RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
LTBP3-221ENST00000532932 FOXD4L1Q9NU39 408 aa18.69■□□□□ 0.58
LTBP3-221ENST00000532932 TRAK1Q9UPV9 953 aa18.69■□□□□ 0.58
LTBP3-221ENST00000532932 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
LTBP3-221ENST00000532932 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
LTBP3-221ENST00000532932 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
LTBP3-221ENST00000532932 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
LTBP3-221ENST00000532932 ATP10AO60312 1499 aa18.68■□□□□ 0.58
LTBP3-221ENST00000532932 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
LTBP3-221ENST00000532932 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
LTBP3-221ENST00000532932 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
LTBP3-221ENST00000532932 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
LTBP3-221ENST00000532932 MRE11P49959 708 aa18.67■□□□□ 0.58
LTBP3-221ENST00000532932 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
LTBP3-221ENST00000532932 GLIPR1L2Q4G1C9 344 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
LTBP3-221ENST00000532932 CLCN1P35523 988 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 AAMPQ13685 434 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 WDR63Q8IWG1 891 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 GRPEL1Q9HAV7 217 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
LTBP3-221ENST00000532932 TRIM44Q96DX7 344 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-221ENST00000532932 VIRMAQ69YN4 1812 aaKnown RBP18.65■□□□□ 0.58
LTBP3-221ENST00000532932 HSP90AA2PQ14568 343 aaPredicted RBP18.65■□□□□ 0.58
LTBP3-221ENST00000532932 KIF3BO15066 747 aa18.64■□□□□ 0.58
LTBP3-221ENST00000532932 VSIG10Q8N0Z9 540 aa18.64■□□□□ 0.58
LTBP3-221ENST00000532932 IQGAP1P46940 1657 aa18.64■□□□□ 0.57
LTBP3-221ENST00000532932 HSP90AB1P08238 724 aaKnown RBP18.64■□□□□ 0.57
LTBP3-221ENST00000532932 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
LTBP3-221ENST00000532932 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
LTBP3-221ENST00000532932 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
LTBP3-221ENST00000532932 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
LTBP3-221ENST00000532932 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
LTBP3-221ENST00000532932 EXOSC9Q06265 439 aaKnown RBP18.62■□□□□ 0.57
LTBP3-221ENST00000532932 STAC3Q96MF2 364 aa18.62■□□□□ 0.57
LTBP3-221ENST00000532932 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.62■□□□□ 0.57
LTBP3-221ENST00000532932 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
LTBP3-221ENST00000532932 LNPKQ9C0E8 428 aa18.61■□□□□ 0.57
LTBP3-221ENST00000532932 KDM5AP29375 1690 aaKnown RBP18.61■□□□□ 0.57
LTBP3-221ENST00000532932 ESPNB1AK53 854 aa18.61■□□□□ 0.57
LTBP3-221ENST00000532932 MYOM1P52179 1685 aa18.6■□□□□ 0.57
LTBP3-221ENST00000532932 TRIM27P14373 513 aa18.6■□□□□ 0.57
LTBP3-221ENST00000532932 TMEM132EQ6IEE7 984 aa18.59■□□□□ 0.57
LTBP3-221ENST00000532932 SSH1Q8WYL5 1049 aa18.59■□□□□ 0.57
LTBP3-221ENST00000532932 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.57
LTBP3-221ENST00000532932 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
LTBP3-221ENST00000532932 PLXNC1O60486 1568 aa18.57■□□□□ 0.56
LTBP3-221ENST00000532932 KANK1Q14678 1352 aa18.57■□□□□ 0.56
LTBP3-221ENST00000532932 DDX19BQ9UMR2 479 aa18.57■□□□□ 0.56
LTBP3-221ENST00000532932 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
LTBP3-221ENST00000532932 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
LTBP3-221ENST00000532932 GAS2L3Q86XJ1 694 aa18.56■□□□□ 0.56
LTBP3-221ENST00000532932 SAFB2Q14151 953 aaKnown RBP eCLIP18.56■□□□□ 0.56
LTBP3-221ENST00000532932 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
LTBP3-221ENST00000532932 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
LTBP3-221ENST00000532932 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
LTBP3-221ENST00000532932 PKNOX2Q96KN3 472 aa18.54■□□□□ 0.56
LTBP3-221ENST00000532932 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
LTBP3-221ENST00000532932 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-221ENST00000532932 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
LTBP3-221ENST00000532932 NUTM2DQ5VT03 806 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-221ENST00000532932 HDAC1Q13547 482 aaPredicted RBP18.53■□□□□ 0.56
LTBP3-221ENST00000532932 RTEL1-TNFRSF6BF6WH68 1400 aa18.53■□□□□ 0.56
LTBP3-221ENST00000532932 TRPM2O94759 1503 aa18.53■□□□□ 0.56
LTBP3-221ENST00000532932 CCDC27Q2M243 656 aa18.52■□□□□ 0.56
LTBP3-221ENST00000532932 UGGT1Q9NYU2 1555 aa18.52■□□□□ 0.56
LTBP3-221ENST00000532932 CEP152O94986 1710 aa18.52■□□□□ 0.55
LTBP3-221ENST00000532932 SPHKAPQ2M3C7 1700 aa18.51■□□□□ 0.55
LTBP3-221ENST00000532932 PTPRTO14522 1441 aa18.51■□□□□ 0.55
LTBP3-221ENST00000532932 ANKRD45Q5TZF3 282 aa18.51■□□□□ 0.55
LTBP3-221ENST00000532932 SMC5Q8IY18 1101 aa18.51■□□□□ 0.55
LTBP3-221ENST00000532932 PLCH2O75038 1416 aa18.5■□□□□ 0.55
LTBP3-221ENST00000532932 RRP9O43818 475 aaKnown RBP18.5■□□□□ 0.55
LTBP3-221ENST00000532932 RBM42Q9BTD8 480 aaKnown RBP18.5■□□□□ 0.55
LTBP3-221ENST00000532932 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
LTBP3-221ENST00000532932 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
LTBP3-221ENST00000532932 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
LTBP3-221ENST00000532932 ZMYND15Q9H091 742 aa18.49■□□□□ 0.55
LTBP3-221ENST00000532932 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
LTBP3-221ENST00000532932 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
LTBP3-221ENST00000532932 CD2BP2O95400 341 aaKnown RBP18.48■□□□□ 0.55
LTBP3-221ENST00000532932 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
LTBP3-221ENST00000532932 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
LTBP3-221ENST00000532932 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
LTBP3-221ENST00000532932 SSFA2P28290 1259 aa18.47■□□□□ 0.55
LTBP3-221ENST00000532932 RIPK4P57078 832 aa18.47■□□□□ 0.55
LTBP3-221ENST00000532932 ANP32BQ92688 251 aaKnown RBP18.47■□□□□ 0.55
LTBP3-221ENST00000532932 RBM25P49756 843 aaKnown RBP18.46■□□□□ 0.55
LTBP3-221ENST00000532932 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 IPO8O15397 1037 aaKnown RBP18.46■□□□□ 0.55
LTBP3-221ENST00000532932 NUCB1Q02818 461 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 NOS1P29475 1434 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 GGT6Q6P531 493 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 SNX21Q969T3 373 aa18.46■□□□□ 0.55
LTBP3-221ENST00000532932 ISY1Q9ULR0 285 aaKnown RBP18.46■□□□□ 0.55
LTBP3-221ENST00000532932 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
LTBP3-221ENST00000532932 SKOR2Q2VWA4 1001 aaPredicted RBP18.45■□□□□ 0.54
LTBP3-221ENST00000532932 ZNF518AQ6AHZ1 1483 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms