RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
SOX9-AS1-212ENST00000533232 CCDC136Q96JN2 1154 aa10.44□□□□□ -0.74
SOX9-AS1-212ENST00000533232 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
SOX9-AS1-212ENST00000533232 CNGB1Q14028 1251 aaPredicted RBP10.43□□□□□ -0.74
SOX9-AS1-212ENST00000533232 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
SOX9-AS1-212ENST00000533232 TRPM2O94759 1503 aa10.43□□□□□ -0.74
SOX9-AS1-212ENST00000533232 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
SOX9-AS1-212ENST00000533232 PER1O15534 1290 aaPredicted RBP10.42□□□□□ -0.74
SOX9-AS1-212ENST00000533232 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
SOX9-AS1-212ENST00000533232 WDR7Q9Y4E6 1490 aa10.42□□□□□ -0.74
SOX9-AS1-212ENST00000533232 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 TESK2Q96S53 571 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 CEP152O94986 1710 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 DEPDC5O75140 1603 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 TET3O43151 1660 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
SOX9-AS1-212ENST00000533232 EIF3AQ14152 1382 aaKnown RBP10.4□□□□□ -0.74
SOX9-AS1-212ENST00000533232 PTPRTO14522 1441 aa10.4□□□□□ -0.74
SOX9-AS1-212ENST00000533232 SPHKAPQ2M3C7 1700 aa10.4□□□□□ -0.74
SOX9-AS1-212ENST00000533232 ZFYVE16Q7Z3T8 1539 aa10.4□□□□□ -0.74
SOX9-AS1-212ENST00000533232 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.75
SOX9-AS1-212ENST00000533232 MADDQ8WXG6 1647 aa10.39□□□□□ -0.75
SOX9-AS1-212ENST00000533232 KIAA1210Q9ULL0 1709 aa10.39□□□□□ -0.75
SOX9-AS1-212ENST00000533232 IQGAP1P46940 1657 aa10.39□□□□□ -0.75
SOX9-AS1-212ENST00000533232 PANK3Q9H999 370 aa10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 DISP3Q9P2K9 1392 aa10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 SCAF11Q99590 1463 aaKnown RBP10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 RRP1P56182 461 aaKnown RBP10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 BLMP54132 1417 aaPredicted RBP10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 ABCA9Q8IUA7 1624 aa10.38□□□□□ -0.75
SOX9-AS1-212ENST00000533232 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
SOX9-AS1-212ENST00000533232 SYNMO15061 1565 aa10.37□□□□□ -0.75
SOX9-AS1-212ENST00000533232 INO80Q9ULG1 1556 aaPredicted RBP10.37□□□□□ -0.75
SOX9-AS1-212ENST00000533232 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
SOX9-AS1-212ENST00000533232 VWDEQ8N2E2 1590 aa10.36□□□□□ -0.75
SOX9-AS1-212ENST00000533232 FANCAO15360 1455 aa10.36□□□□□ -0.75
SOX9-AS1-212ENST00000533232 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
SOX9-AS1-212ENST00000533232 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
SOX9-AS1-212ENST00000533232 CC2D1BQ5T0F9 858 aaKnown RBP10.35□□□□□ -0.75
SOX9-AS1-212ENST00000533232 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
SOX9-AS1-212ENST00000533232 ERBB3P21860 1342 aa10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 WDR43Q15061 677 aaKnown RBP eCLIP10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 AFAP1Q8N556 730 aa10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 PCDHB8Q9UN66 801 aa10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 MYOM2P54296 1465 aa10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 TCERG1O14776 1098 aaKnown RBP10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 NGEFQ8N5V2 710 aa10.33□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 KIF1BO60333 1816 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ASXL1Q8IXJ9 1541 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 KDM5AP29375 1690 aaKnown RBP10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 PYGBP11216 843 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 CFAP74Q9C0B2 1584 aa10.32□□□□□ -0.76
SOX9-AS1-212ENST00000533232 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
SOX9-AS1-212ENST00000533232 MAP3K4Q9Y6R4 1608 aa10.31□□□□□ -0.76
SOX9-AS1-212ENST00000533232 KIF3BO15066 747 aa10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 MS4A1P11836 297 aa10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 LMTK2Q8IWU2 1503 aa10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 HOXB3P14651 431 aaPredicted RBP10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 PTGER2P43116 358 aa10.3□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ZNF518AQ6AHZ1 1483 aa10.29□□□□□ -0.76
SOX9-AS1-212ENST00000533232 EFCAB6Q5THR3 1501 aa10.29□□□□□ -0.76
SOX9-AS1-212ENST00000533232 PPP2R1AP30153 589 aa10.29□□□□□ -0.76
SOX9-AS1-212ENST00000533232 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
SOX9-AS1-212ENST00000533232 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
SOX9-AS1-212ENST00000533232 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
SOX9-AS1-212ENST00000533232 EXOC6Q8TAG9 804 aa10.27□□□□□ -0.76
SOX9-AS1-212ENST00000533232 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.76
SOX9-AS1-212ENST00000533232 ASXL2Q76L83 1435 aa10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 SETBP1Q9Y6X0 1596 aa10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 IFT172Q9UG01 1749 aa10.27□□□□□ -0.77
SOX9-AS1-212ENST00000533232 MROH1Q8NDA8 1641 aa10.26□□□□□ -0.77
SOX9-AS1-212ENST00000533232 MYO3AQ8NEV4 1616 aa10.26□□□□□ -0.77
SOX9-AS1-212ENST00000533232 MYOM1P52179 1685 aa10.26□□□□□ -0.77
SOX9-AS1-212ENST00000533232 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-212ENST00000533232 RPGRIP1LQ68CZ1 1315 aa10.25□□□□□ -0.77
SOX9-AS1-212ENST00000533232 NRXN1Q9ULB1 1477 aa10.25□□□□□ -0.77
SOX9-AS1-212ENST00000533232 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
SOX9-AS1-212ENST00000533232 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
SOX9-AS1-212ENST00000533232 G3V3G9 751 aa10.24□□□□□ -0.77
SOX9-AS1-212ENST00000533232 CDCA7LQ96GN5 454 aa10.24□□□□□ -0.77
SOX9-AS1-212ENST00000533232 MLH3Q9UHC1 1453 aa10.23□□□□□ -0.77
SOX9-AS1-212ENST00000533232 ADGRB3O60242 1522 aa10.23□□□□□ -0.77
SOX9-AS1-212ENST00000533232 PPRC1Q5VV67 1664 aaKnown RBP10.22□□□□□ -0.77
SOX9-AS1-212ENST00000533232 ERVK-7P63135 1459 aa10.22□□□□□ -0.77
SOX9-AS1-212ENST00000533232 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
SOX9-AS1-212ENST00000533232 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
SOX9-AS1-212ENST00000533232 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms