RNA–Protein interactions for RNA: ENST00000533302.5

TRIM29-220, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-220ENST00000533302 MLECQ14165 292 aa8.57□□□□□ -1.04
TRIM29-220ENST00000533302 ILDR2Q71H61 639 aa8.57□□□□□ -1.04
TRIM29-220ENST00000533302 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 C3orf80F5H4A9 247 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 TSKSQ9UJT2 592 aa8.56□□□□□ -1.04
TRIM29-220ENST00000533302 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
TRIM29-220ENST00000533302 FHOD3Q2V2M9 1422 aa8.55□□□□□ -1.04
TRIM29-220ENST00000533302 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
TRIM29-220ENST00000533302 PTPREP23469 700 aa8.55□□□□□ -1.04
TRIM29-220ENST00000533302 SH3D19Q5HYK7 790 aa8.55□□□□□ -1.04
TRIM29-220ENST00000533302 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
TRIM29-220ENST00000533302 DISP3Q9P2K9 1392 aa8.55□□□□□ -1.04
TRIM29-220ENST00000533302 AKNAQ7Z591 1439 aa8.54□□□□□ -1.04
TRIM29-220ENST00000533302 KIF21BO75037 1637 aa8.54□□□□□ -1.04
TRIM29-220ENST00000533302 ADAMTSL3P82987 1691 aa8.54□□□□□ -1.04
TRIM29-220ENST00000533302 EYA1Q99502 592 aa8.54□□□□□ -1.04
TRIM29-220ENST00000533302 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
TRIM29-220ENST00000533302 RCCD1A6NED2 376 aa8.52□□□□□ -1.05
TRIM29-220ENST00000533302 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
TRIM29-220ENST00000533302 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
TRIM29-220ENST00000533302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
TRIM29-220ENST00000533302 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 NUDT18Q6ZVK8 323 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 FANCAO15360 1455 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 ABCA9Q8IUA7 1624 aa8.51□□□□□ -1.05
TRIM29-220ENST00000533302 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
TRIM29-220ENST00000533302 PROX2Q3B8N5 592 aa8.5□□□□□ -1.05
TRIM29-220ENST00000533302 KCNK17Q96T54 332 aa8.5□□□□□ -1.05
TRIM29-220ENST00000533302 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
TRIM29-220ENST00000533302 NUP153P49790 1475 aaKnown RBP8.5□□□□□ -1.05
TRIM29-220ENST00000533302 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
TRIM29-220ENST00000533302 EFCAB2Q5VUJ9 269 aa8.49□□□□□ -1.05
TRIM29-220ENST00000533302 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
TRIM29-220ENST00000533302 TATDN2Q93075 761 aa8.49□□□□□ -1.05
TRIM29-220ENST00000533302 PNMA3Q9UL41 463 aa8.49□□□□□ -1.05
TRIM29-220ENST00000533302 MADDQ8WXG6 1647 aa8.49□□□□□ -1.05
TRIM29-220ENST00000533302 SCAPERQ9BY12 1400 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 PROCA1Q8NCQ7 364 aaPredicted RBP8.48□□□□□ -1.05
TRIM29-220ENST00000533302 ZMYND15Q9H091 742 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 POLR3EQ9NVU0 708 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 BCORL1Q5H9F3 1711 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
TRIM29-220ENST00000533302 PLCH2O75038 1416 aa8.47□□□□□ -1.05
TRIM29-220ENST00000533302 SMAPO00193 183 aa8.47□□□□□ -1.05
TRIM29-220ENST00000533302 DNAJB2P25686 324 aa8.47□□□□□ -1.05
TRIM29-220ENST00000533302 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
TRIM29-220ENST00000533302 ATP10AO60312 1499 aa8.46□□□□□ -1.05
TRIM29-220ENST00000533302 CD46P15529 392 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 PSEN2P49810 448 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 AFAP1Q8N556 730 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 ZBED2Q9BTP6 218 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 TMEM134Q9H6X4 195 aa8.46□□□□□ -1.06
TRIM29-220ENST00000533302 ARHGEF40Q8TER5 1519 aa8.45□□□□□ -1.06
TRIM29-220ENST00000533302 POTEEQ6S8J3 1075 aa8.45□□□□□ -1.06
TRIM29-220ENST00000533302 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
TRIM29-220ENST00000533302 CDK11AQ9UQ88 783 aaPredicted RBP8.45□□□□□ -1.06
TRIM29-220ENST00000533302 ZFYVE16Q7Z3T8 1539 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 FLIIQ13045 1269 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
TRIM29-220ENST00000533302 LHX8Q68G74 356 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 ESF1Q9H501 851 aaKnown RBP8.44□□□□□ -1.06
TRIM29-220ENST00000533302 KIAA1468Q9P260 1216 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
TRIM29-220ENST00000533302 EFCAB5A4FU69 1503 aa8.44□□□□□ -1.06
TRIM29-220ENST00000533302 CLK2P49760 499 aaKnown RBP8.43□□□□□ -1.06
TRIM29-220ENST00000533302 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
TRIM29-220ENST00000533302 PTPRTO14522 1441 aa8.43□□□□□ -1.06
TRIM29-220ENST00000533302 C9orf84Q5VXU9 1444 aa8.43□□□□□ -1.06
TRIM29-220ENST00000533302 UHRF1BP1Q6BDS2 1440 aa8.43□□□□□ -1.06
TRIM29-220ENST00000533302 ZMYM4Q5VZL5 1548 aa8.43□□□□□ -1.06
TRIM29-220ENST00000533302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRIM29-220ENST00000533302 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
TRIM29-220ENST00000533302 SULF1Q8IWU6 871 aa8.42□□□□□ -1.06
TRIM29-220ENST00000533302 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
TRIM29-220ENST00000533302 ERBB3P21860 1342 aa8.42□□□□□ -1.06
TRIM29-220ENST00000533302 RAPGEF6Q8TEU7 1601 aa8.42□□□□□ -1.06
TRIM29-220ENST00000533302 SAMD9Q5K651 1589 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 ARHGEF12Q9NZN5 1544 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 ST18O60284 1047 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
TRIM29-220ENST00000533302 RIMS1Q86UR5 1692 aaKnown RBP8.4□□□□□ -1.06
TRIM29-220ENST00000533302 MCM6Q14566 821 aa8.4□□□□□ -1.06
TRIM29-220ENST00000533302 CTTNBP2Q8WZ74 1663 aa8.4□□□□□ -1.07
TRIM29-220ENST00000533302 TRAPPC8Q9Y2L5 1435 aa8.39□□□□□ -1.07
TRIM29-220ENST00000533302 RIC3Q7Z5B4 369 aa8.39□□□□□ -1.07
TRIM29-220ENST00000533302 HECW1Q76N89 1606 aa8.39□□□□□ -1.07
TRIM29-220ENST00000533302 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
TRIM29-220ENST00000533302 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms