RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NKTRP30414 1462 aaKnown RBP22.57■■□□□ 1.2
BRCA2-204ENST00000530893 CGNL1Q0VF96 1302 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 APAF1O14727 1248 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 MS4A1P11836 297 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 ANKRD36BQ8N2N9 1353 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 NINLQ9Y2I6 1382 aa22.57■■□□□ 1.2
BRCA2-204ENST00000530893 E9PSI1 815 aa22.56■■□□□ 1.2
BRCA2-204ENST00000530893 REREQ9P2R6 1566 aa22.56■■□□□ 1.2
BRCA2-204ENST00000530893 SHPRHQ149N8 1683 aa22.56■■□□□ 1.2
BRCA2-204ENST00000530893 CCDC146Q8IYE0 955 aa22.55■■□□□ 1.2
BRCA2-204ENST00000530893 MYO5BQ9ULV0 1848 aa22.53■■□□□ 1.2
BRCA2-204ENST00000530893 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
BRCA2-204ENST00000530893 DIP2BQ9P265 1576 aa22.52■■□□□ 1.2
BRCA2-204ENST00000530893 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.19
BRCA2-204ENST00000530893 AGLP35573 1532 aa22.51■■□□□ 1.19
BRCA2-204ENST00000530893 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
BRCA2-204ENST00000530893 NCBP3Q53F19 620 aaKnown RBP22.48■■□□□ 1.19
BRCA2-204ENST00000530893 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
BRCA2-204ENST00000530893 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
BRCA2-204ENST00000530893 C20orf194Q5TEA3 1177 aa22.47■■□□□ 1.19
BRCA2-204ENST00000530893 CLTCQ00610 1675 aaKnown RBP22.47■■□□□ 1.19
BRCA2-204ENST00000530893 PTPRMP28827 1452 aa22.47■■□□□ 1.19
BRCA2-204ENST00000530893 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
BRCA2-204ENST00000530893 ATAD2Q6PL18 1390 aa22.45■■□□□ 1.19
BRCA2-204ENST00000530893 WWC1Q8IX03 1113 aa22.45■■□□□ 1.18
BRCA2-204ENST00000530893 IQSEC2Q5JU85 1478 aa22.45■■□□□ 1.18
BRCA2-204ENST00000530893 FAM69CQ0P6D2 419 aa22.45■■□□□ 1.18
BRCA2-204ENST00000530893 CENPQQ7L2Z9 268 aaPredicted RBP22.45■■□□□ 1.18
BRCA2-204ENST00000530893 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
BRCA2-204ENST00000530893 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
BRCA2-204ENST00000530893 IPO9Q96P70 1041 aaKnown RBP22.44■■□□□ 1.18
BRCA2-204ENST00000530893 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
BRCA2-204ENST00000530893 ABCC11Q96J66 1382 aa22.44■■□□□ 1.18
BRCA2-204ENST00000530893 YTHDC2Q9H6S0 1430 aaKnown RBP22.43■■□□□ 1.18
BRCA2-204ENST00000530893 MTHFSP49914 203 aa22.43■■□□□ 1.18
BRCA2-204ENST00000530893 PDE4AP27815 886 aa22.42■■□□□ 1.18
BRCA2-204ENST00000530893 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
BRCA2-204ENST00000530893 CABP2Q9NPB3 220 aa22.42■■□□□ 1.18
BRCA2-204ENST00000530893 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
BRCA2-204ENST00000530893 BACH2Q9BYV9 841 aa22.41■■□□□ 1.18
BRCA2-204ENST00000530893 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
BRCA2-204ENST00000530893 MED14O60244 1454 aa22.41■■□□□ 1.18
BRCA2-204ENST00000530893 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
BRCA2-204ENST00000530893 A0A1W2PP64 1363 aa22.4■■□□□ 1.18
BRCA2-204ENST00000530893 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
BRCA2-204ENST00000530893 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.17
BRCA2-204ENST00000530893 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.17
BRCA2-204ENST00000530893 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
BRCA2-204ENST00000530893 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
BRCA2-204ENST00000530893 TERF2IPQ9NYB0 399 aa22.38■■□□□ 1.17
BRCA2-204ENST00000530893 TCP11L2Q8N4U5 519 aa22.37■■□□□ 1.17
BRCA2-204ENST00000530893 STK26Q9P289 416 aa22.37■■□□□ 1.17
BRCA2-204ENST00000530893 FBXO31Q5XUX0 539 aaPredicted RBP22.36■■□□□ 1.17
BRCA2-204ENST00000530893 DMRT2Q9Y5R5 561 aa22.36■■□□□ 1.17
BRCA2-204ENST00000530893 TSPOAP1O95153 1857 aa22.36■■□□□ 1.17
BRCA2-204ENST00000530893 DLC1Q96QB1 1528 aa22.36■■□□□ 1.17
BRCA2-204ENST00000530893 PRAM1Q96QH2 718 aa22.36■■□□□ 1.17
BRCA2-204ENST00000530893 POGKQ9P215 609 aa22.35■■□□□ 1.17
BRCA2-204ENST00000530893 ADGRB2O60241 1585 aa22.35■■□□□ 1.17
BRCA2-204ENST00000530893 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
BRCA2-204ENST00000530893 SAFB2Q14151 953 aaKnown RBP eCLIP22.34■■□□□ 1.17
BRCA2-204ENST00000530893 BCAR3O75815 825 aa22.33■■□□□ 1.17
BRCA2-204ENST00000530893 A2ML1A8K2U0 1454 aa22.33■■□□□ 1.17
BRCA2-204ENST00000530893 ZBTB47Q9UFB7 747 aaPredicted RBP22.33■■□□□ 1.16
BRCA2-204ENST00000530893 CD163L1Q9NR16 1453 aa22.33■■□□□ 1.16
BRCA2-204ENST00000530893 ARHGEF40Q8TER5 1519 aa22.33■■□□□ 1.16
BRCA2-204ENST00000530893 MINK1Q8N4C8 1332 aaPredicted RBP22.3■■□□□ 1.16
BRCA2-204ENST00000530893 AAMPQ13685 434 aa22.3■■□□□ 1.16
BRCA2-204ENST00000530893 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
BRCA2-204ENST00000530893 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
BRCA2-204ENST00000530893 SETD1AO15047 1707 aaKnown RBP22.29■■□□□ 1.16
BRCA2-204ENST00000530893 U2AF1L5P0DN76 240 aaPredicted RBP22.28■■□□□ 1.16
BRCA2-204ENST00000530893 U2AF1Q01081 240 aaKnown RBP eCLIP22.28■■□□□ 1.16
BRCA2-204ENST00000530893 MYH16Q9H6N6 1097 aa22.28■■□□□ 1.16
BRCA2-204ENST00000530893 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
BRCA2-204ENST00000530893 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
BRCA2-204ENST00000530893 FYB1O15117 783 aa22.27■■□□□ 1.16
BRCA2-204ENST00000530893 RIMS2Q9UQ26 1411 aa22.27■■□□□ 1.16
BRCA2-204ENST00000530893 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.16
BRCA2-204ENST00000530893 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
BRCA2-204ENST00000530893 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
BRCA2-204ENST00000530893 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
BRCA2-204ENST00000530893 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
BRCA2-204ENST00000530893 RARSP54136 660 aaKnown RBP22.25■■□□□ 1.15
BRCA2-204ENST00000530893 ATP7BP35670 1465 aa22.25■■□□□ 1.15
BRCA2-204ENST00000530893 CT47B1P0C2W7 299 aaPredicted RBP22.24■■□□□ 1.15
BRCA2-204ENST00000530893 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
BRCA2-204ENST00000530893 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
BRCA2-204ENST00000530893 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.23■■□□□ 1.15
BRCA2-204ENST00000530893 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
BRCA2-204ENST00000530893 CLUAP1Q96AJ1 413 aa22.21■■□□□ 1.15
BRCA2-204ENST00000530893 PLEKHF1Q96S99 279 aa22.21■■□□□ 1.15
BRCA2-204ENST00000530893 FAM161AQ3B820 660 aa22.2■■□□□ 1.14
BRCA2-204ENST00000530893 NPM2Q86SE8 214 aaKnown RBP22.2■■□□□ 1.14
BRCA2-204ENST00000530893 DDRGK1Q96HY6 314 aa22.19■■□□□ 1.14
BRCA2-204ENST00000530893 CABP1Q9NZU7 370 aa22.19■■□□□ 1.14
BRCA2-204ENST00000530893 CDC42BPGQ6DT37 1551 aa22.19■■□□□ 1.14
BRCA2-204ENST00000530893 NRXN3Q9Y4C0 1643 aa22.19■■□□□ 1.14
BRCA2-204ENST00000530893 MAPK8IP3Q9UPT6 1336 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms