RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 TREML4Q6UXN2 200 aa12.42□□□□□ -0.42
CASP4-210ENST00000531546 CD46P15529 392 aa12.41□□□□□ -0.42
CASP4-210ENST00000531546 WNT7AO00755 349 aa12.4□□□□□ -0.42
CASP4-210ENST00000531546 MMP16P51512 607 aa12.4□□□□□ -0.42
CASP4-210ENST00000531546 MAP2K5Q13163 448 aa12.4□□□□□ -0.42
CASP4-210ENST00000531546 TRIM32Q13049 653 aa12.39□□□□□ -0.43
CASP4-210ENST00000531546 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 TULP1O00294 542 aaPredicted RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 KDM4AO75164 1064 aa12.37□□□□□ -0.43
CASP4-210ENST00000531546 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
CASP4-210ENST00000531546 DACH1Q9UI36 760 aa12.37□□□□□ -0.43
CASP4-210ENST00000531546 USP46P62068 366 aa12.36□□□□□ -0.43
CASP4-210ENST00000531546 LCE2AQ5TA79 106 aaPredicted RBP12.35□□□□□ -0.43
CASP4-210ENST00000531546 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
CASP4-210ENST00000531546 SMPD1P17405 629 aa12.32□□□□□ -0.44
CASP4-210ENST00000531546 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
CASP4-210ENST00000531546 MRGPRX2Q96LB1 330 aa12.32□□□□□ -0.44
CASP4-210ENST00000531546 WFS1O76024 890 aa12.31□□□□□ -0.44
CASP4-210ENST00000531546 IRF6O14896 467 aa12.3□□□□□ -0.44
CASP4-210ENST00000531546 HOXA2O43364 376 aa12.29□□□□□ -0.44
CASP4-210ENST00000531546 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
CASP4-210ENST00000531546 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
CASP4-210ENST00000531546 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
CASP4-210ENST00000531546 ATP13A2Q9NQ11 1180 aa12.28□□□□□ -0.44
CASP4-210ENST00000531546 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
CASP4-210ENST00000531546 WNT7BP56706 349 aa12.27□□□□□ -0.45
CASP4-210ENST00000531546 J3QL48 77 aa12.26□□□□□ -0.45
CASP4-210ENST00000531546 CLCN1P35523 988 aa12.24□□□□□ -0.45
CASP4-210ENST00000531546 HLA-CQ95604 372 aa12.24□□□□□ -0.45
CASP4-210ENST00000531546 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
CASP4-210ENST00000531546 JUNDP17535 347 aa12.23□□□□□ -0.45
CASP4-210ENST00000531546 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
CASP4-210ENST00000531546 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
CASP4-210ENST00000531546 CCDC102AQ96A19 550 aa12.23□□□□□ -0.45
CASP4-210ENST00000531546 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
CASP4-210ENST00000531546 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
CASP4-210ENST00000531546 SKOR1P84550 965 aa12.2□□□□□ -0.46
CASP4-210ENST00000531546 HPS1Q92902 700 aa12.2□□□□□ -0.46
CASP4-210ENST00000531546 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
CASP4-210ENST00000531546 WIPF1O43516 503 aa12.19□□□□□ -0.46
CASP4-210ENST00000531546 INSM1Q01101 510 aaPredicted RBP12.19□□□□□ -0.46
CASP4-210ENST00000531546 GUCA2AQ02747 115 aa12.19□□□□□ -0.46
CASP4-210ENST00000531546 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
CASP4-210ENST00000531546 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
CASP4-210ENST00000531546 FAM217BQ9NTX9 383 aaPredicted RBP12.19□□□□□ -0.46
CASP4-210ENST00000531546 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
CASP4-210ENST00000531546 SNRPBP14678 240 aaKnown RBP12.17□□□□□ -0.46
CASP4-210ENST00000531546 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
CASP4-210ENST00000531546 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
CASP4-210ENST00000531546 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
CASP4-210ENST00000531546 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
CASP4-210ENST00000531546 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
CASP4-210ENST00000531546 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
CASP4-210ENST00000531546 FDX1P10109 184 aa12.11□□□□□ -0.47
CASP4-210ENST00000531546 C6orf229H3BNL8 230 aa12.1□□□□□ -0.47
CASP4-210ENST00000531546 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
CASP4-210ENST00000531546 WASF2Q9Y6W5 498 aa12.1□□□□□ -0.47
CASP4-210ENST00000531546 MS4A1P11836 297 aa12.09□□□□□ -0.47
CASP4-210ENST00000531546 VSIG10Q8N0Z9 540 aa12.09□□□□□ -0.47
CASP4-210ENST00000531546 SIAH2O43255 324 aa12.07□□□□□ -0.48
CASP4-210ENST00000531546 PTPRNQ16849 979 aa12.07□□□□□ -0.48
CASP4-210ENST00000531546 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
CASP4-210ENST00000531546 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
CASP4-210ENST00000531546 CAPN5O15484 640 aaPredicted RBP12.05□□□□□ -0.48
CASP4-210ENST00000531546 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
CASP4-210ENST00000531546 SH3BP2P78314 561 aa12.04□□□□□ -0.48
CASP4-210ENST00000531546 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
CASP4-210ENST00000531546 SSTR3P32745 418 aaPredicted RBP12.03□□□□□ -0.48
CASP4-210ENST00000531546 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
CASP4-210ENST00000531546 BMP1P13497 986 aa12.02□□□□□ -0.49
CASP4-210ENST00000531546 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
CASP4-210ENST00000531546 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
CASP4-210ENST00000531546 NPAS3Q8IXF0 933 aa12.01□□□□□ -0.49
CASP4-210ENST00000531546 EVA1BQ9NVM1 165 aa12.01□□□□□ -0.49
CASP4-210ENST00000531546 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
CASP4-210ENST00000531546 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CASP4-210ENST00000531546 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
CASP4-210ENST00000531546 KCNH2Q12809 1159 aa11.99□□□□□ -0.49
CASP4-210ENST00000531546 MTMR2Q13614 643 aa11.99□□□□□ -0.49
CASP4-210ENST00000531546 DESI1Q6ICB0 168 aa11.99□□□□□ -0.49
CASP4-210ENST00000531546 TRIM46Q7Z4K8 759 aa11.99□□□□□ -0.49
CASP4-210ENST00000531546 FAM181BA6NEQ2 426 aa11.98□□□□□ -0.49
CASP4-210ENST00000531546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
CASP4-210ENST00000531546 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
CASP4-210ENST00000531546 NDUFV2P19404 249 aa11.97□□□□□ -0.49
CASP4-210ENST00000531546 VARSP26640 1264 aaKnown RBP11.97□□□□□ -0.49
CASP4-210ENST00000531546 LINC01559Q495D7 138 aa11.97□□□□□ -0.49
CASP4-210ENST00000531546 ZNF511Q8NB15 262 aa11.97□□□□□ -0.49
CASP4-210ENST00000531546 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
CASP4-210ENST00000531546 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
CASP4-210ENST00000531546 MPNDQ8N594 471 aa11.96□□□□□ -0.49
CASP4-210ENST00000531546 BAP1Q92560 729 aa11.96□□□□□ -0.49
CASP4-210ENST00000531546 IRF7Q92985 503 aa11.96□□□□□ -0.49
CASP4-210ENST00000531546 AMHR2Q16671 573 aa11.95□□□□□ -0.5
CASP4-210ENST00000531546 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
CASP4-210ENST00000531546 GJA5P36382 358 aa11.93□□□□□ -0.5
CASP4-210ENST00000531546 NNTQ13423 1086 aa11.93□□□□□ -0.5
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