RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 HSPA2P54652 639 aa15.7■□□□□ 0.1
SMPD1-207ENST00000532367 CHD2O14647 1828 aaKnown RBP15.69■□□□□ 0.1
SMPD1-207ENST00000532367 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
SMPD1-207ENST00000532367 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
SMPD1-207ENST00000532367 ANP32CO43423 234 aa15.68■□□□□ 0.1
SMPD1-207ENST00000532367 MIER1Q8N108 512 aa15.68■□□□□ 0.1
SMPD1-207ENST00000532367 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
SMPD1-207ENST00000532367 TULP4Q9NRJ4 1543 aa15.68■□□□□ 0.1
SMPD1-207ENST00000532367 PTCH1Q13635 1447 aa15.68■□□□□ 0.1
SMPD1-207ENST00000532367 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
SMPD1-207ENST00000532367 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
SMPD1-207ENST00000532367 KCNA6P17658 529 aa15.65■□□□□ 0.1
SMPD1-207ENST00000532367 PANK3Q9H999 370 aa15.65■□□□□ 0.1
SMPD1-207ENST00000532367 CABP2Q9NPB3 220 aa15.64■□□□□ 0.09
SMPD1-207ENST00000532367 MYOM1P52179 1685 aa15.63■□□□□ 0.09
SMPD1-207ENST00000532367 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
SMPD1-207ENST00000532367 WASLO00401 505 aaPredicted RBP15.63■□□□□ 0.09
SMPD1-207ENST00000532367 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
SMPD1-207ENST00000532367 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
SMPD1-207ENST00000532367 TMC1Q8TDI8 760 aa15.62■□□□□ 0.09
SMPD1-207ENST00000532367 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
SMPD1-207ENST00000532367 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
SMPD1-207ENST00000532367 ADGRB2O60241 1585 aa15.61■□□□□ 0.09
SMPD1-207ENST00000532367 NWD1Q149M9 1564 aa15.6■□□□□ 0.09
SMPD1-207ENST00000532367 SLC12A5Q9H2X9 1139 aa15.59■□□□□ 0.09
SMPD1-207ENST00000532367 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
SMPD1-207ENST00000532367 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
SMPD1-207ENST00000532367 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
SMPD1-207ENST00000532367 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
SMPD1-207ENST00000532367 NKTRP30414 1462 aaKnown RBP15.56■□□□□ 0.08
SMPD1-207ENST00000532367 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
SMPD1-207ENST00000532367 ANKRD36BQ8N2N9 1353 aa15.55■□□□□ 0.08
SMPD1-207ENST00000532367 CCER2I3L3R5 266 aa15.55■□□□□ 0.08
SMPD1-207ENST00000532367 PROSER2Q86WR7 435 aaPredicted RBP15.55■□□□□ 0.08
SMPD1-207ENST00000532367 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
SMPD1-207ENST00000532367 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
SMPD1-207ENST00000532367 RALBP1Q15311 655 aa15.54■□□□□ 0.08
SMPD1-207ENST00000532367 CABP1Q9NZU7 370 aa15.54■□□□□ 0.08
SMPD1-207ENST00000532367 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-207ENST00000532367 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
SMPD1-207ENST00000532367 ADGRL3Q9HAR2 1447 aa15.52■□□□□ 0.08
SMPD1-207ENST00000532367 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
SMPD1-207ENST00000532367 NALCNQ8IZF0 1738 aa15.52■□□□□ 0.08
SMPD1-207ENST00000532367 C14orf37Q86TY3 774 aa15.52■□□□□ 0.08
SMPD1-207ENST00000532367 ATP7BP35670 1465 aa15.52■□□□□ 0.07
SMPD1-207ENST00000532367 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
SMPD1-207ENST00000532367 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
SMPD1-207ENST00000532367 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-207ENST00000532367 STRCP1A6NGW2 1772 aa15.51■□□□□ 0.07
SMPD1-207ENST00000532367 NCOA3Q9Y6Q9 1424 aa15.51■□□□□ 0.07
SMPD1-207ENST00000532367 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
SMPD1-207ENST00000532367 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-207ENST00000532367 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
SMPD1-207ENST00000532367 FMN2Q9NZ56 1722 aa15.5■□□□□ 0.07
SMPD1-207ENST00000532367 ANKARQ7Z5J8 1434 aa15.5■□□□□ 0.07
SMPD1-207ENST00000532367 NSD3Q9BZ95 1437 aa15.5■□□□□ 0.07
SMPD1-207ENST00000532367 A0A1W2PP64 1363 aa15.49■□□□□ 0.07
SMPD1-207ENST00000532367 ITSN1Q15811 1721 aa15.49■□□□□ 0.07
SMPD1-207ENST00000532367 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
SMPD1-207ENST00000532367 PLEKHG3A1L390 1219 aa15.49■□□□□ 0.07
SMPD1-207ENST00000532367 RBM33Q96EV2 1170 aaKnown RBP15.49■□□□□ 0.07
SMPD1-207ENST00000532367 ZNF692Q9BU19 519 aaPredicted RBP15.49■□□□□ 0.07
SMPD1-207ENST00000532367 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
SMPD1-207ENST00000532367 TOPAZ1Q8N9V7 1692 aa15.48■□□□□ 0.07
SMPD1-207ENST00000532367 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
SMPD1-207ENST00000532367 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
SMPD1-207ENST00000532367 MSH5O43196 834 aa15.48■□□□□ 0.07
SMPD1-207ENST00000532367 C19orf44Q9H6X5 657 aa15.48■□□□□ 0.07
SMPD1-207ENST00000532367 CGNL1Q0VF96 1302 aa15.47■□□□□ 0.07
SMPD1-207ENST00000532367 TMEM94Q12767 1356 aa15.47■□□□□ 0.07
SMPD1-207ENST00000532367 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
SMPD1-207ENST00000532367 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
SMPD1-207ENST00000532367 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
SMPD1-207ENST00000532367 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
SMPD1-207ENST00000532367 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-207ENST00000532367 NSD2O96028 1365 aa15.45■□□□□ 0.06
SMPD1-207ENST00000532367 ZNF335Q9H4Z2 1342 aaPredicted RBP15.44■□□□□ 0.06
SMPD1-207ENST00000532367 ACEP12821 1306 aa15.43■□□□□ 0.06
SMPD1-207ENST00000532367 ATF3P18847 181 aa15.43■□□□□ 0.06
SMPD1-207ENST00000532367 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
SMPD1-207ENST00000532367 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
SMPD1-207ENST00000532367 EDC4Q6P2E9 1401 aaKnown RBP15.43■□□□□ 0.06
SMPD1-207ENST00000532367 NLRP13Q86W25 1043 aa15.42■□□□□ 0.06
SMPD1-207ENST00000532367 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
SMPD1-207ENST00000532367 DCCP43146 1447 aa15.42■□□□□ 0.06
SMPD1-207ENST00000532367 POLR3AO14802 1390 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-207ENST00000532367 MSH6P52701 1360 aa15.41■□□□□ 0.06
SMPD1-207ENST00000532367 MORC1Q86VD1 984 aa15.41■□□□□ 0.06
SMPD1-207ENST00000532367 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
SMPD1-207ENST00000532367 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
SMPD1-207ENST00000532367 PHF8Q9UPP1 1060 aa15.41■□□□□ 0.06
SMPD1-207ENST00000532367 XIRP1Q702N8 1843 aaKnown RBP15.4■□□□□ 0.06
SMPD1-207ENST00000532367 BRD4O60885 1362 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-207ENST00000532367 FYB1O15117 783 aa15.4■□□□□ 0.06
SMPD1-207ENST00000532367 CADPS2Q86UW7 1296 aa15.4■□□□□ 0.06
SMPD1-207ENST00000532367 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
SMPD1-207ENST00000532367 ADRA2BP18089 450 aa15.39■□□□□ 0.05
SMPD1-207ENST00000532367 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
SMPD1-207ENST00000532367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMPD1-207ENST00000532367 ANKRD26Q9UPS8 1709 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms