RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 POGKQ9P215 609 aa25.18■■□□□ 1.62
PPP1CA-208ENST00000532446 SAFB2Q14151 953 aaKnown RBP eCLIP25.15■■□□□ 1.62
PPP1CA-208ENST00000532446 NKTRP30414 1462 aaKnown RBP25.14■■□□□ 1.62
PPP1CA-208ENST00000532446 SLC24A1O60721 1099 aa25.14■■□□□ 1.61
PPP1CA-208ENST00000532446 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.12■■□□□ 1.61
PPP1CA-208ENST00000532446 C11orf95C9JLR9 678 aaPredicted RBP25.12■■□□□ 1.61
PPP1CA-208ENST00000532446 DISP3Q9P2K9 1392 aa25.1■■□□□ 1.61
PPP1CA-208ENST00000532446 TMF1P82094 1093 aa25.1■■□□□ 1.61
PPP1CA-208ENST00000532446 MINK1Q8N4C8 1332 aaPredicted RBP25.1■■□□□ 1.61
PPP1CA-208ENST00000532446 TULP4Q9NRJ4 1543 aa25.08■■□□□ 1.61
PPP1CA-208ENST00000532446 ADGRB2O60241 1585 aa25.07■■□□□ 1.6
PPP1CA-208ENST00000532446 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
PPP1CA-208ENST00000532446 KIF7Q2M1P5 1343 aa25.06■■□□□ 1.6
PPP1CA-208ENST00000532446 CCDC7Q96M83 1385 aa25.06■■□□□ 1.6
PPP1CA-208ENST00000532446 PROSER2Q86WR7 435 aaPredicted RBP25.05■■□□□ 1.6
PPP1CA-208ENST00000532446 NALCNQ8IZF0 1738 aa25.05■■□□□ 1.6
PPP1CA-208ENST00000532446 EVC2Q86UK5 1308 aa25.05■■□□□ 1.6
PPP1CA-208ENST00000532446 CDCA8Q53HL2 280 aa25.02■■□□□ 1.6
PPP1CA-208ENST00000532446 NCOA3Q9Y6Q9 1424 aa25.01■■□□□ 1.59
PPP1CA-208ENST00000532446 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
PPP1CA-208ENST00000532446 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
PPP1CA-208ENST00000532446 ADGRL3Q9HAR2 1447 aa25■■□□□ 1.59
PPP1CA-208ENST00000532446 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
PPP1CA-208ENST00000532446 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
PPP1CA-208ENST00000532446 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
PPP1CA-208ENST00000532446 LRRC7Q96NW7 1537 aa24.99■■□□□ 1.59
PPP1CA-208ENST00000532446 CDK19Q9BWU1 502 aa24.99■■□□□ 1.59
PPP1CA-208ENST00000532446 UBAP1LF5GYI3 381 aa24.97■■□□□ 1.59
PPP1CA-208ENST00000532446 CDC42BPGQ6DT37 1551 aa24.97■■□□□ 1.59
PPP1CA-208ENST00000532446 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
PPP1CA-208ENST00000532446 CABP2Q9NPB3 220 aa24.96■■□□□ 1.59
PPP1CA-208ENST00000532446 SRPK2P78362 688 aaKnown RBP24.95■■□□□ 1.58
PPP1CA-208ENST00000532446 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
PPP1CA-208ENST00000532446 MYOM1P52179 1685 aa24.93■■□□□ 1.58
PPP1CA-208ENST00000532446 C14orf37Q86TY3 774 aa24.93■■□□□ 1.58
PPP1CA-208ENST00000532446 C19orf44Q9H6X5 657 aa24.91■■□□□ 1.58
PPP1CA-208ENST00000532446 ATAD2Q6PL18 1390 aa24.91■■□□□ 1.58
PPP1CA-208ENST00000532446 USP32Q8NFA0 1604 aa24.89■■□□□ 1.58
PPP1CA-208ENST00000532446 ATP7BP35670 1465 aa24.89■■□□□ 1.57
PPP1CA-208ENST00000532446 DCCP43146 1447 aa24.89■■□□□ 1.57
PPP1CA-208ENST00000532446 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
PPP1CA-208ENST00000532446 PRR36Q9H6K5 1346 aa24.88■■□□□ 1.57
PPP1CA-208ENST00000532446 NUDT16Q96DE0 195 aaKnown RBP24.88■■□□□ 1.57
PPP1CA-208ENST00000532446 RGPD8O14715 1765 aaPredicted RBP24.87■■□□□ 1.57
PPP1CA-208ENST00000532446 ANKARQ7Z5J8 1434 aa24.87■■□□□ 1.57
PPP1CA-208ENST00000532446 MSH6P52701 1360 aa24.86■■□□□ 1.57
PPP1CA-208ENST00000532446 TOM1O60784 492 aa24.86■■□□□ 1.57
PPP1CA-208ENST00000532446 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
PPP1CA-208ENST00000532446 NINLQ9Y2I6 1382 aa24.85■■□□□ 1.57
PPP1CA-208ENST00000532446 ITSN1Q15811 1721 aa24.85■■□□□ 1.57
PPP1CA-208ENST00000532446 CCDC61Q9Y6R9 512 aa24.84■■□□□ 1.57
PPP1CA-208ENST00000532446 NUTM2FA1L443 756 aa24.83■■□□□ 1.57
PPP1CA-208ENST00000532446 SLC12A5Q9H2X9 1139 aa24.83■■□□□ 1.57
PPP1CA-208ENST00000532446 ATF3P18847 181 aa24.82■■□□□ 1.56
PPP1CA-208ENST00000532446 TMC1Q8TDI8 760 aa24.82■■□□□ 1.56
PPP1CA-208ENST00000532446 PPIP5K1Q6PFW1 1433 aa24.81■■□□□ 1.56
PPP1CA-208ENST00000532446 CADPS2Q86UW7 1296 aa24.81■■□□□ 1.56
PPP1CA-208ENST00000532446 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
PPP1CA-208ENST00000532446 MST1RQ04912 1400 aa24.79■■□□□ 1.56
PPP1CA-208ENST00000532446 PANK3Q9H999 370 aa24.78■■□□□ 1.56
PPP1CA-208ENST00000532446 PIP4K2BP78356 416 aa24.77■■□□□ 1.56
PPP1CA-208ENST00000532446 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
PPP1CA-208ENST00000532446 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
PPP1CA-208ENST00000532446 CD163L1Q9NR16 1453 aa24.77■■□□□ 1.56
PPP1CA-208ENST00000532446 PLEKHG3A1L390 1219 aa24.77■■□□□ 1.56
PPP1CA-208ENST00000532446 ANKRD36BQ8N2N9 1353 aa24.76■■□□□ 1.55
PPP1CA-208ENST00000532446 AKAP12Q02952 1782 aa24.74■■□□□ 1.55
PPP1CA-208ENST00000532446 TERF2IPQ9NYB0 399 aa24.73■■□□□ 1.55
PPP1CA-208ENST00000532446 A0A1W2PP64 1363 aa24.73■■□□□ 1.55
PPP1CA-208ENST00000532446 CPSF1Q10570 1443 aaKnown RBP24.73■■□□□ 1.55
PPP1CA-208ENST00000532446 PER1O15534 1290 aaPredicted RBP24.71■■□□□ 1.55
PPP1CA-208ENST00000532446 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
PPP1CA-208ENST00000532446 ESCO1Q5FWF5 840 aa24.7■■□□□ 1.55
PPP1CA-208ENST00000532446 HDGFL2Q7Z4V5 671 aaPredicted RBP24.7■■□□□ 1.55
PPP1CA-208ENST00000532446 CARD14Q9BXL6 1004 aa24.7■■□□□ 1.55
PPP1CA-208ENST00000532446 PHF8Q9UPP1 1060 aa24.7■■□□□ 1.55
PPP1CA-208ENST00000532446 POLR3AO14802 1390 aaPredicted RBP24.7■■□□□ 1.55
PPP1CA-208ENST00000532446 MON2Q7Z3U7 1717 aa24.7■■□□□ 1.54
PPP1CA-208ENST00000532446 PMFBP1Q8TBY8 1022 aa24.7■■□□□ 1.54
PPP1CA-208ENST00000532446 ORAI2Q96SN7 254 aa24.7■■□□□ 1.54
PPP1CA-208ENST00000532446 ACEP12821 1306 aa24.7■■□□□ 1.54
PPP1CA-208ENST00000532446 KIF1AQ12756 1690 aa24.69■■□□□ 1.54
PPP1CA-208ENST00000532446 HSPA1LP34931 641 aa24.69■■□□□ 1.54
PPP1CA-208ENST00000532446 SLAIN2Q9P270 581 aa24.69■■□□□ 1.54
PPP1CA-208ENST00000532446 ZNF692Q9BU19 519 aaPredicted RBP24.67■■□□□ 1.54
PPP1CA-208ENST00000532446 NSD3Q9BZ95 1437 aa24.66■■□□□ 1.54
PPP1CA-208ENST00000532446 KTN1Q86UP2 1357 aaKnown RBP24.66■■□□□ 1.54
PPP1CA-208ENST00000532446 NGDNQ8NEJ9 315 aaKnown RBP24.65■■□□□ 1.54
PPP1CA-208ENST00000532446 KNSTRNQ9Y448 316 aa24.64■■□□□ 1.54
PPP1CA-208ENST00000532446 USP6P35125 1406 aa24.63■■□□□ 1.53
PPP1CA-208ENST00000532446 EDC4Q6P2E9 1401 aaKnown RBP24.63■■□□□ 1.53
PPP1CA-208ENST00000532446 NRKQ7Z2Y5 1582 aa24.62■■□□□ 1.53
PPP1CA-208ENST00000532446 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
PPP1CA-208ENST00000532446 SSH2Q76I76 1423 aa24.6■■□□□ 1.53
PPP1CA-208ENST00000532446 AMER1Q5JTC6 1135 aaPredicted RBP24.6■■□□□ 1.53
PPP1CA-208ENST00000532446 NPC1L1Q9UHC9 1359 aa24.59■■□□□ 1.53
PPP1CA-208ENST00000532446 FOXO3O43524 673 aa24.58■■□□□ 1.53
PPP1CA-208ENST00000532446 CGNL1Q0VF96 1302 aa24.57■■□□□ 1.52
PPP1CA-208ENST00000532446 BRD4O60885 1362 aaPredicted RBP24.57■■□□□ 1.52
PPP1CA-208ENST00000532446 KIF20BQ96Q89 1820 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms