RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 KNDC1Q76NI1 1749 aa29.43■■■□□ 2.3
AP004608.1-202ENST00000533390 SRPK2P78362 688 aaKnown RBP29.42■■■□□ 2.3
AP004608.1-202ENST00000533390 EID1Q9Y6B2 187 aa29.41■■■□□ 2.3
AP004608.1-202ENST00000533390 NINLQ9Y2I6 1382 aa29.41■■■□□ 2.3
AP004608.1-202ENST00000533390 METP08581 1390 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 PLEKHG1Q9ULL1 1385 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 NSD3Q9BZ95 1437 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 SLIT1O75093 1534 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 PPP2R1AP30153 589 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
AP004608.1-202ENST00000533390 TXNDC2Q86VQ3 553 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 USP32Q8NFA0 1604 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 ANKRD36BQ8N2N9 1353 aa29.38■■■□□ 2.29
AP004608.1-202ENST00000533390 THEMISQ8N1K5 641 aaPredicted RBP29.37■■■□□ 2.29
AP004608.1-202ENST00000533390 ARHGAP23Q9P227 1491 aa29.37■■■□□ 2.29
AP004608.1-202ENST00000533390 LTKP29376 864 aa29.36■■■□□ 2.29
AP004608.1-202ENST00000533390 ADAMTSL3P82987 1691 aa29.35■■■□□ 2.29
AP004608.1-202ENST00000533390 ADAMTS13Q76LX8 1427 aa29.34■■■□□ 2.29
AP004608.1-202ENST00000533390 WAPLQ7Z5K2 1190 aa29.34■■■□□ 2.29
AP004608.1-202ENST00000533390 TECPR2O15040 1411 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 CPS1P31327 1500 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 SIRT1Q96EB6 747 aa29.33■■■□□ 2.29
AP004608.1-202ENST00000533390 CDK19Q9BWU1 502 aa29.32■■■□□ 2.28
AP004608.1-202ENST00000533390 FAM135BQ49AJ0 1406 aa29.32■■■□□ 2.28
AP004608.1-202ENST00000533390 PLEKHH1Q9ULM0 1364 aa29.31■■■□□ 2.28
AP004608.1-202ENST00000533390 CGNL1Q0VF96 1302 aa29.31■■■□□ 2.28
AP004608.1-202ENST00000533390 CEP170BQ9Y4F5 1589 aaPredicted RBP29.3■■■□□ 2.28
AP004608.1-202ENST00000533390 INSRP06213 1382 aa29.3■■■□□ 2.28
AP004608.1-202ENST00000533390 TERF2IPQ9NYB0 399 aa29.27■■■□□ 2.28
AP004608.1-202ENST00000533390 MED14O60244 1454 aa29.26■■■□□ 2.27
AP004608.1-202ENST00000533390 MORC1Q86VD1 984 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 A0A1W2PP64 1363 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 NSD2O96028 1365 aa29.25■■■□□ 2.27
AP004608.1-202ENST00000533390 DIP2AQ14689 1571 aa29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 NEFLP07196 543 aa29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 WDR43Q15061 677 aaKnown RBP eCLIP29.23■■■□□ 2.27
AP004608.1-202ENST00000533390 ZNF142P52746 1687 aaPredicted RBP29.22■■■□□ 2.27
AP004608.1-202ENST00000533390 HDGFL2Q7Z4V5 671 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 BLMP54132 1417 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 WASLO00401 505 aaPredicted RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 SLC26A8Q96RN1 970 aa29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 SETD1BQ9UPS6 1966 aaKnown RBP29.21■■■□□ 2.27
AP004608.1-202ENST00000533390 TBX22Q9Y458 520 aa29.2■■■□□ 2.26
AP004608.1-202ENST00000533390 CD163L1Q9NR16 1453 aa29.18■■■□□ 2.26
AP004608.1-202ENST00000533390 CABP1Q9NZU7 370 aa29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 SUPT16HQ9Y5B9 1047 aaKnown RBP29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 ROBO2Q9HCK4 1378 aa29.17■■■□□ 2.26
AP004608.1-202ENST00000533390 ATP7BP35670 1465 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 ADAMTS8Q9UP79 889 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 ANKRD26Q9UPS8 1709 aa29.15■■■□□ 2.26
AP004608.1-202ENST00000533390 PTPRUQ92729 1446 aa29.14■■■□□ 2.25
AP004608.1-202ENST00000533390 ADGRB2O60241 1585 aa29.13■■■□□ 2.25
AP004608.1-202ENST00000533390 SMG6Q86US8 1419 aaKnown RBP29.13■■■□□ 2.25
AP004608.1-202ENST00000533390 POLR3AO14802 1390 aaPredicted RBP29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 SENP3-EIF4A1A0A087X0R7 540 aa29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 FKBP8Q14318 412 aa29.12■■■□□ 2.25
AP004608.1-202ENST00000533390 KIF20BQ96Q89 1820 aa29.11■■■□□ 2.25
AP004608.1-202ENST00000533390 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.11■■■□□ 2.25
AP004608.1-202ENST00000533390 TNNT2P45379 298 aaPredicted RBP29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 NUDCQ9Y266 331 aa29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 AMOTL2Q9Y2J4 779 aa29.1■■■□□ 2.25
AP004608.1-202ENST00000533390 PPIP5K1Q6PFW1 1433 aa29.09■■■□□ 2.25
AP004608.1-202ENST00000533390 NUDT16Q96DE0 195 aaKnown RBP29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 ANKLE2Q86XL3 938 aa29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 PTCH1Q13635 1447 aa29.08■■■□□ 2.25
AP004608.1-202ENST00000533390 SALL2Q9Y467 1007 aaPredicted RBP29.06■■■□□ 2.24
AP004608.1-202ENST00000533390 CCDC61Q9Y6R9 512 aa29.06■■■□□ 2.24
AP004608.1-202ENST00000533390 PDE3BQ13370 1112 aa29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 PIK3R4Q99570 1358 aa29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 XRN1Q8IZH2 1706 aaKnown RBP29.05■■■□□ 2.24
AP004608.1-202ENST00000533390 CFAP53Q96M91 514 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 GGNBP2Q9H3C7 697 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 FYB1O15117 783 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 ITSN1Q15811 1721 aa29.04■■■□□ 2.24
AP004608.1-202ENST00000533390 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
AP004608.1-202ENST00000533390 CPSF1Q10570 1443 aaKnown RBP29.02■■■□□ 2.24
AP004608.1-202ENST00000533390 MTHFSP49914 203 aa29.02■■■□□ 2.24
AP004608.1-202ENST00000533390 SHPRHQ149N8 1683 aa29.01■■■□□ 2.23
AP004608.1-202ENST00000533390 AKAP12Q02952 1782 aa29■■■□□ 2.23
AP004608.1-202ENST00000533390 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
AP004608.1-202ENST00000533390 EDC4Q6P2E9 1401 aaKnown RBP28.99■■■□□ 2.23
AP004608.1-202ENST00000533390 TOPAZ1Q8N9V7 1692 aa28.98■■■□□ 2.23
AP004608.1-202ENST00000533390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.97■■■□□ 2.23
AP004608.1-202ENST00000533390 PRR36Q9H6K5 1346 aa28.97■■■□□ 2.23
AP004608.1-202ENST00000533390 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.23
AP004608.1-202ENST00000533390 CHD2O14647 1828 aaKnown RBP28.95■■■□□ 2.22
AP004608.1-202ENST00000533390 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
AP004608.1-202ENST00000533390 CCDC146Q8IYE0 955 aa28.92■■■□□ 2.22
AP004608.1-202ENST00000533390 KCNA6P17658 529 aa28.91■■■□□ 2.22
AP004608.1-202ENST00000533390 NPHP4O75161 1426 aaPredicted RBP28.88■■■□□ 2.21
AP004608.1-202ENST00000533390 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 NUTM2FA1L443 756 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 NGEFQ8N5V2 710 aa28.87■■■□□ 2.21
AP004608.1-202ENST00000533390 APAF1O14727 1248 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 IRX6P78412 446 aaPredicted RBP28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 ERICH6BQ5W0A0 696 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 CDCA7LQ96GN5 454 aa28.85■■■□□ 2.21
AP004608.1-202ENST00000533390 ACEP12821 1306 aa28.84■■■□□ 2.21
AP004608.1-202ENST00000533390 NME9Q86XW9 330 aa28.83■■■□□ 2.21
AP004608.1-202ENST00000533390 MAP2P11137 1827 aaKnown RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms