RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 HSPA5P11021 654 aaKnown RBP20.17■□□□□ 0.82
COL16A1-217ENST00000532877 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
COL16A1-217ENST00000532877 PHLPP1O60346 1717 aa20.15■□□□□ 0.82
COL16A1-217ENST00000532877 QRICH2Q9H0J4 1663 aa20.14■□□□□ 0.81
COL16A1-217ENST00000532877 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
COL16A1-217ENST00000532877 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
COL16A1-217ENST00000532877 NKTRP30414 1462 aaKnown RBP20.13■□□□□ 0.81
COL16A1-217ENST00000532877 KCNA6P17658 529 aa20.13■□□□□ 0.81
COL16A1-217ENST00000532877 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
COL16A1-217ENST00000532877 ST20-MTHFSA0A0A6YYL1 179 aa20.12■□□□□ 0.81
COL16A1-217ENST00000532877 CENPJQ9HC77 1338 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-217ENST00000532877 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-217ENST00000532877 PRAM1Q96QH2 718 aa20.1■□□□□ 0.81
COL16A1-217ENST00000532877 PLEKHH1Q9ULM0 1364 aa20.09■□□□□ 0.81
COL16A1-217ENST00000532877 SIRT1Q96EB6 747 aa20.09■□□□□ 0.81
COL16A1-217ENST00000532877 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.81
COL16A1-217ENST00000532877 LRP6O75581 1613 aa20.07■□□□□ 0.8
COL16A1-217ENST00000532877 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
COL16A1-217ENST00000532877 TESK2Q96S53 571 aa20.07■□□□□ 0.8
COL16A1-217ENST00000532877 JCADQ9P266 1359 aa20.07■□□□□ 0.8
COL16A1-217ENST00000532877 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
COL16A1-217ENST00000532877 POGKQ9P215 609 aa20.06■□□□□ 0.8
COL16A1-217ENST00000532877 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
COL16A1-217ENST00000532877 UPF1Q92900 1129 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL16A1-217ENST00000532877 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
COL16A1-217ENST00000532877 PROSER2Q86WR7 435 aaPredicted RBP20.03■□□□□ 0.8
COL16A1-217ENST00000532877 RBM33Q96EV2 1170 aaKnown RBP20.03■□□□□ 0.8
COL16A1-217ENST00000532877 ADGRB2O60241 1585 aa20.03■□□□□ 0.8
COL16A1-217ENST00000532877 TULP4Q9NRJ4 1543 aa20.02■□□□□ 0.8
COL16A1-217ENST00000532877 NALCNQ8IZF0 1738 aa20.02■□□□□ 0.8
COL16A1-217ENST00000532877 SLAIN2Q9P270 581 aa20.01■□□□□ 0.79
COL16A1-217ENST00000532877 MINK1Q8N4C8 1332 aaPredicted RBP20.01■□□□□ 0.79
COL16A1-217ENST00000532877 SRCAPQ6ZRS2 3230 aa20■□□□□ 0.79
COL16A1-217ENST00000532877 ZNF316A6NFI3 1004 aaPredicted RBP20■□□□□ 0.79
COL16A1-217ENST00000532877 AHDC1Q5TGY3 1603 aaPredicted RBP20■□□□□ 0.79
COL16A1-217ENST00000532877 MSH6P52701 1360 aa19.99■□□□□ 0.79
COL16A1-217ENST00000532877 TMF1P82094 1093 aa19.98■□□□□ 0.79
COL16A1-217ENST00000532877 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
COL16A1-217ENST00000532877 NCOA3Q9Y6Q9 1424 aa19.97■□□□□ 0.79
COL16A1-217ENST00000532877 C11orf95C9JLR9 678 aaPredicted RBP19.97■□□□□ 0.79
COL16A1-217ENST00000532877 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
COL16A1-217ENST00000532877 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
COL16A1-217ENST00000532877 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
COL16A1-217ENST00000532877 CDK12Q9NYV4 1490 aaPredicted RBP19.95■□□□□ 0.78
COL16A1-217ENST00000532877 KIF7Q2M1P5 1343 aa19.95■□□□□ 0.78
COL16A1-217ENST00000532877 EVC2Q86UK5 1308 aa19.95■□□□□ 0.78
COL16A1-217ENST00000532877 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
COL16A1-217ENST00000532877 WASHC2AQ641Q2 1341 aa19.94■□□□□ 0.78
COL16A1-217ENST00000532877 FMN2Q9NZ56 1722 aa19.92■□□□□ 0.78
COL16A1-217ENST00000532877 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
COL16A1-217ENST00000532877 CDCA8Q53HL2 280 aa19.91■□□□□ 0.78
COL16A1-217ENST00000532877 ZNF772Q68DY9 489 aaPredicted RBP19.91■□□□□ 0.78
COL16A1-217ENST00000532877 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
COL16A1-217ENST00000532877 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
COL16A1-217ENST00000532877 MYOM1P52179 1685 aa19.9■□□□□ 0.78
COL16A1-217ENST00000532877 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
COL16A1-217ENST00000532877 ATP7BP35670 1465 aa19.88■□□□□ 0.77
COL16A1-217ENST00000532877 DCCP43146 1447 aa19.88■□□□□ 0.77
COL16A1-217ENST00000532877 SRPK2P78362 688 aaKnown RBP19.88■□□□□ 0.77
COL16A1-217ENST00000532877 CABP2Q9NPB3 220 aa19.88■□□□□ 0.77
COL16A1-217ENST00000532877 PUS7Q96PZ0 661 aaKnown RBP19.87■□□□□ 0.77
COL16A1-217ENST00000532877 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
COL16A1-217ENST00000532877 TOPAZ1Q8N9V7 1692 aa19.87■□□□□ 0.77
COL16A1-217ENST00000532877 ATAD2Q6PL18 1390 aa19.86■□□□□ 0.77
COL16A1-217ENST00000532877 C19orf44Q9H6X5 657 aa19.86■□□□□ 0.77
COL16A1-217ENST00000532877 NHSL1Q5SYE7 1610 aa19.85■□□□□ 0.77
COL16A1-217ENST00000532877 ITSN1Q15811 1721 aa19.85■□□□□ 0.77
COL16A1-217ENST00000532877 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
COL16A1-217ENST00000532877 PRR36Q9H6K5 1346 aa19.84■□□□□ 0.77
COL16A1-217ENST00000532877 RGPD8O14715 1765 aaPredicted RBP19.83■□□□□ 0.77
COL16A1-217ENST00000532877 RXRBP28702 533 aa19.82■□□□□ 0.76
COL16A1-217ENST00000532877 NUTM2FA1L443 756 aa19.81■□□□□ 0.76
COL16A1-217ENST00000532877 NUDT16Q96DE0 195 aaKnown RBP19.81■□□□□ 0.76
COL16A1-217ENST00000532877 NINLQ9Y2I6 1382 aa19.81■□□□□ 0.76
COL16A1-217ENST00000532877 MST1RQ04912 1400 aa19.8■□□□□ 0.76
COL16A1-217ENST00000532877 ATF3P18847 181 aa19.8■□□□□ 0.76
COL16A1-217ENST00000532877 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
COL16A1-217ENST00000532877 PPIP5K1Q6PFW1 1433 aa19.79■□□□□ 0.76
COL16A1-217ENST00000532877 RGS12O14924 1447 aa19.78■□□□□ 0.76
COL16A1-217ENST00000532877 BRINP3Q76B58 766 aa19.78■□□□□ 0.76
COL16A1-217ENST00000532877 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
COL16A1-217ENST00000532877 C1orf167Q5SNV9 1468 aa19.78■□□□□ 0.76
COL16A1-217ENST00000532877 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.76
COL16A1-217ENST00000532877 TMC1Q8TDI8 760 aa19.77■□□□□ 0.76
COL16A1-217ENST00000532877 DDX10Q13206 875 aaKnown RBP19.76■□□□□ 0.75
COL16A1-217ENST00000532877 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
COL16A1-217ENST00000532877 CD163L1Q9NR16 1453 aa19.75■□□□□ 0.75
COL16A1-217ENST00000532877 CABP1Q9NZU7 370 aa19.75■□□□□ 0.75
COL16A1-217ENST00000532877 AFF2P51816 1311 aa19.75■□□□□ 0.75
COL16A1-217ENST00000532877 AKAP12Q02952 1782 aa19.74■□□□□ 0.75
COL16A1-217ENST00000532877 EP400Q96L91 3159 aa19.74■□□□□ 0.75
COL16A1-217ENST00000532877 ANKRD36BQ8N2N9 1353 aa19.73■□□□□ 0.75
COL16A1-217ENST00000532877 KIF1AQ12756 1690 aa19.73■□□□□ 0.75
COL16A1-217ENST00000532877 A0A1W2PP64 1363 aa19.72■□□□□ 0.75
COL16A1-217ENST00000532877 MON2Q7Z3U7 1717 aa19.71■□□□□ 0.75
COL16A1-217ENST00000532877 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
COL16A1-217ENST00000532877 PANK3Q9H999 370 aa19.71■□□□□ 0.75
COL16A1-217ENST00000532877 CPSF1Q10570 1443 aaKnown RBP19.7■□□□□ 0.74
COL16A1-217ENST00000532877 ESCO1Q5FWF5 840 aa19.7■□□□□ 0.74
COL16A1-217ENST00000532877 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms