RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CLCN1P35523 988 aa8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 DDX17Q92841 729 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 TCOF1Q13428 1488 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
TGFBR3-209ENST00000532540 ITSN2Q9NZM3 1697 aa8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 DUOX2Q9NRD8 1548 aa8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 AAMPQ13685 434 aa8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 WDR43Q15061 677 aaKnown RBP eCLIP8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 DIP2BQ9P265 1576 aa8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 MYO5CQ9NQX4 1742 aa8.54□□□□□ -1.04
TGFBR3-209ENST00000532540 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 RRP1P56182 461 aaKnown RBP8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 NPATQ14207 1427 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 ABCC1P33527 1531 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 UBAP1LF5GYI3 381 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 UGGT1Q9NYU2 1555 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 MAPKBP1O60336 1514 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 PTMSP20962 102 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 GBP4Q96PP9 640 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 PRKRIP1Q9H875 184 aaPredicted RBP8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 LRRIQ1Q96JM4 1722 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 FAM135AQ9P2D6 1515 aa8.53□□□□□ -1.04
TGFBR3-209ENST00000532540 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.04
TGFBR3-209ENST00000532540 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.04
TGFBR3-209ENST00000532540 R3HCC1Q9Y3T6 440 aaKnown RBP8.52□□□□□ -1.04
TGFBR3-209ENST00000532540 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
TGFBR3-209ENST00000532540 NLRP6P59044 892 aa8.52□□□□□ -1.05
TGFBR3-209ENST00000532540 CHAF1AQ13111 956 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-209ENST00000532540 HSCBQ8IWL3 235 aa8.52□□□□□ -1.05
TGFBR3-209ENST00000532540 ZHX1Q9UKY1 873 aaPredicted RBP8.52□□□□□ -1.05
TGFBR3-209ENST00000532540 RRAGDQ9NQL2 400 aaPredicted RBP8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 ZC3H6P61129 1189 aaKnown RBP8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 KIF7Q2M1P5 1343 aa8.51□□□□□ -1.05
TGFBR3-209ENST00000532540 ZNF771Q7L3S4 317 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 PZPP20742 1482 aa8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 CDC42BPAQ5VT25 1732 aa8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 AMPHP49418 695 aa8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 DNMT1P26358 1616 aaKnown RBP8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 ZNF335Q9H4Z2 1342 aaPredicted RBP8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 RIMS2Q9UQ26 1411 aa8.5□□□□□ -1.05
TGFBR3-209ENST00000532540 CSPP1Q1MSJ5 1256 aa8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 CCDC146Q8IYE0 955 aa8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 CABLES1Q8TDN4 633 aa8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 MLH3Q9UHC1 1453 aa8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
TGFBR3-209ENST00000532540 U2AF1L5P0DN76 240 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 U2AF1Q01081 240 aaKnown RBP eCLIP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 NUDT16Q96DE0 195 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 PREX2Q70Z35 1606 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 KIAA2012Q0VF49 1180 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 NAP1L2Q9ULW6 460 aaPredicted RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 MEX3CQ5U5Q3 659 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 ORAI2Q96SN7 254 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 C14orf93Q9H972 538 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 ISY1Q9ULR0 285 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 CDC42BPBQ9Y5S2 1711 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
TGFBR3-209ENST00000532540 PDE3BQ13370 1112 aa8.47□□□□□ -1.05
TGFBR3-209ENST00000532540 RRS1Q15050 365 aaKnown RBP8.47□□□□□ -1.05
TGFBR3-209ENST00000532540 TRAK2O60296 914 aa8.47□□□□□ -1.05
TGFBR3-209ENST00000532540 ABCA9Q8IUA7 1624 aa8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 EVA1CP58658 441 aa8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 SKOR2Q2VWA4 1001 aaPredicted RBP8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 TAF3Q5VWG9 929 aa8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 ZRANB1Q9UGI0 708 aa8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 RPGRIP1LQ68CZ1 1315 aa8.46□□□□□ -1.05
TGFBR3-209ENST00000532540 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 COG3Q96JB2 828 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 GRPEL1Q9HAV7 217 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 SHANK2Q9UPX8 1470 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 CFAP53Q96M91 514 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 CHMP5Q9NZZ3 219 aa8.46□□□□□ -1.06
TGFBR3-209ENST00000532540 HMOX1P09601 288 aa8.45□□□□□ -1.06
TGFBR3-209ENST00000532540 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
TGFBR3-209ENST00000532540 NME9Q86XW9 330 aa8.45□□□□□ -1.06
TGFBR3-209ENST00000532540 HECW2Q9P2P5 1572 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 SMG6Q86US8 1419 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 UQCRHLA0A096LP55 91 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 UQCRHP07919 91 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 CRBNQ96SW2 442 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 ADGRL2O95490 1459 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 APPP05067 770 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 DMRT2Q9Y5R5 561 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 TMEM2Q9UHN6 1383 aa8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 SMAP1Q8IYB5 467 aaPredicted RBP8.44□□□□□ -1.06
TGFBR3-209ENST00000532540 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
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