RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 FAN1Q9Y2M0 1017 aa7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 NME8Q8N427 588 aa7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 ALG2Q9H553 416 aa7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 LIMD1Q9UGP4 676 aa7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 MAFBQ9Y5Q3 323 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-222ENST00000531967 HDLBPQ00341 1268 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-222ENST00000531967 NLGN1Q8N2Q7 840 aa7.09□□□□□ -1.27
ECHDC1-222ENST00000531967 DHX38Q92620 1227 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-222ENST00000531967 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
ECHDC1-222ENST00000531967 FARP1Q9Y4F1 1045 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-222ENST00000531967 CREB3O43889 395 aa7.09□□□□□ -1.28
ECHDC1-222ENST00000531967 EIF3JO75822 258 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-222ENST00000531967 IBSPP21815 317 aaPredicted RBP7.09□□□□□ -1.28
ECHDC1-222ENST00000531967 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.28
ECHDC1-222ENST00000531967 CHPF2Q9P2E5 772 aa7.09□□□□□ -1.28
ECHDC1-222ENST00000531967 SERPINB4P48594 390 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 C9orf131Q5VYM1 1079 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 PMM1Q92871 262 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 GPHNQ9NQX3 736 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 PPFIA4O75335 1185 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 BACH2Q9BYV9 841 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 NOP58Q9Y2X3 529 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
ECHDC1-222ENST00000531967 SSFA2P28290 1259 aa7.07□□□□□ -1.28
ECHDC1-222ENST00000531967 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-222ENST00000531967 PRKAG2Q9UGJ0 569 aa7.07□□□□□ -1.28
ECHDC1-222ENST00000531967 VAC14Q08AM6 782 aa7.07□□□□□ -1.28
ECHDC1-222ENST00000531967 PIF1Q9H611 641 aa7.07□□□□□ -1.28
ECHDC1-222ENST00000531967 U2SURPO15042 1029 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 CNPY4Q8N129 248 aa7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 RAD51AP2Q09MP3 1159 aa7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 TCEAL1Q15170 157 aa7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 ZNF579Q8NAF0 562 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 TINF2Q9BSI4 451 aa7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 BRINP2Q9C0B6 783 aa7.06□□□□□ -1.28
ECHDC1-222ENST00000531967 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 SPOCK3Q9BQ16 436 aa7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 LONRF3Q496Y0 759 aa7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 ZNF710Q8N1W2 664 aa7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 GJD4Q96KN9 370 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-222ENST00000531967 AP1G2O75843 785 aa7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 ATP2B1P20020 1258 aa7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 IQSEC3Q9UPP2 1182 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 USP17L8P0C7I0 530 aa7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 DIXDC1Q155Q3 683 aa7.04□□□□□ -1.28
ECHDC1-222ENST00000531967 GPR37L1O60883 481 aa7.03□□□□□ -1.28
ECHDC1-222ENST00000531967 FAM9BQ8IZU0 186 aa7.03□□□□□ -1.28
ECHDC1-222ENST00000531967 ZCRB1Q8TBF4 217 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-222ENST00000531967 PRR7Q8TB68 274 aa7.03□□□□□ -1.28
ECHDC1-222ENST00000531967 L3MBTL3Q96JM7 780 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-222ENST00000531967 SH3BP5O60239 455 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 DSG2Q14126 1118 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 TBC1D9Q6ZT07 1266 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 RIC3Q7Z5B4 369 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 ARMC5Q96C12 935 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 SLAIN2Q9P270 581 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 APLP1P51693 650 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 SLC43A3Q8NBI5 491 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 ZSWIM4Q9H7M6 989 aa7.02□□□□□ -1.29
ECHDC1-222ENST00000531967 PAX3P23760 479 aa7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 ZFYVE27Q5T4F4 411 aa7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 KANK4Q5T7N3 995 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 NOVA2Q9UNW9 492 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 MCCP23508 829 aa7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 PMFBP1Q8TBY8 1022 aa7.01□□□□□ -1.29
ECHDC1-222ENST00000531967 FOXD4Q12950 439 aaPredicted RBP7□□□□□ -1.29
ECHDC1-222ENST00000531967 MRPL58Q14197 206 aaKnown RBP7□□□□□ -1.29
ECHDC1-222ENST00000531967 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 GRIPAP1Q4V328 841 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 CCDC146Q8IYE0 955 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 PLEKHG6Q3KR16 790 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 RNF187Q5TA31 235 aaPredicted RBP7□□□□□ -1.29
ECHDC1-222ENST00000531967 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 NT5DC4Q86YG4 428 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 DDX12PQ92771 950 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 MAF1Q9H063 256 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 TSPYL2Q9H2G4 693 aaPredicted RBP7□□□□□ -1.29
ECHDC1-222ENST00000531967 NLRP2Q9NX02 1062 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 PNMA2Q9UL42 364 aa7□□□□□ -1.29
ECHDC1-222ENST00000531967 TSHZ1Q6ZSZ6 1077 aa6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 CCAR1Q8IX12 1150 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 NLRP7Q8WX94 980 aa6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 IRF2BPLQ9H1B7 796 aa6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 ATP9BO43861 1147 aa6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 LDLRAD1Q5T700 205 aa6.99□□□□□ -1.29
ECHDC1-222ENST00000531967 QPCTQ16769 361 aa6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 FAM43BQ6ZT52 329 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 METTL16Q86W50 562 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 CAPN10Q9HC96 672 aa6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 PTGER2P43116 358 aa6.98□□□□□ -1.29
ECHDC1-222ENST00000531967 SOX11P35716 441 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms