.11
PACS1-213ENST00000533756 ORAI2Q96SN7 254 aa14.36□□□□□ -0.11
PACS1-213ENST00000533756 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
PACS1-213ENST00000533756 GCC2Q8IWJ2 1684 aa14.35□□□□□ -0.11
PACS1-213ENST00000533756 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
PACS1-213ENST00000533756 VPS72Q15906 364 aa14.33□□□□□ -0.12
PACS1-213ENST00000533756 NINLQ9Y2I6 1382 aa14.33□□□□□ -0.12
PACS1-213ENST00000533756 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
PACS1-213ENST00000533756 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
PACS1-213ENST00000533756 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
PACS1-213ENST00000533756 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
PACS1-213ENST00000533756 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
PACS1-213ENST00000533756 NALCNQ8IZF0 1738 aa14.29□□□□□ -0.12
PACS1-213ENST00000533756 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
PACS1-213ENST00000533756 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
PACS1-213ENST00000533756 SPON1Q9HCB6 807 aa14.28□□□□□ -0.12
PACS1-213ENST00000533756 METP08581 1390 aa14.27□□□□□ -0.12
PACS1-213ENST00000533756 ABCC5O15440 1437 aa14.26□□□□□ -0.13
PACS1-213ENST00000533756 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
PACS1-213ENST00000533756 CCDC9Q9Y3X0 531 aaKnown RBP14.26□□□□□ -0.13
PACS1-213ENST00000533756 KCNQ2O43526 872 aa14.25□□□□□ -0.13
PACS1-213ENST00000533756 PXDNQ92626 1479 aa14.25□□□□□ -0.13
PACS1-213ENST00000533756 PARD3Q8TEW0 1356 aa14.24□□□□□ -0.13
PACS1-213ENST00000533756 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
PACS1-213ENST00000533756 NRXN3Q9Y4C0 1643 aa14.24□□□□□ -0.13
PACS1-213ENST00000533756 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
PACS1-213ENST00000533756 A0A0G2JS52 829 aa14.23□□□□□ -0.13
PACS1-213ENST00000533756 MYT1Q01538 1121 aa14.23□□□□□ -0.13
PACS1-213ENST00000533756 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
PACS1-213ENST00000533756 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
PACS1-213ENST00000533756 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
PACS1-213ENST00000533756 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
PACS1-213ENST00000533756 ADGRL2O95490 1459 aa14.22□□□□□ -0.13
PACS1-213ENST00000533756 FOXO3O43524 673 aa14.21□□□□□ -0.13
PACS1-213ENST00000533756 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
PACS1-213ENST00000533756 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
PACS1-213ENST00000533756 FAM98CQ17RN3 349 aaKnown RBP14.19□□□□□ -0.14
PACS1-213ENST00000533756 CAMTA1Q9Y6Y1 1673 aa14.19□□□□□ -0.14
PACS1-213ENST00000533756 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
PACS1-213ENST00000533756 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
PACS1-213ENST00000533756 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
PACS1-213ENST00000533756 DAPK1P53355 1430 aa14.18□□□□□ -0.14
PACS1-213ENST00000533756 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
PACS1-213ENST00000533756 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
PACS1-213ENST00000533756 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
PACS1-213ENST00000533756 FAM182BQ5T319 152 aa14.17□□□□□ -0.14
PACS1-213ENST00000533756 CEP350Q5VT06 3117 aa14.16□□□□□ -0.14
PACS1-213ENST00000533756 UTRNP46939 3433 aa14.16□□□□□ -0.14
PACS1-213ENST00000533756 APBA3O96018 575 aa14.16□□□□□ -0.14
PACS1-213ENST00000533756 HAP1P54257 671 aaPredicted RBP14.15□□□□□ -0.14
PACS1-213ENST00000533756 FAM196AQ6ZSG2 479 aa14.15□□□□□ -0.14
PACS1-213ENST00000533756 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
PACS1-213ENST00000533756 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
PACS1-213ENST00000533756 TRIM37O94972 964 aa14.14□□□□□ -0.15
PACS1-213ENST00000533756 IQGAP3Q86VI3 1631 aa14.14□□□□□ -0.15
PACS1-213ENST00000533756 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
PACS1-213ENST00000533756 PLCH1Q4KWH8 1693 aa14.13□□□□□ -0.15
PACS1-213ENST00000533756 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
PACS1-213ENST00000533756 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
PACS1-213ENST00000533756 RREB1Q92766 1687 aa14.1□□□□□ -0.15
PACS1-213ENST00000533756 ANKRD50Q9ULJ7 1429 aa14.1□□□□□ -0.15
PACS1-213ENST00000533756 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
PACS1-213ENST00000533756 CHD4Q14839 1912 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
PACS1-213ENST00000533756 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 CABLES1Q8TDN4 633 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 NUP188Q5SRE5 1749 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
PACS1-213ENST00000533756 E9PCH4 1651 aa14.08□□□□□ -0.16
PACS1-213ENST00000533756 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
PACS1-213ENST00000533756 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
PACS1-213ENST00000533756 SPATA31A5Q5VU36 1347 aa14.07□□□□□ -0.16
PACS1-213ENST00000533756 SPATA31A7Q8IWB4 1347 aa14.07□□□□□ -0.16
PACS1-213ENST00000533756 PSME1Q06323 249 aa14.06□□□□□ -0.16
PACS1-213ENST00000533756 SYT17Q9BSW7 474 aa14.06□□□□□ -0.16
PACS1-213ENST00000533756 THSD7AQ9UPZ6 1657 aa14.05□□□□□ -0.16
PACS1-213ENST00000533756 TNS3Q68CZ2 1445 aa14.05□□□□□ -0.16
PACS1-213ENST00000533756 NRKQ7Z2Y5 1582 aa14.04□□□□□ -0.16
PACS1-213ENST00000533756 NRAPQ86VF7 1730 aa14.04□□□□□ -0.16
PACS1-213ENST00000533756 NEXMIFQ5QGS0 1516 aa14.03□□□□□ -0.16
PACS1-213ENST00000533756 ARHGEF10O15013 1369 aa14.02□□□□□ -0.17
PACS1-213ENST00000533756 PTGER2P43116 358 aa14.02□□□□□ -0.17
PACS1-213ENST00000533756 FHDC1Q9C0D6 1143 aaPredicted RBP14.02□□□□□ -0.17
PACS1-213ENST00000533756 SBNO1A3KN83 1393 aa14.01□□□□□ -0.17
PACS1-213ENST00000533756 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
PACS1-213ENST00000533756 KIF1AQ12756 1690 aa14.01□□□□□ -0.17
PACS1-213ENST00000533756 NAIPQ13075 1403 aa14□□□□□ -0.17
PACS1-213ENST00000533756 KCNA4P22459 653 aa14□□□□□ -0.17
PACS1-213ENST00000533756 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
PACS1-213ENST00000533756 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
PACS1-213ENST00000533756 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
PACS1-213ENST00000533756 ZBTB7AO95365 584 aa13.98□□□□□ -0.17
PACS1-213ENST00000533756 PDE3BQ13370 1112 aa13.98□□□□□ -0.17
PACS1-213ENST00000533756 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
PACS1-213ENST00000533756 CASZ1Q86V15 1759 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms