RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 PRAM1Q96QH2 718 aa15.67■□□□□ 0.1
CAPN1-218ENST00000530442 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
CAPN1-218ENST00000530442 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
CAPN1-218ENST00000530442 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
CAPN1-218ENST00000530442 MST1RQ04912 1400 aa15.63■□□□□ 0.09
CAPN1-218ENST00000530442 SAFB2Q14151 953 aaKnown RBP eCLIP15.63■□□□□ 0.09
CAPN1-218ENST00000530442 C19orf44Q9H6X5 657 aa15.63■□□□□ 0.09
CAPN1-218ENST00000530442 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
CAPN1-218ENST00000530442 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
CAPN1-218ENST00000530442 POGKQ9P215 609 aa15.62■□□□□ 0.09
CAPN1-218ENST00000530442 RGPD8O14715 1765 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-218ENST00000530442 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
CAPN1-218ENST00000530442 TULP4Q9NRJ4 1543 aa15.61■□□□□ 0.09
CAPN1-218ENST00000530442 CENPJQ9HC77 1338 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-218ENST00000530442 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
CAPN1-218ENST00000530442 TOM1O60784 492 aa15.59■□□□□ 0.09
CAPN1-218ENST00000530442 CADPS2Q86UW7 1296 aa15.59■□□□□ 0.09
CAPN1-218ENST00000530442 MINK1Q8N4C8 1332 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-218ENST00000530442 USP47Q96K76 1375 aa15.59■□□□□ 0.09
CAPN1-218ENST00000530442 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
CAPN1-218ENST00000530442 ITSN1Q15811 1721 aa15.58■□□□□ 0.08
CAPN1-218ENST00000530442 ATF3P18847 181 aa15.58■□□□□ 0.08
CAPN1-218ENST00000530442 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-218ENST00000530442 FBXO41Q8TF61 875 aa15.57■□□□□ 0.08
CAPN1-218ENST00000530442 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
CAPN1-218ENST00000530442 ATP7BP35670 1465 aa15.57■□□□□ 0.08
CAPN1-218ENST00000530442 NHSL1Q5SYE7 1610 aa15.57■□□□□ 0.08
CAPN1-218ENST00000530442 KIF1AQ12756 1690 aa15.56■□□□□ 0.08
CAPN1-218ENST00000530442 ANKARQ7Z5J8 1434 aa15.55■□□□□ 0.08
CAPN1-218ENST00000530442 AHDC1Q5TGY3 1603 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-218ENST00000530442 PIP4K2BP78356 416 aa15.54■□□□□ 0.08
CAPN1-218ENST00000530442 SLAIN2Q9P270 581 aa15.54■□□□□ 0.08
CAPN1-218ENST00000530442 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-218ENST00000530442 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
CAPN1-218ENST00000530442 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
CAPN1-218ENST00000530442 NUTM2FA1L443 756 aa15.52■□□□□ 0.08
CAPN1-218ENST00000530442 COL16A1Q07092 1604 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-218ENST00000530442 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
CAPN1-218ENST00000530442 ST20-MTHFSA0A0A6YYL1 179 aa15.51■□□□□ 0.07
CAPN1-218ENST00000530442 BRINP3Q76B58 766 aa15.51■□□□□ 0.07
CAPN1-218ENST00000530442 TESK2Q96S53 571 aa15.5■□□□□ 0.07
CAPN1-218ENST00000530442 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
CAPN1-218ENST00000530442 ORAI2Q96SN7 254 aa15.48■□□□□ 0.07
CAPN1-218ENST00000530442 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
CAPN1-218ENST00000530442 DISP3Q9P2K9 1392 aa15.47■□□□□ 0.07
CAPN1-218ENST00000530442 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
CAPN1-218ENST00000530442 ESCO1Q5FWF5 840 aa15.46■□□□□ 0.07
CAPN1-218ENST00000530442 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
CAPN1-218ENST00000530442 MYOM1P52179 1685 aa15.46■□□□□ 0.07
CAPN1-218ENST00000530442 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
CAPN1-218ENST00000530442 PXDNQ92626 1479 aa15.46■□□□□ 0.06
CAPN1-218ENST00000530442 TRPM3Q9HCF6 1732 aaPredicted RBP15.46■□□□□ 0.06
CAPN1-218ENST00000530442 EIF4G2P78344 907 aaKnown RBP eCLIP15.45■□□□□ 0.06
CAPN1-218ENST00000530442 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
CAPN1-218ENST00000530442 ILDR1Q86SU0 546 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-218ENST00000530442 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
CAPN1-218ENST00000530442 PPIP5K1Q6PFW1 1433 aa15.44■□□□□ 0.06
CAPN1-218ENST00000530442 HSPA1LP34931 641 aa15.43■□□□□ 0.06
CAPN1-218ENST00000530442 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
CAPN1-218ENST00000530442 ATAD2Q6PL18 1390 aa15.43■□□□□ 0.06
CAPN1-218ENST00000530442 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
CAPN1-218ENST00000530442 SHPRHQ149N8 1683 aa15.42■□□□□ 0.06
CAPN1-218ENST00000530442 NRKQ7Z2Y5 1582 aa15.42■□□□□ 0.06
CAPN1-218ENST00000530442 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
CAPN1-218ENST00000530442 PMFBP1Q8TBY8 1022 aa15.41■□□□□ 0.06
CAPN1-218ENST00000530442 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-218ENST00000530442 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-218ENST00000530442 TMF1P82094 1093 aa15.4■□□□□ 0.06
CAPN1-218ENST00000530442 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
CAPN1-218ENST00000530442 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
CAPN1-218ENST00000530442 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
CAPN1-218ENST00000530442 CD163L1Q9NR16 1453 aa15.4■□□□□ 0.06
CAPN1-218ENST00000530442 FOXO3O43524 673 aa15.39■□□□□ 0.05
CAPN1-218ENST00000530442 SOS2Q07890 1332 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-218ENST00000530442 COL22A1Q8NFW1 1626 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-218ENST00000530442 SLC24A1O60721 1099 aa15.38■□□□□ 0.05
CAPN1-218ENST00000530442 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
CAPN1-218ENST00000530442 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
CAPN1-218ENST00000530442 XPCQ01831 940 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-218ENST00000530442 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
CAPN1-218ENST00000530442 CABP1Q9NZU7 370 aa15.36■□□□□ 0.05
CAPN1-218ENST00000530442 CRYBG1Q9Y4K1 1723 aa15.36■□□□□ 0.05
CAPN1-218ENST00000530442 ACEP12821 1306 aa15.36■□□□□ 0.05
CAPN1-218ENST00000530442 NINLQ9Y2I6 1382 aa15.36■□□□□ 0.05
CAPN1-218ENST00000530442 CPSF1Q10570 1443 aaKnown RBP15.35■□□□□ 0.05
CAPN1-218ENST00000530442 TNS3Q68CZ2 1445 aa15.35■□□□□ 0.05
CAPN1-218ENST00000530442 USP6P35125 1406 aa15.34■□□□□ 0.05
CAPN1-218ENST00000530442 NGDNQ8NEJ9 315 aaKnown RBP15.34■□□□□ 0.05
CAPN1-218ENST00000530442 PIK3C2AO00443 1686 aa15.34■□□□□ 0.05
CAPN1-218ENST00000530442 SBNO1A3KN83 1393 aa15.34■□□□□ 0.05
CAPN1-218ENST00000530442 PNPLA6Q8IY17 1366 aa15.34■□□□□ 0.05
CAPN1-218ENST00000530442 MED1Q15648 1581 aaPredicted RBP15.33■□□□□ 0.05
CAPN1-218ENST00000530442 C11orf95C9JLR9 678 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-218ENST00000530442 CDCA8Q53HL2 280 aa15.33■□□□□ 0.04
CAPN1-218ENST00000530442 MARF1Q9Y4F3 1742 aaKnown RBP15.33■□□□□ 0.04
CAPN1-218ENST00000530442 A0A1W2PP64 1363 aa15.33■□□□□ 0.04
CAPN1-218ENST00000530442 JCADQ9P266 1359 aa15.33■□□□□ 0.04
CAPN1-218ENST00000530442 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
CAPN1-218ENST00000530442 SSH2Q76I76 1423 aa15.32■□□□□ 0.04
CAPN1-218ENST00000530442 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms