RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TPM2P07951 284 aa10.74□□□□□ -0.69
CTNND1-232ENST00000532649 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
CTNND1-232ENST00000532649 CRBNQ96SW2 442 aa10.74□□□□□ -0.69
CTNND1-232ENST00000532649 API5Q9BZZ5 524 aaKnown RBP10.74□□□□□ -0.69
CTNND1-232ENST00000532649 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-232ENST00000532649 STRN4Q9NRL3 753 aa10.73□□□□□ -0.69
CTNND1-232ENST00000532649 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
CTNND1-232ENST00000532649 RBM19Q9Y4C8 960 aaKnown RBP10.73□□□□□ -0.69
CTNND1-232ENST00000532649 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
CTNND1-232ENST00000532649 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
CTNND1-232ENST00000532649 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
CTNND1-232ENST00000532649 NBPF8Q3BBV2 869 aa10.72□□□□□ -0.69
CTNND1-232ENST00000532649 GBP4Q96PP9 640 aa10.72□□□□□ -0.69
CTNND1-232ENST00000532649 RTEL1-TNFRSF6BF6WH68 1400 aa10.72□□□□□ -0.69
CTNND1-232ENST00000532649 TPD52L1Q16890 204 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-232ENST00000532649 DDX19BQ9UMR2 479 aa10.72□□□□□ -0.69
CTNND1-232ENST00000532649 CENPQQ7L2Z9 268 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-232ENST00000532649 AMOTL1Q8IY63 956 aa10.72□□□□□ -0.69
CTNND1-232ENST00000532649 DZIP1LQ8IYY4 767 aaKnown RBP10.72□□□□□ -0.69
CTNND1-232ENST00000532649 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
CTNND1-232ENST00000532649 PHF23Q9BUL5 403 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-232ENST00000532649 ANKRD30BQ9BXX2 1392 aa10.71□□□□□ -0.69
CTNND1-232ENST00000532649 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
CTNND1-232ENST00000532649 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
CTNND1-232ENST00000532649 AIMP1Q12904 312 aaKnown RBP10.71□□□□□ -0.69
CTNND1-232ENST00000532649 BIVM-ERCC5R4GMW8 1640 aa10.71□□□□□ -0.7
CTNND1-232ENST00000532649 ROCK1Q13464 1354 aa10.71□□□□□ -0.7
CTNND1-232ENST00000532649 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.7
CTNND1-232ENST00000532649 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.7
CTNND1-232ENST00000532649 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 NUTM2BA6NNL0 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-232ENST00000532649 NUTM2EB1AL46 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-232ENST00000532649 RIC3Q7Z5B4 369 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 NUTM2AQ8IVF1 878 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-232ENST00000532649 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.7□□□□□ -0.71e-6■■■■■ 38.5
CTNND1-232ENST00000532649 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 PRKAR2BP31323 418 aa10.7□□□□□ -0.7
CTNND1-232ENST00000532649 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-232ENST00000532649 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
CTNND1-232ENST00000532649 BRD4O60885 1362 aaPredicted RBP10.69□□□□□ -0.7
CTNND1-232ENST00000532649 RAD21O60216 631 aa10.69□□□□□ -0.7
CTNND1-232ENST00000532649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
CTNND1-232ENST00000532649 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
CTNND1-232ENST00000532649 NAIPQ13075 1403 aa10.69□□□□□ -0.7
CTNND1-232ENST00000532649 IFIT2P09913 472 aaKnown RBP10.68□□□□□ -0.7
CTNND1-232ENST00000532649 ARID3AQ99856 593 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 PIP4K2BP78356 416 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 VPS37DQ86XT2 251 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 KLHL34Q8N239 644 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 ST18O60284 1047 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 DIAPH3Q9NSV4 1193 aa10.68□□□□□ -0.7
CTNND1-232ENST00000532649 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
CTNND1-232ENST00000532649 AKAP17AQ02040 695 aaKnown RBP10.68□□□□□ -0.7
CTNND1-232ENST00000532649 G3BP1Q13283 466 aaKnown RBP eCLIP10.68□□□□□ -0.78e-9■□□□□ 11.1
CTNND1-232ENST00000532649 ABCC5O15440 1437 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-232ENST00000532649 CCDC70Q6NSX1 233 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 TOM1L2Q6ZVM7 507 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 FANCAO15360 1455 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 PATL2C9JE40 543 aaKnown RBP10.67□□□□□ -0.7
CTNND1-232ENST00000532649 LRRFIP1Q32MZ4 808 aaKnown RBP10.67□□□□□ -0.7
CTNND1-232ENST00000532649 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 KIF3AQ9Y496 699 aa10.67□□□□□ -0.7
CTNND1-232ENST00000532649 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
CTNND1-232ENST00000532649 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-232ENST00000532649 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
CTNND1-232ENST00000532649 SF3A1Q15459 793 aaKnown RBP10.66□□□□□ -0.7
CTNND1-232ENST00000532649 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
CTNND1-232ENST00000532649 CEBPAP49715 358 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-232ENST00000532649 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-232ENST00000532649 TPM1P09493 284 aa10.65□□□□□ -0.71
CTNND1-232ENST00000532649 PRDM11Q9NQV5 511 aa10.65□□□□□ -0.71
CTNND1-232ENST00000532649 CCDC43Q96MW1 224 aaKnown RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 RBM33Q96EV2 1170 aaKnown RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
CTNND1-232ENST00000532649 RRP12Q5JTH9 1297 aaKnown RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 CCDC30Q5VVM6 783 aa10.64□□□□□ -0.71
CTNND1-232ENST00000532649 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 GZF1Q9H116 711 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-232ENST00000532649 WAPLQ7Z5K2 1190 aa10.64□□□□□ -0.71
CTNND1-232ENST00000532649 APPP05067 770 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 UBTFL1P0CB47 393 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-232ENST00000532649 CCDC47Q96A33 483 aaKnown RBP10.63□□□□□ -0.71
CTNND1-232ENST00000532649 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
CTNND1-232ENST00000532649 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 FAM177BA6PVY3 158 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 HSP90AB4PQ58FF6 505 aa10.63□□□□□ -0.71
CTNND1-232ENST00000532649 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-232ENST00000532649 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-232ENST00000532649 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-232ENST00000532649 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-232ENST00000532649 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms