RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 AAASQ9NRG9 546 aa10.37□□□□□ -0.75
USP47-211ENST00000531513 KDM4AO75164 1064 aa10.36□□□□□ -0.75
USP47-211ENST00000531513 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
USP47-211ENST00000531513 TOR4AQ9NXH8 423 aa10.36□□□□□ -0.75
USP47-211ENST00000531513 MINK1Q8N4C8 1332 aaPredicted RBP10.35□□□□□ -0.75
USP47-211ENST00000531513 HLA-CQ95604 372 aa10.35□□□□□ -0.75
USP47-211ENST00000531513 MMP16P51512 607 aa10.34□□□□□ -0.75
USP47-211ENST00000531513 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
USP47-211ENST00000531513 ZBTB24O43167 697 aaPredicted RBP10.33□□□□□ -0.76
USP47-211ENST00000531513 HOXA2O43364 376 aa10.32□□□□□ -0.76
USP47-211ENST00000531513 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
USP47-211ENST00000531513 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
USP47-211ENST00000531513 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
USP47-211ENST00000531513 DXOO77932 396 aaKnown RBP10.31□□□□□ -0.76
USP47-211ENST00000531513 USP46P62068 366 aa10.31□□□□□ -0.76
USP47-211ENST00000531513 TRIM32Q13049 653 aa10.31□□□□□ -0.76
USP47-211ENST00000531513 AVPP01185 164 aa10.3□□□□□ -0.76
USP47-211ENST00000531513 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
USP47-211ENST00000531513 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
USP47-211ENST00000531513 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
USP47-211ENST00000531513 WNT7AO00755 349 aa10.28□□□□□ -0.76
USP47-211ENST00000531513 CLCN1P35523 988 aa10.28□□□□□ -0.76
USP47-211ENST00000531513 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
USP47-211ENST00000531513 TTC24A2A3L6 582 aaPredicted RBP10.27□□□□□ -0.77
USP47-211ENST00000531513 AXIN1O15169 862 aa10.26□□□□□ -0.77
USP47-211ENST00000531513 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
USP47-211ENST00000531513 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
USP47-211ENST00000531513 SMPD1P17405 629 aa10.24□□□□□ -0.77
USP47-211ENST00000531513 CTC1Q2NKJ3 1217 aa10.24□□□□□ -0.77
USP47-211ENST00000531513 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
USP47-211ENST00000531513 SNIP1Q8TAD8 396 aaKnown RBP10.24□□□□□ -0.77
USP47-211ENST00000531513 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
USP47-211ENST00000531513 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
USP47-211ENST00000531513 GMPR2Q9P2T1 348 aaKnown RBP10.23□□□□□ -0.77
USP47-211ENST00000531513 JUNDP17535 347 aa10.22□□□□□ -0.77
USP47-211ENST00000531513 NUTM1Q86Y26 1132 aa10.22□□□□□ -0.77
USP47-211ENST00000531513 KRI1Q8N9T8 703 aaKnown RBP10.22□□□□□ -0.77
USP47-211ENST00000531513 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
USP47-211ENST00000531513 J3QL48 77 aa10.2□□□□□ -0.78
USP47-211ENST00000531513 SKOR1P84550 965 aa10.2□□□□□ -0.78
USP47-211ENST00000531513 RETREG3Q86VR2 466 aa10.19□□□□□ -0.78
USP47-211ENST00000531513 WNT7BP56706 349 aa10.18□□□□□ -0.78
USP47-211ENST00000531513 RC3H1Q5TC82 1133 aaKnown RBP10.18□□□□□ -0.78
USP47-211ENST00000531513 PCDHGC3Q9UN70 934 aa10.18□□□□□ -0.78
USP47-211ENST00000531513 C11orf95C9JLR9 678 aaPredicted RBP10.17□□□□□ -0.78
USP47-211ENST00000531513 FDX1P10109 184 aa10.17□□□□□ -0.78
USP47-211ENST00000531513 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
USP47-211ENST00000531513 SSTR3P32745 418 aaPredicted RBP10.15□□□□□ -0.78
USP47-211ENST00000531513 HPS1Q92902 700 aa10.15□□□□□ -0.78
USP47-211ENST00000531513 ATP13A2Q9NQ11 1180 aa10.15□□□□□ -0.78
USP47-211ENST00000531513 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
USP47-211ENST00000531513 TTLL12Q14166 644 aaPredicted RBP10.14□□□□□ -0.79
USP47-211ENST00000531513 PTCRAQ6ISU1 281 aaPredicted RBP10.14□□□□□ -0.79
USP47-211ENST00000531513 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
USP47-211ENST00000531513 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
USP47-211ENST00000531513 WFS1O76024 890 aa10.13□□□□□ -0.79
USP47-211ENST00000531513 NFX1Q12986 1120 aaKnown RBP10.13□□□□□ -0.79
USP47-211ENST00000531513 ZMYND10O75800 440 aa10.12□□□□□ -0.79
USP47-211ENST00000531513 NDUFV2P19404 249 aa10.12□□□□□ -0.79
USP47-211ENST00000531513 AMHR2Q16671 573 aa10.12□□□□□ -0.79
USP47-211ENST00000531513 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
USP47-211ENST00000531513 WIPF1O43516 503 aa10.11□□□□□ -0.79
USP47-211ENST00000531513 ALDH1A1P00352 501 aa10.11□□□□□ -0.79
USP47-211ENST00000531513 MS4A1P11836 297 aa10.11□□□□□ -0.79
USP47-211ENST00000531513 GIGYF2Q6Y7W6 1299 aaKnown RBP10.11□□□□□ -0.79
USP47-211ENST00000531513 CCNYL3P0C7X3 344 aa10.1□□□□□ -0.79
USP47-211ENST00000531513 SNRPBP14678 240 aaKnown RBP10.1□□□□□ -0.79
USP47-211ENST00000531513 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
USP47-211ENST00000531513 STK17AQ9UEE5 414 aa10.1□□□□□ -0.79
USP47-211ENST00000531513 PTPRNQ16849 979 aa10.08□□□□□ -0.8
USP47-211ENST00000531513 LCE2CQ5TA81 110 aa10.08□□□□□ -0.8
USP47-211ENST00000531513 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
USP47-211ENST00000531513 TRIM47Q96LD4 638 aa10.08□□□□□ -0.8
USP47-211ENST00000531513 SIAH2O43255 324 aa10.07□□□□□ -0.8
USP47-211ENST00000531513 SH3BP2P78314 561 aa10.06□□□□□ -0.8
USP47-211ENST00000531513 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
USP47-211ENST00000531513 SENP2Q9HC62 589 aa10.06□□□□□ -0.8
USP47-211ENST00000531513 MTMR2Q13614 643 aa10.05□□□□□ -0.8
USP47-211ENST00000531513 BEGAINQ9BUH8 593 aa10.05□□□□□ -0.8
USP47-211ENST00000531513 UNC93B1Q9H1C4 597 aa10.05□□□□□ -0.8
USP47-211ENST00000531513 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
USP47-211ENST00000531513 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
USP47-211ENST00000531513 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
USP47-211ENST00000531513 KCNH2Q12809 1159 aa10.02□□□□□ -0.81
USP47-211ENST00000531513 KIFC2Q96AC6 838 aa10.02□□□□□ -0.81
USP47-211ENST00000531513 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
USP47-211ENST00000531513 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
USP47-211ENST00000531513 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
USP47-211ENST00000531513 BMP1P13497 986 aa10.01□□□□□ -0.81
USP47-211ENST00000531513 INSM1Q01101 510 aaPredicted RBP10.01□□□□□ -0.81
USP47-211ENST00000531513 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
USP47-211ENST00000531513 RSBN1LQ6PCB5 846 aaPredicted RBP10.01□□□□□ -0.81
USP47-211ENST00000531513 BAP1Q92560 729 aa10.01□□□□□ -0.81
USP47-211ENST00000531513 TLL2Q9Y6L7 1015 aa10□□□□□ -0.81
USP47-211ENST00000531513 TERTO14746 1132 aaKnown RBP9.99□□□□□ -0.81
USP47-211ENST00000531513 GJA5P36382 358 aa9.99□□□□□ -0.81
USP47-211ENST00000531513 ZNF511Q8NB15 262 aa9.99□□□□□ -0.81
USP47-211ENST00000531513 TRIM66O15016 1216 aa9.98□□□□□ -0.81
USP47-211ENST00000531513 CAPN5O15484 640 aaPredicted RBP9.98□□□□□ -0.81
USP47-211ENST00000531513 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms